RNA–Protein interactions for RNA: ENST00000637909.1

CLCN2-221, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-221ENST00000637909 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
CLCN2-221ENST00000637909 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
CLCN2-221ENST00000637909 SETD1BQ9UPS6 1966 aaKnown RBP13.76□□□□□ -0.21
CLCN2-221ENST00000637909 TERF2IPQ9NYB0 399 aa13.76□□□□□ -0.21
CLCN2-221ENST00000637909 DEKP35659 375 aaKnown RBP13.75□□□□□ -0.21
CLCN2-221ENST00000637909 PAXIP1Q6ZW49 1069 aaPredicted RBP13.75□□□□□ -0.21
CLCN2-221ENST00000637909 PUS7Q96PZ0 661 aaKnown RBP13.75□□□□□ -0.21
CLCN2-221ENST00000637909 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
CLCN2-221ENST00000637909 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
CLCN2-221ENST00000637909 ATAD2Q6PL18 1390 aa13.74□□□□□ -0.21
CLCN2-221ENST00000637909 METP08581 1390 aa13.74□□□□□ -0.21
CLCN2-221ENST00000637909 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
CLCN2-221ENST00000637909 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
CLCN2-221ENST00000637909 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
CLCN2-221ENST00000637909 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
CLCN2-221ENST00000637909 BCL2L13Q9BXK5 485 aa13.73□□□□□ -0.21
CLCN2-221ENST00000637909 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
CLCN2-221ENST00000637909 ZMYND15Q9H091 742 aa13.73□□□□□ -0.21
CLCN2-221ENST00000637909 RSPH6AQ9H0K4 717 aa13.73□□□□□ -0.21
CLCN2-221ENST00000637909 TMEM2Q9UHN6 1383 aa13.72□□□□□ -0.21
CLCN2-221ENST00000637909 THEMISQ8N1K5 641 aaPredicted RBP13.71□□□□□ -0.21
CLCN2-221ENST00000637909 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.71□□□□□ -0.21
CLCN2-221ENST00000637909 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.21
CLCN2-221ENST00000637909 USP32Q8NFA0 1604 aa13.71□□□□□ -0.21
CLCN2-221ENST00000637909 NUTM2FA1L443 756 aa13.71□□□□□ -0.21
CLCN2-221ENST00000637909 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.21
CLCN2-221ENST00000637909 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLCN2-221ENST00000637909 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.21
CLCN2-221ENST00000637909 NSD2O96028 1365 aa13.71□□□□□ -0.22
CLCN2-221ENST00000637909 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
CLCN2-221ENST00000637909 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
CLCN2-221ENST00000637909 PANK1Q8TE04 598 aa13.7□□□□□ -0.22
CLCN2-221ENST00000637909 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
CLCN2-221ENST00000637909 TSR2Q969E8 191 aaKnown RBP13.68□□□□□ -0.22
CLCN2-221ENST00000637909 NINLQ9Y2I6 1382 aa13.68□□□□□ -0.22
CLCN2-221ENST00000637909 LTKP29376 864 aa13.68□□□□□ -0.22
CLCN2-221ENST00000637909 COG6Q9Y2V7 657 aa13.68□□□□□ -0.22
CLCN2-221ENST00000637909 EID1Q9Y6B2 187 aa13.68□□□□□ -0.22
CLCN2-221ENST00000637909 IQSEC2Q5JU85 1478 aa13.68□□□□□ -0.22
CLCN2-221ENST00000637909 NME9Q86XW9 330 aa13.67□□□□□ -0.22
CLCN2-221ENST00000637909 WASLO00401 505 aaPredicted RBP13.67□□□□□ -0.22
CLCN2-221ENST00000637909 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
CLCN2-221ENST00000637909 PDE4AP27815 886 aa13.67□□□□□ -0.22
CLCN2-221ENST00000637909 NGEFQ8N5V2 710 aa13.66□□□□□ -0.22
CLCN2-221ENST00000637909 SLC26A8Q96RN1 970 aa13.66□□□□□ -0.22
CLCN2-221ENST00000637909 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
CLCN2-221ENST00000637909 CLUAP1Q96AJ1 413 aa13.66□□□□□ -0.22
CLCN2-221ENST00000637909 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
CLCN2-221ENST00000637909 DIAPH1O60610 1272 aaKnown RBP13.65□□□□□ -0.22
CLCN2-221ENST00000637909 SLIT1O75093 1534 aa13.65□□□□□ -0.22
CLCN2-221ENST00000637909 NRXN3Q9Y4C0 1643 aa13.65□□□□□ -0.22
CLCN2-221ENST00000637909 KDM2BQ8NHM5 1336 aa13.65□□□□□ -0.22
CLCN2-221ENST00000637909 PAK3O75914 559 aaPredicted RBP13.65□□□□□ -0.22
CLCN2-221ENST00000637909 RARSP54136 660 aaKnown RBP13.65□□□□□ -0.22
CLCN2-221ENST00000637909 NUDT16Q96DE0 195 aaKnown RBP13.65□□□□□ -0.22
CLCN2-221ENST00000637909 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
CLCN2-221ENST00000637909 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
CLCN2-221ENST00000637909 SETD1AO15047 1707 aaKnown RBP13.64□□□□□ -0.23
CLCN2-221ENST00000637909 ARHGAP23Q9P227 1491 aa13.64□□□□□ -0.23
CLCN2-221ENST00000637909 TMPOP42166 694 aaKnown RBP13.64□□□□□ -0.23
CLCN2-221ENST00000637909 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
CLCN2-221ENST00000637909 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
CLCN2-221ENST00000637909 EMILIN1Q9Y6C2 1016 aa13.64□□□□□ -0.23
CLCN2-221ENST00000637909 HMOX1P09601 288 aa13.64□□□□□ -0.23
CLCN2-221ENST00000637909 RGS3P49796 1198 aa13.64□□□□□ -0.23
CLCN2-221ENST00000637909 WDR63Q8IWG1 891 aa13.64□□□□□ -0.23
CLCN2-221ENST00000637909 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
CLCN2-221ENST00000637909 POLKQ9UBT6 870 aa13.63□□□□□ -0.23
CLCN2-221ENST00000637909 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
CLCN2-221ENST00000637909 RLBP1P12271 317 aa13.63□□□□□ -0.23
CLCN2-221ENST00000637909 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
CLCN2-221ENST00000637909 RIPK4P57078 832 aa13.62□□□□□ -0.23
CLCN2-221ENST00000637909 RRS1Q15050 365 aaKnown RBP13.62□□□□□ -0.23
CLCN2-221ENST00000637909 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
CLCN2-221ENST00000637909 CENPQQ7L2Z9 268 aaPredicted RBP13.62□□□□□ -0.23
CLCN2-221ENST00000637909 PLEKHG1Q9ULL1 1385 aa13.62□□□□□ -0.23
CLCN2-221ENST00000637909 ROBO2Q9HCK4 1378 aa13.61□□□□□ -0.23
CLCN2-221ENST00000637909 IGHDP01880 384 aa13.61□□□□□ -0.23
CLCN2-221ENST00000637909 ANKLE2Q86XL3 938 aa13.61□□□□□ -0.23
CLCN2-221ENST00000637909 BACH2Q9BYV9 841 aa13.61□□□□□ -0.23
CLCN2-221ENST00000637909 CCDC27Q2M243 656 aa13.61□□□□□ -0.23
CLCN2-221ENST00000637909 DLC1Q96QB1 1528 aa13.61□□□□□ -0.23
CLCN2-221ENST00000637909 PRR36Q9H6K5 1346 aa13.61□□□□□ -0.23
CLCN2-221ENST00000637909 PRKAR2BP31323 418 aa13.6□□□□□ -0.23
CLCN2-221ENST00000637909 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
CLCN2-221ENST00000637909 SOX12O15370 315 aa13.6□□□□□ -0.23
CLCN2-221ENST00000637909 MYH16Q9H6N6 1097 aa13.6□□□□□ -0.23
CLCN2-221ENST00000637909 LAS1LQ9Y4W2 734 aaKnown RBP13.6□□□□□ -0.23
CLCN2-221ENST00000637909 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
CLCN2-221ENST00000637909 THUMPD2Q9BTF0 503 aaKnown RBP13.6□□□□□ -0.23
CLCN2-221ENST00000637909 NOP58Q9Y2X3 529 aaKnown RBP13.59□□□□□ -0.23
CLCN2-221ENST00000637909 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
CLCN2-221ENST00000637909 PHACTR3Q96KR7 559 aa13.58□□□□□ -0.24
CLCN2-221ENST00000637909 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
CLCN2-221ENST00000637909 ADAMTS13Q76LX8 1427 aa13.58□□□□□ -0.24
CLCN2-221ENST00000637909 MS4A1P11836 297 aa13.58□□□□□ -0.24
CLCN2-221ENST00000637909 GLIPR1L2Q4G1C9 344 aa13.58□□□□□ -0.24
CLCN2-221ENST00000637909 ATP7BP35670 1465 aa13.58□□□□□ -0.24
CLCN2-221ENST00000637909 HSPA2P54652 639 aa13.57□□□□□ -0.24
CLCN2-221ENST00000637909 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms