RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 APLP1P51693 650 aa9.73□□□□□ -0.85
SCARB2-206ENST00000638175 SWT1Q5T5J6 900 aaKnown RBP9.73□□□□□ -0.85
SCARB2-206ENST00000638175 EYA1Q99502 592 aa9.73□□□□□ -0.85
SCARB2-206ENST00000638175 PLCH2O75038 1416 aa9.73□□□□□ -0.85
SCARB2-206ENST00000638175 OATP04181 439 aa9.72□□□□□ -0.85
SCARB2-206ENST00000638175 HDGFP51858 240 aaKnown RBP9.72□□□□□ -0.85
SCARB2-206ENST00000638175 METTL3Q86U44 580 aaKnown RBP9.72□□□□□ -0.85
SCARB2-206ENST00000638175 PXYLP1Q8TE99 480 aa9.72□□□□□ -0.85
SCARB2-206ENST00000638175 MTRQ99707 1265 aa9.72□□□□□ -0.85
SCARB2-206ENST00000638175 ZNF516Q92618 1163 aa9.71□□□□□ -0.86
SCARB2-206ENST00000638175 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
SCARB2-206ENST00000638175 NCOA2Q15596 1464 aa9.71□□□□□ -0.86
SCARB2-206ENST00000638175 ABCC1P33527 1531 aa9.71□□□□□ -0.86
SCARB2-206ENST00000638175 FRMPD1Q5SYB0 1578 aa9.71□□□□□ -0.86
SCARB2-206ENST00000638175 SAMD9LQ8IVG5 1584 aa9.7□□□□□ -0.86
SCARB2-206ENST00000638175 ADGRL1O94910 1474 aa9.69□□□□□ -0.86
SCARB2-206ENST00000638175 ZMYM4Q5VZL5 1548 aa9.69□□□□□ -0.86
SCARB2-206ENST00000638175 GIGYF2Q6Y7W6 1299 aaKnown RBP9.69□□□□□ -0.86
SCARB2-206ENST00000638175 REPIN1Q9BWE0 567 aaKnown RBP9.69□□□□□ -0.86
SCARB2-206ENST00000638175 IL21Q9HBE4 155 aa9.69□□□□□ -0.86
SCARB2-206ENST00000638175 GPATCH8Q9UKJ3 1502 aaKnown RBP9.69□□□□□ -0.86
SCARB2-206ENST00000638175 GTF3C3Q9Y5Q9 886 aa9.69□□□□□ -0.86
SCARB2-206ENST00000638175 PLEKHH2Q8IVE3 1493 aa9.68□□□□□ -0.86
SCARB2-206ENST00000638175 CLCN1P35523 988 aa9.68□□□□□ -0.86
SCARB2-206ENST00000638175 TTLL12Q14166 644 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-206ENST00000638175 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
SCARB2-206ENST00000638175 KDM5CP41229 1560 aa9.67□□□□□ -0.86
SCARB2-206ENST00000638175 AKNAQ7Z591 1439 aa9.67□□□□□ -0.86
SCARB2-206ENST00000638175 CCNB3Q8WWL7 1395 aa9.67□□□□□ -0.86
SCARB2-206ENST00000638175 FAM161AQ3B820 660 aa9.67□□□□□ -0.86
SCARB2-206ENST00000638175 FAM117AQ9C073 453 aa9.67□□□□□ -0.86
SCARB2-206ENST00000638175 GPCPD1Q9NPB8 672 aa9.67□□□□□ -0.86
SCARB2-206ENST00000638175 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
SCARB2-206ENST00000638175 SLF2Q8IX21 1173 aa9.66□□□□□ -0.86
SCARB2-206ENST00000638175 NKX2-3Q8TAU0 364 aa9.66□□□□□ -0.86
SCARB2-206ENST00000638175 CROCC2H7BZ55 1655 aa9.66□□□□□ -0.86
SCARB2-206ENST00000638175 HECW2Q9P2P5 1572 aa9.66□□□□□ -0.86
SCARB2-206ENST00000638175 ARHGEF40Q8TER5 1519 aa9.66□□□□□ -0.86
SCARB2-206ENST00000638175 DENND4BO75064 1496 aaPredicted RBP9.66□□□□□ -0.86
SCARB2-206ENST00000638175 ZNF518AQ6AHZ1 1483 aa9.66□□□□□ -0.86
SCARB2-206ENST00000638175 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
SCARB2-206ENST00000638175 POGZQ7Z3K3 1410 aa9.65□□□□□ -0.86
SCARB2-206ENST00000638175 MS4A1P11836 297 aa9.65□□□□□ -0.86
SCARB2-206ENST00000638175 RBM46Q8TBY0 533 aaKnown RBP9.65□□□□□ -0.86
SCARB2-206ENST00000638175 SYCP2Q9BX26 1530 aa9.65□□□□□ -0.86
SCARB2-206ENST00000638175 ARHGEF5Q12774 1597 aa9.64□□□□□ -0.87
SCARB2-206ENST00000638175 MDM2Q00987 491 aaPredicted RBP9.64□□□□□ -0.87
SCARB2-206ENST00000638175 EFCAB2Q5VUJ9 269 aa9.64□□□□□ -0.87
SCARB2-206ENST00000638175 PPP1R18Q6NYC8 613 aa9.64□□□□□ -0.87
SCARB2-206ENST00000638175 IL27Q8NEV9 243 aa9.64□□□□□ -0.87
SCARB2-206ENST00000638175 CAMSAP2Q08AD1 1489 aa9.64□□□□□ -0.87
SCARB2-206ENST00000638175 MYOM3Q5VTT5 1437 aa9.64□□□□□ -0.87
SCARB2-206ENST00000638175 MIA2Q96PC5 1412 aa9.64□□□□□ -0.87
SCARB2-206ENST00000638175 PTPN23Q9H3S7 1636 aa9.64□□□□□ -0.87
SCARB2-206ENST00000638175 INO80Q9ULG1 1556 aaPredicted RBP9.63□□□□□ -0.87
SCARB2-206ENST00000638175 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
SCARB2-206ENST00000638175 COPS2P61201 443 aa9.63□□□□□ -0.87
SCARB2-206ENST00000638175 MAGI2Q86UL8 1455 aa9.63□□□□□ -0.87
SCARB2-206ENST00000638175 KIAA1107Q9UPP5 1409 aa9.63□□□□□ -0.87
SCARB2-206ENST00000638175 KIDINS220Q9ULH0 1771 aa9.63□□□□□ -0.87
SCARB2-206ENST00000638175 ADGBQ8N7X0 1667 aa9.62□□□□□ -0.87
SCARB2-206ENST00000638175 FAM217BQ9NTX9 383 aaPredicted RBP9.62□□□□□ -0.87
SCARB2-206ENST00000638175 SCAPERQ9BY12 1400 aa9.62□□□□□ -0.87
SCARB2-206ENST00000638175 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
SCARB2-206ENST00000638175 DNAJB2P25686 324 aa9.61□□□□□ -0.87
SCARB2-206ENST00000638175 KANK4Q5T7N3 995 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-206ENST00000638175 NECTIN2Q92692 538 aa9.61□□□□□ -0.87
SCARB2-206ENST00000638175 DNMT1P26358 1616 aaKnown RBP9.6□□□□□ -0.87
SCARB2-206ENST00000638175 ABCA6Q8N139 1617 aa9.6□□□□□ -0.87
SCARB2-206ENST00000638175 REREQ9P2R6 1566 aa9.6□□□□□ -0.87
SCARB2-206ENST00000638175 PRKD2Q9BZL6 878 aa9.6□□□□□ -0.87
SCARB2-206ENST00000638175 TMEM134Q9H6X4 195 aa9.6□□□□□ -0.87
SCARB2-206ENST00000638175 GOPCQ9HD26 462 aa9.6□□□□□ -0.87
SCARB2-206ENST00000638175 CFDP1Q9UEE9 299 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-206ENST00000638175 ARHGEF12Q9NZN5 1544 aa9.6□□□□□ -0.87
SCARB2-206ENST00000638175 TCOF1Q13428 1488 aaKnown RBP9.59□□□□□ -0.87
SCARB2-206ENST00000638175 MLH3Q9UHC1 1453 aa9.59□□□□□ -0.87
SCARB2-206ENST00000638175 DIP2CQ9Y2E4 1556 aa9.59□□□□□ -0.87
SCARB2-206ENST00000638175 MAST1Q9Y2H9 1570 aa9.59□□□□□ -0.87
SCARB2-206ENST00000638175 FGD6Q6ZV73 1430 aa9.59□□□□□ -0.87
SCARB2-206ENST00000638175 RCCD1A6NED2 376 aa9.59□□□□□ -0.87
SCARB2-206ENST00000638175 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
SCARB2-206ENST00000638175 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
SCARB2-206ENST00000638175 ATP7AQ04656 1500 aa9.59□□□□□ -0.87
SCARB2-206ENST00000638175 CCDC141Q6ZP82 1450 aa9.59□□□□□ -0.87
SCARB2-206ENST00000638175 SLC4A3P48751 1232 aa9.58□□□□□ -0.88
SCARB2-206ENST00000638175 NLRP7Q8WX94 980 aa9.58□□□□□ -0.88
SCARB2-206ENST00000638175 MBD5Q9P267 1494 aa9.58□□□□□ -0.88
SCARB2-206ENST00000638175 PLXNC1O60486 1568 aa9.58□□□□□ -0.88
SCARB2-206ENST00000638175 ZPR1O75312 459 aa9.57□□□□□ -0.88
SCARB2-206ENST00000638175 TRAPPC8Q9Y2L5 1435 aa9.56□□□□□ -0.88
SCARB2-206ENST00000638175 BCORL1Q5H9F3 1711 aa9.56□□□□□ -0.88
SCARB2-206ENST00000638175 SHANK2Q9UPX8 1470 aa9.56□□□□□ -0.88
SCARB2-206ENST00000638175 RAPGEF3O95398 923 aa9.56□□□□□ -0.88
SCARB2-206ENST00000638175 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
SCARB2-206ENST00000638175 Q6ZNB5 142 aa9.56□□□□□ -0.88
SCARB2-206ENST00000638175 ZNF777Q9ULD5 760 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-206ENST00000638175 PCDHB3Q9Y5E6 796 aa9.56□□□□□ -0.88
SCARB2-206ENST00000638175 SIGLEC1Q9BZZ2 1709 aa9.56□□□□□ -0.88
SCARB2-206ENST00000638175 FER1L4A9Z1Z3 1794 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms