RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
SCN8A-214ENST00000637709 HMOX1P09601 288 aa20.04■□□□□ 0.8
SCN8A-214ENST00000637709 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
SCN8A-214ENST00000637709 AMOTL2Q9Y2J4 779 aa20.03■□□□□ 0.8
SCN8A-214ENST00000637709 CCDC61Q9Y6R9 512 aa20.03■□□□□ 0.8
SCN8A-214ENST00000637709 TSR2Q969E8 191 aaKnown RBP20.03■□□□□ 0.8
SCN8A-214ENST00000637709 CPS1P31327 1500 aa20.03■□□□□ 0.8
SCN8A-214ENST00000637709 PMFBP1Q8TBY8 1022 aa20.02■□□□□ 0.8
SCN8A-214ENST00000637709 FRAT1Q92837 279 aaPredicted RBP20.02■□□□□ 0.8
SCN8A-214ENST00000637709 DIAPH1O60610 1272 aaKnown RBP20.02■□□□□ 0.8
SCN8A-214ENST00000637709 COL3A1P02461 1466 aaPredicted RBP20.02■□□□□ 0.79
SCN8A-214ENST00000637709 PLEKHG1Q9ULL1 1385 aa20.01■□□□□ 0.79
SCN8A-214ENST00000637709 TNNQ9UQP3 1299 aa20■□□□□ 0.79
SCN8A-214ENST00000637709 ATP7BP35670 1465 aa20■□□□□ 0.79
SCN8A-214ENST00000637709 PLEKHF1Q96S99 279 aa20■□□□□ 0.79
SCN8A-214ENST00000637709 KNDC1Q76NI1 1749 aa19.99■□□□□ 0.79
SCN8A-214ENST00000637709 CPSF1Q10570 1443 aaKnown RBP19.99■□□□□ 0.79
SCN8A-214ENST00000637709 PANK1Q8TE04 598 aa19.98■□□□□ 0.79
SCN8A-214ENST00000637709 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
SCN8A-214ENST00000637709 TECPR2O15040 1411 aa19.98■□□□□ 0.79
SCN8A-214ENST00000637709 FAM135BQ49AJ0 1406 aa19.98■□□□□ 0.79
SCN8A-214ENST00000637709 CANXP27824 592 aaKnown RBP19.97■□□□□ 0.79
SCN8A-214ENST00000637709 ACEP12821 1306 aa19.97■□□□□ 0.79
SCN8A-214ENST00000637709 TMPOP42166 694 aaKnown RBP19.97■□□□□ 0.79
SCN8A-214ENST00000637709 RGPD8O14715 1765 aaPredicted RBP19.96■□□□□ 0.79
SCN8A-214ENST00000637709 RIMS1Q86UR5 1692 aaKnown RBP19.96■□□□□ 0.79
SCN8A-214ENST00000637709 PRKAR2BP31323 418 aa19.96■□□□□ 0.79
SCN8A-214ENST00000637709 RIPK4P57078 832 aa19.95■□□□□ 0.78
SCN8A-214ENST00000637709 THEMISQ8N1K5 641 aaPredicted RBP19.95■□□□□ 0.78
SCN8A-214ENST00000637709 COG3Q96JB2 828 aa19.95■□□□□ 0.78
SCN8A-214ENST00000637709 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
SCN8A-214ENST00000637709 TRIM35Q9UPQ4 493 aa19.95■□□□□ 0.78
SCN8A-214ENST00000637709 EDC4Q6P2E9 1401 aaKnown RBP19.95■□□□□ 0.78
SCN8A-214ENST00000637709 PHACTR3Q96KR7 559 aa19.95■□□□□ 0.78
SCN8A-214ENST00000637709 THUMPD2Q9BTF0 503 aaKnown RBP19.95■□□□□ 0.78
SCN8A-214ENST00000637709 CDC42BPGQ6DT37 1551 aa19.95■□□□□ 0.78
SCN8A-214ENST00000637709 ITSN1Q15811 1721 aa19.94■□□□□ 0.78
SCN8A-214ENST00000637709 CLUAP1Q96AJ1 413 aa19.94■□□□□ 0.78
SCN8A-214ENST00000637709 MED14O60244 1454 aa19.94■□□□□ 0.78
SCN8A-214ENST00000637709 KCNA6P17658 529 aa19.94■□□□□ 0.78
SCN8A-214ENST00000637709 COG6Q9Y2V7 657 aa19.94■□□□□ 0.78
SCN8A-214ENST00000637709 LAS1LQ9Y4W2 734 aaKnown RBP19.93■□□□□ 0.78
SCN8A-214ENST00000637709 MSH5O43196 834 aa19.93■□□□□ 0.78
SCN8A-214ENST00000637709 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
SCN8A-214ENST00000637709 MON2Q7Z3U7 1717 aa19.92■□□□□ 0.78
SCN8A-214ENST00000637709 NUTM2GQ5VZR2 741 aa19.92■□□□□ 0.78
SCN8A-214ENST00000637709 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
SCN8A-214ENST00000637709 ADGRB2O60241 1585 aa19.91■□□□□ 0.78
SCN8A-214ENST00000637709 AKAP12Q02952 1782 aa19.91■□□□□ 0.78
SCN8A-214ENST00000637709 RARSP54136 660 aaKnown RBP19.91■□□□□ 0.78
SCN8A-214ENST00000637709 WDR63Q8IWG1 891 aa19.91■□□□□ 0.78
SCN8A-214ENST00000637709 PNPLA6Q8IY17 1366 aa19.91■□□□□ 0.78
SCN8A-214ENST00000637709 FANCIQ9NVI1 1328 aa19.9■□□□□ 0.78
SCN8A-214ENST00000637709 EXOSC9Q06265 439 aaKnown RBP19.9■□□□□ 0.78
SCN8A-214ENST00000637709 SIRT1Q96EB6 747 aa19.9■□□□□ 0.78
SCN8A-214ENST00000637709 RSPH6AQ9H0K4 717 aa19.9■□□□□ 0.78
SCN8A-214ENST00000637709 SLIT1O75093 1534 aa19.89■□□□□ 0.78
SCN8A-214ENST00000637709 PLEKHG5O94827 1062 aa19.89■□□□□ 0.77
SCN8A-214ENST00000637709 ARHGAP23Q9P227 1491 aa19.89■□□□□ 0.77
SCN8A-214ENST00000637709 RLBP1P12271 317 aa19.88■□□□□ 0.77
SCN8A-214ENST00000637709 TTC21BQ7Z4L5 1316 aa19.88■□□□□ 0.77
SCN8A-214ENST00000637709 CCDC27Q2M243 656 aa19.87■□□□□ 0.77
SCN8A-214ENST00000637709 NGEFQ8N5V2 710 aa19.87■□□□□ 0.77
SCN8A-214ENST00000637709 TBX22Q9Y458 520 aa19.87■□□□□ 0.77
SCN8A-214ENST00000637709 IL13P35225 146 aa19.86■□□□□ 0.77
SCN8A-214ENST00000637709 AEBP1Q8IUX7 1158 aa19.86■□□□□ 0.77
SCN8A-214ENST00000637709 NGDNQ8NEJ9 315 aaKnown RBP19.86■□□□□ 0.77
SCN8A-214ENST00000637709 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
SCN8A-214ENST00000637709 MYH16Q9H6N6 1097 aa19.85■□□□□ 0.77
SCN8A-214ENST00000637709 FAM83GA6ND36 823 aa19.85■□□□□ 0.77
SCN8A-214ENST00000637709 DCTN1Q14203 1278 aa19.84■□□□□ 0.77
SCN8A-214ENST00000637709 HSP90AB2PQ58FF8 381 aa19.84■□□□□ 0.77
SCN8A-214ENST00000637709 ZNF692Q9BU19 519 aaPredicted RBP19.84■□□□□ 0.77
SCN8A-214ENST00000637709 NPM2Q86SE8 214 aaKnown RBP19.84■□□□□ 0.77
SCN8A-214ENST00000637709 FCHSD2O94868 740 aa19.83■□□□□ 0.77
SCN8A-214ENST00000637709 TOPAZ1Q8N9V7 1692 aa19.83■□□□□ 0.76
SCN8A-214ENST00000637709 USP6P35125 1406 aa19.82■□□□□ 0.76
SCN8A-214ENST00000637709 ELL2O00472 640 aaPredicted RBP19.82■□□□□ 0.76
SCN8A-214ENST00000637709 TCERG1O14776 1098 aaKnown RBP19.82■□□□□ 0.76
SCN8A-214ENST00000637709 RGS3P49796 1198 aa19.82■□□□□ 0.76
SCN8A-214ENST00000637709 DIP2AQ14689 1571 aa19.82■□□□□ 0.76
SCN8A-214ENST00000637709 KDM2BQ8NHM5 1336 aa19.82■□□□□ 0.76
SCN8A-214ENST00000637709 IGHDP01880 384 aa19.82■□□□□ 0.76
SCN8A-214ENST00000637709 C14orf37Q86TY3 774 aa19.81■□□□□ 0.76
SCN8A-214ENST00000637709 PLEKHG3A1L390 1219 aa19.8■□□□□ 0.76
SCN8A-214ENST00000637709 PAK3O75914 559 aaPredicted RBP19.8■□□□□ 0.76
SCN8A-214ENST00000637709 SMC4Q9NTJ3 1288 aa19.8■□□□□ 0.76
SCN8A-214ENST00000637709 NEFMP07197 916 aa19.8■□□□□ 0.76
SCN8A-214ENST00000637709 EIF4A2Q14240 407 aaKnown RBP19.8■□□□□ 0.76
SCN8A-214ENST00000637709 NRKQ7Z2Y5 1582 aa19.8■□□□□ 0.76
SCN8A-214ENST00000637709 SULT6B1Q6IMI4 303 aa19.79■□□□□ 0.76
SCN8A-214ENST00000637709 SSH1Q8WYL5 1049 aa19.79■□□□□ 0.76
SCN8A-214ENST00000637709 CDK12Q9NYV4 1490 aaPredicted RBP19.78■□□□□ 0.76
SCN8A-214ENST00000637709 DLG5Q8TDM6 1919 aa19.78■□□□□ 0.76
SCN8A-214ENST00000637709 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
SCN8A-214ENST00000637709 NFE2L2Q16236 605 aa19.77■□□□□ 0.75
SCN8A-214ENST00000637709 PEAK1Q9H792 1746 aa19.77■□□□□ 0.75
SCN8A-214ENST00000637709 AATKQ6ZMQ8 1374 aa19.76■□□□□ 0.75
SCN8A-214ENST00000637709 PDE4AP27815 886 aa19.76■□□□□ 0.75
SCN8A-214ENST00000637709 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms