RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 C1orf115Q9H7X2 142 aa20.36■□□□□ 0.85
CACNA1A-253ENST00000637927 USP47Q96K76 1375 aa20.36■□□□□ 0.85
CACNA1A-253ENST00000637927 USP5P45974 858 aa20.36■□□□□ 0.85
CACNA1A-253ENST00000637927 DDX54Q8TDD1 881 aaKnown RBP20.36■□□□□ 0.85
CACNA1A-253ENST00000637927 ESCO1Q5FWF5 840 aa20.35■□□□□ 0.85
CACNA1A-253ENST00000637927 RBM10P98175 930 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-253ENST00000637927 SLC4A8Q2Y0W8 1093 aa20.35■□□□□ 0.85
CACNA1A-253ENST00000637927 DZIP1LQ8IYY4 767 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-253ENST00000637927 NUP133Q8WUM0 1156 aa20.35■□□□□ 0.85
CACNA1A-253ENST00000637927 MAGEC2Q9UBF1 373 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-253ENST00000637927 ATP6V1DQ9Y5K8 247 aa20.34■□□□□ 0.85
CACNA1A-253ENST00000637927 CDR1P51861 262 aa20.34■□□□□ 0.85
CACNA1A-253ENST00000637927 HSP90AB4PQ58FF6 505 aa20.33■□□□□ 0.85
CACNA1A-253ENST00000637927 RDXP35241 583 aaKnown RBP20.33■□□□□ 0.85
CACNA1A-253ENST00000637927 RBM25P49756 843 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-253ENST00000637927 CNNM1Q9NRU3 951 aa20.32■□□□□ 0.84
CACNA1A-253ENST00000637927 HSP90B2PQ58FF3 399 aa20.32■□□□□ 0.84
CACNA1A-253ENST00000637927 TMX1Q9H3N1 280 aa20.32■□□□□ 0.84
CACNA1A-253ENST00000637927 PDE3BQ13370 1112 aa20.31■□□□□ 0.84
CACNA1A-253ENST00000637927 PHLDB1Q86UU1 1377 aa20.31■□□□□ 0.84
CACNA1A-253ENST00000637927 TNNT1P13805 278 aa20.31■□□□□ 0.84
CACNA1A-253ENST00000637927 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
CACNA1A-253ENST00000637927 UACAQ9BZF9 1416 aa20.31■□□□□ 0.84
CACNA1A-253ENST00000637927 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
CACNA1A-253ENST00000637927 TTC39AQ5SRH9 613 aa20.3■□□□□ 0.84
CACNA1A-253ENST00000637927 RNF20Q5VTR2 975 aa20.3■□□□□ 0.84
CACNA1A-253ENST00000637927 CCDC73Q6ZRK6 1079 aa20.3■□□□□ 0.84
CACNA1A-253ENST00000637927 SDF4Q9BRK5 362 aa20.3■□□□□ 0.84
CACNA1A-253ENST00000637927 DDX19BQ9UMR2 479 aa20.3■□□□□ 0.84
CACNA1A-253ENST00000637927 C11orf95C9JLR9 678 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-253ENST00000637927 MYL6BP14649 208 aa20.3■□□□□ 0.84
CACNA1A-253ENST00000637927 REC8O95072 547 aa20.29■□□□□ 0.84
CACNA1A-253ENST00000637927 NLRP6P59044 892 aa20.29■□□□□ 0.84
CACNA1A-253ENST00000637927 CLASRPQ8N2M8 674 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-253ENST00000637927 DEF6Q9H4E7 631 aa20.28■□□□□ 0.84
CACNA1A-253ENST00000637927 DNA2P51530 1060 aa20.28■□□□□ 0.84
CACNA1A-253ENST00000637927 KIF6Q6ZMV9 814 aa20.28■□□□□ 0.84
CACNA1A-253ENST00000637927 UBTFL1P0CB47 393 aaPredicted RBP20.27■□□□□ 0.84
CACNA1A-253ENST00000637927 FSD1Q9BTV5 496 aa20.27■□□□□ 0.84
CACNA1A-253ENST00000637927 ZRSR2Q15696 482 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-253ENST00000637927 ZNF76P36508 570 aa20.26■□□□□ 0.83
CACNA1A-253ENST00000637927 CCDC181Q5TID7 509 aa20.26■□□□□ 0.83
CACNA1A-253ENST00000637927 ZNF644Q9H582 1327 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-253ENST00000637927 INTS3Q68E01 1043 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-253ENST00000637927 CT47B1P0C2W7 299 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-253ENST00000637927 NF2P35240 595 aa20.26■□□□□ 0.83
CACNA1A-253ENST00000637927 DHX8Q14562 1220 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-253ENST00000637927 DCTN1Q14203 1278 aa20.25■□□□□ 0.83
CACNA1A-253ENST00000637927 NFKBIBQ15653 356 aa20.25■□□□□ 0.83
CACNA1A-253ENST00000637927 ZBTB9Q96C00 473 aa20.25■□□□□ 0.83
CACNA1A-253ENST00000637927 RUNDC1Q96C34 613 aa20.25■□□□□ 0.83
CACNA1A-253ENST00000637927 CCDC113Q9H0I3 377 aa20.25■□□□□ 0.83
CACNA1A-253ENST00000637927 GSE1Q14687 1217 aa20.25■□□□□ 0.83
CACNA1A-253ENST00000637927 GOLGA6L10A0A0M3HER8 536 aa20.24■□□□□ 0.83
CACNA1A-253ENST00000637927 GOLGA6L10A6NI86 522 aa20.24■□□□□ 0.83
CACNA1A-253ENST00000637927 XPCQ01831 940 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-253ENST00000637927 TERF1P54274 439 aa20.24■□□□□ 0.83
CACNA1A-253ENST00000637927 COMMD10Q9Y6G5 202 aa20.24■□□□□ 0.83
CACNA1A-253ENST00000637927 NOM1Q5C9Z4 860 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-253ENST00000637927 SRRTQ9BXP5 876 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-253ENST00000637927 PTPRGP23470 1445 aa20.23■□□□□ 0.83
CACNA1A-253ENST00000637927 ERC2O15083 957 aa20.23■□□□□ 0.83
CACNA1A-253ENST00000637927 BCCIPQ9P287 314 aaKnown RBP eCLIP20.23■□□□□ 0.83
CACNA1A-253ENST00000637927 API5Q9BZZ5 524 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-253ENST00000637927 PRKRIP1Q9H875 184 aaPredicted RBP20.22■□□□□ 0.83
CACNA1A-253ENST00000637927 XBP1P17861 261 aa20.22■□□□□ 0.83
CACNA1A-253ENST00000637927 TRIM5Q9C035 493 aa20.22■□□□□ 0.83
CACNA1A-253ENST00000637927 SKOR2Q2VWA4 1001 aaPredicted RBP20.22■□□□□ 0.83
CACNA1A-253ENST00000637927 LRRFIP2Q9Y608 721 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-253ENST00000637927 OSCARQ8IYS5 282 aa20.2■□□□□ 0.82
CACNA1A-253ENST00000637927 GBP2P32456 591 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-253ENST00000637927 MYO6Q9UM54 1294 aa20.2■□□□□ 0.82
CACNA1A-253ENST00000637927 CBX1P83916 185 aa20.19■□□□□ 0.82
CACNA1A-253ENST00000637927 RUSC2Q8N2Y8 1516 aa20.19■□□□□ 0.82
CACNA1A-253ENST00000637927 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
CACNA1A-253ENST00000637927 SURF6O75683 361 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-253ENST00000637927 ANAPC15P60006 121 aa20.19■□□□□ 0.82
CACNA1A-253ENST00000637927 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
CACNA1A-253ENST00000637927 ARGLU1Q9NWB6 273 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-253ENST00000637927 ERICH4A6NGS2 130 aa20.18■□□□□ 0.82
CACNA1A-253ENST00000637927 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACNA1A-253ENST00000637927 TXNDC2Q86VQ3 553 aa20.18■□□□□ 0.82
CACNA1A-253ENST00000637927 ACBD3Q9H3P7 528 aa20.18■□□□□ 0.82
CACNA1A-253ENST00000637927 SERPINC1P01008 464 aa20.18■□□□□ 0.82
CACNA1A-253ENST00000637927 UBA5Q9GZZ9 404 aa20.18■□□□□ 0.82
CACNA1A-253ENST00000637927 TBC1D2BQ9UPU7 963 aa20.18■□□□□ 0.82
CACNA1A-253ENST00000637927 UBE4AQ14139 1066 aa20.17■□□□□ 0.82
CACNA1A-253ENST00000637927 TICAM2Q86XR7 235 aa20.17■□□□□ 0.82
CACNA1A-253ENST00000637927 C22orf23Q9BZE7 217 aa20.17■□□□□ 0.82
CACNA1A-253ENST00000637927 GOPCQ9HD26 462 aa20.17■□□□□ 0.82
CACNA1A-253ENST00000637927 GNAI1P63096 354 aa20.16■□□□□ 0.82
CACNA1A-253ENST00000637927 CCDC112Q8NEF3 446 aa20.16■□□□□ 0.82
CACNA1A-253ENST00000637927 NINLQ9Y2I6 1382 aa20.16■□□□□ 0.82
CACNA1A-253ENST00000637927 MACROD2A1Z1Q3 448 aa20.15■□□□□ 0.82
CACNA1A-253ENST00000637927 TOM1L2Q6ZVM7 507 aa20.15■□□□□ 0.82
CACNA1A-253ENST00000637927 PROSER2Q86WR7 435 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-253ENST00000637927 ZNF354CQ86Y25 554 aa20.15■□□□□ 0.82
CACNA1A-253ENST00000637927 CTNNBL1Q8WYA6 563 aaPredicted RBP20.15■□□□□ 0.82
CACNA1A-253ENST00000637927 DRC1Q96MC2 740 aa20.15■□□□□ 0.82
CACNA1A-253ENST00000637927 MTHFSP49914 203 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms