RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 PTPRMP28827 1452 aa9.86□□□□□ -0.83
CDKL5-211ENST00000637881 ADAMTSL3P82987 1691 aa9.86□□□□□ -0.83
CDKL5-211ENST00000637881 CLGNO14967 610 aa9.86□□□□□ -0.83
CDKL5-211ENST00000637881 RBM25P49756 843 aaKnown RBP9.86□□□□□ -0.83
CDKL5-211ENST00000637881 AXDND1Q5T1B0 1012 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-211ENST00000637881 VWDEQ8N2E2 1590 aa9.85□□□□□ -0.83
CDKL5-211ENST00000637881 GTF2F1P35269 517 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDKL5-211ENST00000637881 NBPF1Q3BBV0 1214 aa9.85□□□□□ -0.83
CDKL5-211ENST00000637881 NUTM2DQ5VT03 806 aaPredicted RBP9.85□□□□□ -0.83
CDKL5-211ENST00000637881 PLCD3Q8N3E9 789 aa9.85□□□□□ -0.83
CDKL5-211ENST00000637881 ARHGAP31Q2M1Z3 1444 aa9.85□□□□□ -0.83
CDKL5-211ENST00000637881 NCOA3Q9Y6Q9 1424 aa9.85□□□□□ -0.83
CDKL5-211ENST00000637881 CAMSAP1Q5T5Y3 1602 aa9.85□□□□□ -0.83
CDKL5-211ENST00000637881 TNRQ92752 1358 aa9.84□□□□□ -0.83
CDKL5-211ENST00000637881 VGLL3A8MV65 326 aa9.84□□□□□ -0.83
CDKL5-211ENST00000637881 MYRIPQ8NFW9 859 aa9.84□□□□□ -0.83
CDKL5-211ENST00000637881 PRIMPOLQ96LW4 560 aa9.84□□□□□ -0.83
CDKL5-211ENST00000637881 GZF1Q9H116 711 aaPredicted RBP9.84□□□□□ -0.83
CDKL5-211ENST00000637881 UPF2Q9HAU5 1272 aaKnown RBP9.84□□□□□ -0.83
CDKL5-211ENST00000637881 EFCAB6Q5THR3 1501 aa9.84□□□□□ -0.83
CDKL5-211ENST00000637881 LMTK2Q8IWU2 1503 aa9.84□□□□□ -0.83
CDKL5-211ENST00000637881 CCDC66A2RUB6 948 aa9.83□□□□□ -0.84
CDKL5-211ENST00000637881 HMGN5P82970 282 aaKnown RBP9.83□□□□□ -0.84
CDKL5-211ENST00000637881 GABPB1Q06547 395 aaPredicted RBP9.83□□□□□ -0.84
CDKL5-211ENST00000637881 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
CDKL5-211ENST00000637881 ANKRD30BQ9BXX2 1392 aa9.83□□□□□ -0.84
CDKL5-211ENST00000637881 TET3O43151 1660 aa9.83□□□□□ -0.84
CDKL5-211ENST00000637881 BLMP54132 1417 aaPredicted RBP9.83□□□□□ -0.84
CDKL5-211ENST00000637881 NASPP49321 788 aaPredicted RBP9.83□□□□□ -0.84
CDKL5-211ENST00000637881 FAM193AP78312 1265 aa9.83□□□□□ -0.84
CDKL5-211ENST00000637881 TMC1Q8TDI8 760 aa9.83□□□□□ -0.84
CDKL5-211ENST00000637881 SLC52A1Q9NWF4 448 aa9.83□□□□□ -0.84
CDKL5-211ENST00000637881 CIZ1Q9ULV3 898 aaPredicted RBP9.83□□□□□ -0.84
CDKL5-211ENST00000637881 ERVK-7P63135 1459 aa9.82□□□□□ -0.84
CDKL5-211ENST00000637881 C3P01024 1663 aa9.82□□□□□ -0.84
CDKL5-211ENST00000637881 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
CDKL5-211ENST00000637881 TBC1D32Q96NH3 1257 aa9.82□□□□□ -0.84
CDKL5-211ENST00000637881 ZKSCAN5Q9Y2L8 839 aa9.82□□□□□ -0.84
CDKL5-211ENST00000637881 PLA2R1Q13018 1463 aa9.82□□□□□ -0.84
CDKL5-211ENST00000637881 UGGT1Q9NYU2 1555 aa9.82□□□□□ -0.84
CDKL5-211ENST00000637881 ZC3H13Q5T200 1668 aaKnown RBP9.81□□□□□ -0.84
CDKL5-211ENST00000637881 HSP90B1P14625 803 aaKnown RBP9.81□□□□□ -0.84
CDKL5-211ENST00000637881 HSPA2P54652 639 aa9.81□□□□□ -0.84
CDKL5-211ENST00000637881 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.81□□□□□ -0.84
CDKL5-211ENST00000637881 ZNF622Q969S3 477 aaKnown RBP eCLIP9.81□□□□□ -0.84
CDKL5-211ENST00000637881 PDLIM2Q96JY6 352 aa9.81□□□□□ -0.84
CDKL5-211ENST00000637881 TBC1D2Q9BYX2 928 aa9.81□□□□□ -0.84
CDKL5-211ENST00000637881 MYBBP1AQ9BQG0 1328 aaKnown RBP9.81□□□□□ -0.84
CDKL5-211ENST00000637881 IRX5P78411 483 aaPredicted RBP9.8□□□□□ -0.84
CDKL5-211ENST00000637881 RALBP1Q15311 655 aa9.8□□□□□ -0.84
CDKL5-211ENST00000637881 DHX37Q8IY37 1157 aaKnown RBP9.8□□□□□ -0.84
CDKL5-211ENST00000637881 GBP4Q96PP9 640 aa9.8□□□□□ -0.84
CDKL5-211ENST00000637881 GEMIN8Q9NWZ8 242 aaKnown RBP9.8□□□□□ -0.84
CDKL5-211ENST00000637881 RPRD2Q5VT52 1461 aaKnown RBP9.8□□□□□ -0.84
CDKL5-211ENST00000637881 SAMD1Q6SPF0 538 aaPredicted RBP9.8□□□□□ -0.84
CDKL5-211ENST00000637881 CREBRFQ8IUR6 639 aa9.8□□□□□ -0.84
CDKL5-211ENST00000637881 FEZ1Q99689 392 aa9.8□□□□□ -0.84
CDKL5-211ENST00000637881 CGNQ9P2M7 1197 aaKnown RBP9.8□□□□□ -0.84
CDKL5-211ENST00000637881 NOS1P29475 1434 aa9.79□□□□□ -0.84
CDKL5-211ENST00000637881 GAS2L3Q86XJ1 694 aa9.79□□□□□ -0.84
CDKL5-211ENST00000637881 PTPRTO14522 1441 aa9.79□□□□□ -0.84
CDKL5-211ENST00000637881 SKAP1Q86WV1 359 aa9.78□□□□□ -0.84
CDKL5-211ENST00000637881 THEMISQ8N1K5 641 aaPredicted RBP9.78□□□□□ -0.84
CDKL5-211ENST00000637881 CCDC39Q9UFE4 941 aa9.78□□□□□ -0.84
CDKL5-211ENST00000637881 KIF3AQ9Y496 699 aa9.78□□□□□ -0.84
CDKL5-211ENST00000637881 MROH2AA6NES4 1674 aa9.78□□□□□ -0.84
CDKL5-211ENST00000637881 PREX1Q8TCU6 1659 aa9.78□□□□□ -0.84
CDKL5-211ENST00000637881 TULP2O00295 520 aa9.77□□□□□ -0.85
CDKL5-211ENST00000637881 SYNMO15061 1565 aa9.77□□□□□ -0.85
CDKL5-211ENST00000637881 SLC4A2P04920 1241 aa9.77□□□□□ -0.85
CDKL5-211ENST00000637881 CBX1P83916 185 aa9.77□□□□□ -0.85
CDKL5-211ENST00000637881 UHRF1BP1Q6BDS2 1440 aa9.77□□□□□ -0.85
CDKL5-211ENST00000637881 L3MBTL2Q969R5 705 aa9.77□□□□□ -0.85
CDKL5-211ENST00000637881 TIGD1Q96MW7 591 aa9.77□□□□□ -0.85
CDKL5-211ENST00000637881 EFCC1Q9HA90 598 aa9.77□□□□□ -0.85
CDKL5-211ENST00000637881 SPHKAPQ2M3C7 1700 aa9.76□□□□□ -0.85
CDKL5-211ENST00000637881 DDIT3P35638 169 aa9.76□□□□□ -0.85
CDKL5-211ENST00000637881 ZNF445P59923 1031 aa9.76□□□□□ -0.85
CDKL5-211ENST00000637881 TXNDC2Q86VQ3 553 aa9.76□□□□□ -0.85
CDKL5-211ENST00000637881 ZNF692Q9BU19 519 aaPredicted RBP9.76□□□□□ -0.85
CDKL5-211ENST00000637881 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.76□□□□□ -0.85
CDKL5-211ENST00000637881 PSEN1P49768 467 aa9.75□□□□□ -0.85
CDKL5-211ENST00000637881 C1QBPQ07021 282 aaKnown RBP9.75□□□□□ -0.85
CDKL5-211ENST00000637881 ZNF771Q7L3S4 317 aaPredicted RBP9.75□□□□□ -0.85
CDKL5-211ENST00000637881 ZNF710Q8N1W2 664 aa9.75□□□□□ -0.85
CDKL5-211ENST00000637881 CALCOCO1Q9P1Z2 691 aa9.75□□□□□ -0.85
CDKL5-211ENST00000637881 EID1Q9Y6B2 187 aa9.75□□□□□ -0.85
CDKL5-211ENST00000637881 TRPM2O94759 1503 aa9.75□□□□□ -0.85
CDKL5-211ENST00000637881 NCKAP5LQ9HCH0 1330 aa9.75□□□□□ -0.85
CDKL5-211ENST00000637881 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
CDKL5-211ENST00000637881 XPCQ01831 940 aaPredicted RBP9.75□□□□□ -0.85
CDKL5-211ENST00000637881 ATP2B3Q16720 1220 aa9.75□□□□□ -0.85
CDKL5-211ENST00000637881 LTKP29376 864 aa9.74□□□□□ -0.85
CDKL5-211ENST00000637881 CLEC17AQ6ZS10 378 aa9.74□□□□□ -0.85
CDKL5-211ENST00000637881 OGFRQ9NZT2 677 aa9.74□□□□□ -0.85
CDKL5-211ENST00000637881 HDAC5Q9UQL6 1122 aa9.74□□□□□ -0.85
CDKL5-211ENST00000637881 PTMAP06454 111 aaKnown RBP9.73□□□□□ -0.85
CDKL5-211ENST00000637881 KCNJ4P48050 445 aa9.73□□□□□ -0.85
CDKL5-211ENST00000637881 HDGFP51858 240 aaKnown RBP9.73□□□□□ -0.85
CDKL5-211ENST00000637881 KLHL40Q2TBA0 621 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms