RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 ACEP12821 1306 aa8.31□□□□□ -1.08
CACNA1D-227ENST00000637844 TTC21AQ8NDW8 1320 aa8.31□□□□□ -1.08
CACNA1D-227ENST00000637844 PRR36Q9H6K5 1346 aa8.31□□□□□ -1.08
CACNA1D-227ENST00000637844 NCKAP5LQ9HCH0 1330 aa8.31□□□□□ -1.08
CACNA1D-227ENST00000637844 USP6P35125 1406 aa8.31□□□□□ -1.08
CACNA1D-227ENST00000637844 NUTM2FA1L443 756 aa8.31□□□□□ -1.08
CACNA1D-227ENST00000637844 FKBP8Q14318 412 aa8.31□□□□□ -1.08
CACNA1D-227ENST00000637844 ADGRL3Q9HAR2 1447 aa8.3□□□□□ -1.08
CACNA1D-227ENST00000637844 NEFMP07197 916 aa8.3□□□□□ -1.08
CACNA1D-227ENST00000637844 RUNDC1Q96C34 613 aa8.3□□□□□ -1.08
CACNA1D-227ENST00000637844 MAP2P11137 1827 aaKnown RBP8.3□□□□□ -1.08
CACNA1D-227ENST00000637844 AATKQ6ZMQ8 1374 aa8.3□□□□□ -1.08
CACNA1D-227ENST00000637844 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 U2AF1L5P0DN76 240 aaPredicted RBP8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 U2AF1Q01081 240 aaKnown RBP eCLIP8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 ERICH6BQ5W0A0 696 aa8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 NME9Q86XW9 330 aa8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 CCDC146Q8IYE0 955 aa8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 CDK12Q9NYV4 1490 aaPredicted RBP8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 MAPK8IP3Q9UPT6 1336 aa8.29□□□□□ -1.08
CACNA1D-227ENST00000637844 KIF1AQ12756 1690 aa8.28□□□□□ -1.08
CACNA1D-227ENST00000637844 COL3A1P02461 1466 aaPredicted RBP8.28□□□□□ -1.08
CACNA1D-227ENST00000637844 SENP3-EIF4A1A0A087X0R7 540 aa8.28□□□□□ -1.08
CACNA1D-227ENST00000637844 GOLGA2Q08379 1002 aa8.28□□□□□ -1.08
CACNA1D-227ENST00000637844 PROSER2Q86WR7 435 aaPredicted RBP8.28□□□□□ -1.08
CACNA1D-227ENST00000637844 PMFBP1Q8TBY8 1022 aa8.28□□□□□ -1.08
CACNA1D-227ENST00000637844 USP54Q70EL1 1684 aa8.27□□□□□ -1.08
CACNA1D-227ENST00000637844 APAF1O14727 1248 aa8.27□□□□□ -1.09
CACNA1D-227ENST00000637844 PPM1GO15355 546 aaPredicted RBP8.27□□□□□ -1.09
CACNA1D-227ENST00000637844 NCBP3Q53F19 620 aaKnown RBP8.27□□□□□ -1.09
CACNA1D-227ENST00000637844 OVOS2A0A0J9YW53 1432 aa8.27□□□□□ -1.09
CACNA1D-227ENST00000637844 OVOS2Q6IE36 1432 aa8.27□□□□□ -1.09
CACNA1D-227ENST00000637844 PNPLA6Q8IY17 1366 aa8.26□□□□□ -1.09
CACNA1D-227ENST00000637844 LRRC7Q96NW7 1537 aa8.26□□□□□ -1.09
CACNA1D-227ENST00000637844 POLKQ9UBT6 870 aa8.26□□□□□ -1.09
CACNA1D-227ENST00000637844 PHF8Q9UPP1 1060 aa8.26□□□□□ -1.09
CACNA1D-227ENST00000637844 PIK3C2AO00443 1686 aa8.26□□□□□ -1.09
CACNA1D-227ENST00000637844 NCOA3Q9Y6Q9 1424 aa8.26□□□□□ -1.09
CACNA1D-227ENST00000637844 IQSEC2Q5JU85 1478 aa8.26□□□□□ -1.09
CACNA1D-227ENST00000637844 E9PSI1 815 aa8.25□□□□□ -1.09
CACNA1D-227ENST00000637844 RCAN3Q9UKA8 241 aa8.25□□□□□ -1.09
CACNA1D-227ENST00000637844 SSH2Q76I76 1423 aa8.25□□□□□ -1.09
CACNA1D-227ENST00000637844 USP31Q70CQ4 1352 aa8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 PAK3O75914 559 aaPredicted RBP8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 ATF3P18847 181 aa8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 PSME1Q06323 249 aa8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 CCDC27Q2M243 656 aa8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 ESCO1Q5FWF5 840 aa8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 TCP11L2Q8N4U5 519 aa8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 C19orf44Q9H6X5 657 aa8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 LMTK3Q96Q04 1460 aa8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 ZNF521Q96K83 1311 aa8.24□□□□□ -1.09
CACNA1D-227ENST00000637844 DCCP43146 1447 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 KDM4FA0A1W2PPD8 638 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 FCHSD2O94868 740 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 NLRP6P59044 892 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 SLFN5Q08AF3 891 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 NEUROD2Q15784 382 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 WDR63Q8IWG1 891 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 CDCA7LQ96GN5 454 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 EMILIN1Q9Y6C2 1016 aa8.23□□□□□ -1.09
CACNA1D-227ENST00000637844 KIF24Q5T7B8 1368 aa8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 STRCQ7RTU9 1775 aa8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 HSPA2P54652 639 aa8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 RRS1Q15050 365 aaKnown RBP8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 WWC1Q8IX03 1113 aa8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 ABTB2Q8N961 1025 aa8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 RBM33Q96EV2 1170 aaKnown RBP8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 MYH16Q9H6N6 1097 aa8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 STRCP1A6NGW2 1772 aa8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 SBNO1A3KN83 1393 aa8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 MSH6P52701 1360 aa8.22□□□□□ -1.09
CACNA1D-227ENST00000637844 AMPHP49418 695 aa8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 RRP1P56182 461 aaKnown RBP8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 IRX6P78412 446 aaPredicted RBP8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 CALD1Q05682 793 aaKnown RBP8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 CADPS2Q86UW7 1296 aa8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 PPP4R2Q9NY27 417 aa8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 DMRT2Q9Y5R5 561 aa8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 RNF123Q5XPI4 1314 aa8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 FLT4P35916 1363 aa8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 TMEM94Q12767 1356 aa8.21□□□□□ -1.1
CACNA1D-227ENST00000637844 PEAK1Q9H792 1746 aa8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 MARF1Q9Y4F3 1742 aaKnown RBP8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 LTN1O94822 1766 aa8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 SOX12O15370 315 aa8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 PRKAR2BP31323 418 aa8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 IL13P35225 146 aa8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 LMOD3Q0VAK6 560 aa8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 DUSP27Q5VZP5 1158 aa8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 KCNH5Q8NCM2 988 aa8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 PLEKHF1Q96S99 279 aa8.2□□□□□ -1.1
CACNA1D-227ENST00000637844 C1orf167Q5SNV9 1468 aa8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 FBLN1P23142 703 aa8.19□□□□□ -1.1
CACNA1D-227ENST00000637844 TMPOP42166 694 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms