RNA–Protein interactions for RNA: ENST00000637692.1

CACNA1A-245, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-245ENST00000637692 NSD3Q9BZ95 1437 aa20.4■□□□□ 0.86
CACNA1A-245ENST00000637692 NRKQ7Z2Y5 1582 aa20.39■□□□□ 0.85
CACNA1A-245ENST00000637692 NPC1L1Q9UHC9 1359 aa20.39■□□□□ 0.85
CACNA1A-245ENST00000637692 NSD2O96028 1365 aa20.38■□□□□ 0.85
CACNA1A-245ENST00000637692 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
CACNA1A-245ENST00000637692 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-245ENST00000637692 ARHGEF10O15013 1369 aa20.35■□□□□ 0.85
CACNA1A-245ENST00000637692 TRPM3Q9HCF6 1732 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-245ENST00000637692 TNS3Q68CZ2 1445 aa20.35■□□□□ 0.85
CACNA1A-245ENST00000637692 LRRC59Q96AG4 307 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-245ENST00000637692 SPATA31A3Q5VYP0 1347 aa20.33■□□□□ 0.85
CACNA1A-245ENST00000637692 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.85
CACNA1A-245ENST00000637692 USP31Q70CQ4 1352 aa20.33■□□□□ 0.84
CACNA1A-245ENST00000637692 PAK3O75914 559 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-245ENST00000637692 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-245ENST00000637692 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-245ENST00000637692 FYB1O15117 783 aa20.31■□□□□ 0.84
CACNA1A-245ENST00000637692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.31■□□□□ 0.84
CACNA1A-245ENST00000637692 ABTB2Q8N961 1025 aa20.3■□□□□ 0.84
CACNA1A-245ENST00000637692 FBXO41Q8TF61 875 aa20.3■□□□□ 0.84
CACNA1A-245ENST00000637692 COL16A1Q07092 1604 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-245ENST00000637692 PHLPP1O60346 1717 aa20.3■□□□□ 0.84
CACNA1A-245ENST00000637692 ALS2Q96Q42 1657 aa20.29■□□□□ 0.84
CACNA1A-245ENST00000637692 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
CACNA1A-245ENST00000637692 NME9Q86XW9 330 aa20.28■□□□□ 0.84
CACNA1A-245ENST00000637692 USP54Q70EL1 1684 aa20.28■□□□□ 0.84
CACNA1A-245ENST00000637692 OVOS2A0A0J9YW53 1432 aa20.27■□□□□ 0.84
CACNA1A-245ENST00000637692 OVOS2Q6IE36 1432 aa20.27■□□□□ 0.84
CACNA1A-245ENST00000637692 PIK3C2AO00443 1686 aa20.27■□□□□ 0.84
CACNA1A-245ENST00000637692 MED1Q15648 1581 aaPredicted RBP20.27■□□□□ 0.84
CACNA1A-245ENST00000637692 COG3Q96JB2 828 aa20.27■□□□□ 0.84
CACNA1A-245ENST00000637692 KIF20BQ96Q89 1820 aa20.26■□□□□ 0.83
CACNA1A-245ENST00000637692 NLRP6P59044 892 aa20.26■□□□□ 0.83
CACNA1A-245ENST00000637692 USP19O94966 1318 aa20.26■□□□□ 0.83
CACNA1A-245ENST00000637692 LMOD2Q6P5Q4 547 aa20.24■□□□□ 0.83
CACNA1A-245ENST00000637692 GGNBP2Q9H3C7 697 aa20.24■□□□□ 0.83
CACNA1A-245ENST00000637692 PNPLA6Q8IY17 1366 aa20.23■□□□□ 0.83
CACNA1A-245ENST00000637692 JCADQ9P266 1359 aa20.23■□□□□ 0.83
CACNA1A-245ENST00000637692 RALBP1Q15311 655 aa20.23■□□□□ 0.83
CACNA1A-245ENST00000637692 DIEXFQ68CQ4 756 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-245ENST00000637692 ANKRD26Q9UPS8 1709 aa20.23■□□□□ 0.83
CACNA1A-245ENST00000637692 HSPA1LP34931 641 aa20.22■□□□□ 0.83
CACNA1A-245ENST00000637692 CC2D1BQ5T0F9 858 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-245ENST00000637692 MORC1Q86VD1 984 aa20.22■□□□□ 0.83
CACNA1A-245ENST00000637692 KCNH5Q8NCM2 988 aa20.22■□□□□ 0.83
CACNA1A-245ENST00000637692 COL22A1Q8NFW1 1626 aaPredicted RBP20.22■□□□□ 0.83
CACNA1A-245ENST00000637692 SLIT3O75094 1523 aa20.22■□□□□ 0.83
CACNA1A-245ENST00000637692 PARD3Q8TEW0 1356 aa20.21■□□□□ 0.83
CACNA1A-245ENST00000637692 AATKQ6ZMQ8 1374 aa20.2■□□□□ 0.82
CACNA1A-245ENST00000637692 ANP32CO43423 234 aa20.19■□□□□ 0.82
CACNA1A-245ENST00000637692 SHPRHQ149N8 1683 aa20.19■□□□□ 0.82
CACNA1A-245ENST00000637692 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
CACNA1A-245ENST00000637692 PRKRIP1Q9H875 184 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-245ENST00000637692 ZRANB1Q9UGI0 708 aa20.18■□□□□ 0.82
CACNA1A-245ENST00000637692 GCP02774 474 aa20.17■□□□□ 0.82
CACNA1A-245ENST00000637692 SPATA31A6Q5VVP1 1343 aa20.17■□□□□ 0.82
CACNA1A-245ENST00000637692 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-245ENST00000637692 KIF24Q5T7B8 1368 aa20.16■□□□□ 0.82
CACNA1A-245ENST00000637692 NFAT5O94916 1531 aa20.15■□□□□ 0.82
CACNA1A-245ENST00000637692 CRYBG1Q9Y4K1 1723 aa20.15■□□□□ 0.82
CACNA1A-245ENST00000637692 CPDO75976 1380 aa20.14■□□□□ 0.81
CACNA1A-245ENST00000637692 PHRF1Q9P1Y6 1649 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-245ENST00000637692 HAP1P54257 671 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-245ENST00000637692 SMG6Q86US8 1419 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-245ENST00000637692 MYBBP1AQ9BQG0 1328 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-245ENST00000637692 ABCC6O95255 1503 aa20.11■□□□□ 0.81
CACNA1A-245ENST00000637692 ABCA3Q99758 1704 aa20.1■□□□□ 0.81
CACNA1A-245ENST00000637692 RTL1A6NKG5 1358 aa20.1■□□□□ 0.81
CACNA1A-245ENST00000637692 PPP2R1AP30153 589 aa20.1■□□□□ 0.81
CACNA1A-245ENST00000637692 ARHGEF25Q86VW2 580 aa20.1■□□□□ 0.81
CACNA1A-245ENST00000637692 CABLES1Q8TDN4 633 aa20.1■□□□□ 0.81
CACNA1A-245ENST00000637692 CNGB1Q14028 1251 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-245ENST00000637692 TNNT2P45379 298 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-245ENST00000637692 POLKQ9UBT6 870 aa20.08■□□□□ 0.81
CACNA1A-245ENST00000637692 MAP3K19Q56UN5 1328 aa20.07■□□□□ 0.8
CACNA1A-245ENST00000637692 CDK12Q9NYV4 1490 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-245ENST00000637692 SOX12O15370 315 aa20.06■□□□□ 0.8
CACNA1A-245ENST00000637692 INSRP06213 1382 aa20.06■□□□□ 0.8
CACNA1A-245ENST00000637692 FLT4P35916 1363 aa20.06■□□□□ 0.8
CACNA1A-245ENST00000637692 KIAA0232Q92628 1395 aa20.06■□□□□ 0.8
CACNA1A-245ENST00000637692 MTHFSP49914 203 aa20.05■□□□□ 0.8
CACNA1A-245ENST00000637692 PRDM11Q9NQV5 511 aa20.05■□□□□ 0.8
CACNA1A-245ENST00000637692 BLMP54132 1417 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-245ENST00000637692 AMPHP49418 695 aa20.04■□□□□ 0.8
CACNA1A-245ENST00000637692 ZC3H6P61129 1189 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-245ENST00000637692 RRS1Q15050 365 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-245ENST00000637692 IP6K1Q92551 441 aa20.04■□□□□ 0.8
CACNA1A-245ENST00000637692 CFAP53Q96M91 514 aa20.04■□□□□ 0.8
CACNA1A-245ENST00000637692 PLEKHG5O94827 1062 aa20.03■□□□□ 0.8
CACNA1A-245ENST00000637692 EMILIN1Q9Y6C2 1016 aa20.03■□□□□ 0.8
CACNA1A-245ENST00000637692 NUTM2BA6NNL0 878 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-245ENST00000637692 NUTM2EB1AL46 878 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-245ENST00000637692 CCER2I3L3R5 266 aa20.01■□□□□ 0.79
CACNA1A-245ENST00000637692 FBLN1P23142 703 aa20.01■□□□□ 0.79
CACNA1A-245ENST00000637692 HOXC9P31274 260 aa20.01■□□□□ 0.79
CACNA1A-245ENST00000637692 NUTM2AQ8IVF1 878 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-245ENST00000637692 COL14A1Q05707 1796 aaKnown RBP20■□□□□ 0.79
CACNA1A-245ENST00000637692 LRP6O75581 1613 aa19.99■□□□□ 0.79
CACNA1A-245ENST00000637692 LTN1O94822 1766 aa19.99■□□□□ 0.79
CACNA1A-245ENST00000637692 PPM1GO15355 546 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms