RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 AKAP12Q02952 1782 aa24.02■■□□□ 1.44
CTSD-212ENST00000637815 EDC4Q6P2E9 1401 aaKnown RBP24■■□□□ 1.43
CTSD-212ENST00000637815 PPIP5K1Q6PFW1 1433 aa24■■□□□ 1.43
CTSD-212ENST00000637815 PDE4AP27815 886 aa24■■□□□ 1.43
CTSD-212ENST00000637815 ITSN1Q15811 1721 aa23.99■■□□□ 1.43
CTSD-212ENST00000637815 RARSP54136 660 aaKnown RBP23.99■■□□□ 1.43
CTSD-212ENST00000637815 BACH2Q9BYV9 841 aa23.99■■□□□ 1.43
CTSD-212ENST00000637815 U2SURPO15042 1029 aaKnown RBP23.98■■□□□ 1.43
CTSD-212ENST00000637815 MYH16Q9H6N6 1097 aa23.98■■□□□ 1.43
CTSD-212ENST00000637815 ANP32AP39687 249 aaKnown RBP23.98■■□□□ 1.43
CTSD-212ENST00000637815 DIAPH1O60610 1272 aaKnown RBP23.97■■□□□ 1.43
CTSD-212ENST00000637815 ADAMTS13Q76LX8 1427 aa23.97■■□□□ 1.43
CTSD-212ENST00000637815 TXNDC2Q86VQ3 553 aa23.96■■□□□ 1.43
CTSD-212ENST00000637815 TMPOP42166 694 aaKnown RBP23.96■■□□□ 1.43
CTSD-212ENST00000637815 C3P01024 1663 aa23.95■■□□□ 1.42
CTSD-212ENST00000637815 ERICH6Q7L0X2 663 aa23.94■■□□□ 1.42
CTSD-212ENST00000637815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.94■■□□□ 1.42
CTSD-212ENST00000637815 MAPK8IP3Q9UPT6 1336 aa23.94■■□□□ 1.42
CTSD-212ENST00000637815 LRRC7Q96NW7 1537 aa23.94■■□□□ 1.42
CTSD-212ENST00000637815 PNNQ9H307 717 aaKnown RBP23.93■■□□□ 1.42
CTSD-212ENST00000637815 PLEKHG1Q9ULL1 1385 aa23.93■■□□□ 1.42
CTSD-212ENST00000637815 CT47B1P0C2W7 299 aaPredicted RBP23.92■■□□□ 1.42
CTSD-212ENST00000637815 NUDT16Q96DE0 195 aaKnown RBP23.92■■□□□ 1.42
CTSD-212ENST00000637815 IPO9Q96P70 1041 aaKnown RBP23.92■■□□□ 1.42
CTSD-212ENST00000637815 POLKQ9UBT6 870 aa23.92■■□□□ 1.42
CTSD-212ENST00000637815 TRIM35Q9UPQ4 493 aa23.92■■□□□ 1.42
CTSD-212ENST00000637815 TOPAZ1Q8N9V7 1692 aa23.92■■□□□ 1.42
CTSD-212ENST00000637815 CANXP27824 592 aaKnown RBP23.91■■□□□ 1.42
CTSD-212ENST00000637815 SKAP1Q86WV1 359 aa23.91■■□□□ 1.42
CTSD-212ENST00000637815 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.91■■□□□ 1.42
CTSD-212ENST00000637815 IL16Q14005 1332 aa23.91■■□□□ 1.42
CTSD-212ENST00000637815 CCDC61Q9Y6R9 512 aa23.91■■□□□ 1.42
CTSD-212ENST00000637815 NOP58Q9Y2X3 529 aaKnown RBP23.9■■□□□ 1.42
CTSD-212ENST00000637815 ROBO2Q9HCK4 1378 aa23.9■■□□□ 1.42
CTSD-212ENST00000637815 CDK12Q9NYV4 1490 aaPredicted RBP23.89■■□□□ 1.42
CTSD-212ENST00000637815 AATKQ6ZMQ8 1374 aa23.89■■□□□ 1.42
CTSD-212ENST00000637815 FCHSD2O94868 740 aa23.89■■□□□ 1.41
CTSD-212ENST00000637815 AAMPQ13685 434 aa23.89■■□□□ 1.41
CTSD-212ENST00000637815 PANK1Q8TE04 598 aa23.89■■□□□ 1.41
CTSD-212ENST00000637815 FER1L4A9Z1Z3 1794 aa23.88■■□□□ 1.41
CTSD-212ENST00000637815 CLUAP1Q96AJ1 413 aa23.88■■□□□ 1.41
CTSD-212ENST00000637815 NRKQ7Z2Y5 1582 aa23.87■■□□□ 1.41
CTSD-212ENST00000637815 SLIT1O75093 1534 aa23.87■■□□□ 1.41
CTSD-212ENST00000637815 FRAT1Q92837 279 aaPredicted RBP23.87■■□□□ 1.41
CTSD-212ENST00000637815 COG6Q9Y2V7 657 aa23.87■■□□□ 1.41
CTSD-212ENST00000637815 LTKP29376 864 aa23.85■■□□□ 1.41
CTSD-212ENST00000637815 NME9Q86XW9 330 aa23.85■■□□□ 1.41
CTSD-212ENST00000637815 RSPH6AQ9H0K4 717 aa23.85■■□□□ 1.41
CTSD-212ENST00000637815 ARHGAP23Q9P227 1491 aa23.85■■□□□ 1.41
CTSD-212ENST00000637815 PRR36Q9H6K5 1346 aa23.85■■□□□ 1.41
CTSD-212ENST00000637815 RIPK4P57078 832 aa23.84■■□□□ 1.41
CTSD-212ENST00000637815 VIRMAQ69YN4 1812 aaKnown RBP23.83■■□□□ 1.41
CTSD-212ENST00000637815 TSR2Q969E8 191 aaKnown RBP23.83■■□□□ 1.41
CTSD-212ENST00000637815 ZNF692Q9BU19 519 aaPredicted RBP23.83■■□□□ 1.41
CTSD-212ENST00000637815 FBLN1P23142 703 aa23.83■■□□□ 1.4
CTSD-212ENST00000637815 NCKAP5LQ9HCH0 1330 aa23.82■■□□□ 1.4
CTSD-212ENST00000637815 RLBP1P12271 317 aa23.82■■□□□ 1.4
CTSD-212ENST00000637815 IGHDP01880 384 aa23.81■■□□□ 1.4
CTSD-212ENST00000637815 BCL2L13Q9BXK5 485 aa23.81■■□□□ 1.4
CTSD-212ENST00000637815 PPM1GO15355 546 aaPredicted RBP23.81■■□□□ 1.4
CTSD-212ENST00000637815 PAK3O75914 559 aaPredicted RBP23.81■■□□□ 1.4
CTSD-212ENST00000637815 EMILIN1Q9Y6C2 1016 aa23.81■■□□□ 1.4
CTSD-212ENST00000637815 PTPRUQ92729 1446 aa23.8■■□□□ 1.4
CTSD-212ENST00000637815 EXOSC9Q06265 439 aaKnown RBP23.8■■□□□ 1.4
CTSD-212ENST00000637815 COG3Q96JB2 828 aa23.8■■□□□ 1.4
CTSD-212ENST00000637815 PRKAR2BP31323 418 aa23.79■■□□□ 1.4
CTSD-212ENST00000637815 CEBPAP49715 358 aaPredicted RBP23.79■■□□□ 1.4
CTSD-212ENST00000637815 DLG5Q8TDM6 1919 aa23.79■■□□□ 1.4
CTSD-212ENST00000637815 IL13P35225 146 aa23.79■■□□□ 1.4
CTSD-212ENST00000637815 ZRANB1Q9UGI0 708 aa23.79■■□□□ 1.4
CTSD-212ENST00000637815 TNNQ9UQP3 1299 aa23.78■■□□□ 1.4
CTSD-212ENST00000637815 NALCNQ8IZF0 1738 aa23.78■■□□□ 1.4
CTSD-212ENST00000637815 DIP2AQ14689 1571 aa23.78■■□□□ 1.4
CTSD-212ENST00000637815 ZKSCAN2Q63HK3 967 aa23.77■■□□□ 1.4
CTSD-212ENST00000637815 ZBTB47Q9UFB7 747 aaPredicted RBP23.77■■□□□ 1.4
CTSD-212ENST00000637815 EID1Q9Y6B2 187 aa23.77■■□□□ 1.4
CTSD-212ENST00000637815 NEFMP07197 916 aa23.76■■□□□ 1.39
CTSD-212ENST00000637815 FAM161AQ3B820 660 aa23.76■■□□□ 1.39
CTSD-212ENST00000637815 NPM2Q86SE8 214 aaKnown RBP23.76■■□□□ 1.39
CTSD-212ENST00000637815 PTCH1Q13635 1447 aa23.75■■□□□ 1.39
CTSD-212ENST00000637815 PMFBP1Q8TBY8 1022 aa23.75■■□□□ 1.39
CTSD-212ENST00000637815 PLEKHG3A1L390 1219 aa23.74■■□□□ 1.39
CTSD-212ENST00000637815 NFE2L2Q16236 605 aa23.74■■□□□ 1.39
CTSD-212ENST00000637815 C8orf34Q49A92 452 aa23.74■■□□□ 1.39
CTSD-212ENST00000637815 MVPQ14764 893 aaKnown RBP23.74■■□□□ 1.39
CTSD-212ENST00000637815 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
CTSD-212ENST00000637815 OVOS2A0A0J9YW53 1432 aa23.73■■□□□ 1.39
CTSD-212ENST00000637815 OVOS2Q6IE36 1432 aa23.73■■□□□ 1.39
CTSD-212ENST00000637815 SSH1Q8WYL5 1049 aa23.72■■□□□ 1.39
CTSD-212ENST00000637815 USP6P35125 1406 aa23.72■■□□□ 1.39
CTSD-212ENST00000637815 RIMS1Q86UR5 1692 aaKnown RBP23.72■■□□□ 1.39
CTSD-212ENST00000637815 HMOX1P09601 288 aa23.72■■□□□ 1.39
CTSD-212ENST00000637815 RGS3P49796 1198 aa23.72■■□□□ 1.39
CTSD-212ENST00000637815 DZIP1LQ8IYY4 767 aaKnown RBP23.72■■□□□ 1.39
CTSD-212ENST00000637815 PHACTR3Q96KR7 559 aa23.72■■□□□ 1.39
CTSD-212ENST00000637815 TBX22Q9Y458 520 aa23.72■■□□□ 1.39
CTSD-212ENST00000637815 PCDHB15Q9Y5E8 787 aa23.72■■□□□ 1.39
CTSD-212ENST00000637815 XRN1Q8IZH2 1706 aaKnown RBP23.72■■□□□ 1.39
CTSD-212ENST00000637815 TTC21BQ7Z4L5 1316 aa23.71■■□□□ 1.39
CTSD-212ENST00000637815 SLC26A8Q96RN1 970 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms