RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 BRD4O60885 1362 aaPredicted RBP20.82■□□□□ 0.92
CTSD-211ENST00000637387 CCDC61Q9Y6R9 512 aa20.81■□□□□ 0.92
CTSD-211ENST00000637387 TERF2IPQ9NYB0 399 aa20.8■□□□□ 0.92
CTSD-211ENST00000637387 NHSL1Q5SYE7 1610 aa20.8■□□□□ 0.92
CTSD-211ENST00000637387 NSD2O96028 1365 aa20.8■□□□□ 0.92
CTSD-211ENST00000637387 C1orf167Q5SNV9 1468 aa20.8■□□□□ 0.92
CTSD-211ENST00000637387 MRS2Q9HD23 443 aa20.8■□□□□ 0.92
CTSD-211ENST00000637387 SPATA31A6Q5VVP1 1343 aa20.79■□□□□ 0.92
CTSD-211ENST00000637387 SHPRHQ149N8 1683 aa20.79■□□□□ 0.92
CTSD-211ENST00000637387 YTHDC1Q96MU7 727 aaKnown RBP20.79■□□□□ 0.92
CTSD-211ENST00000637387 EDC4Q6P2E9 1401 aaKnown RBP20.79■□□□□ 0.92
CTSD-211ENST00000637387 CGNL1Q0VF96 1302 aa20.78■□□□□ 0.92
CTSD-211ENST00000637387 NUTM2FA1L443 756 aa20.76■□□□□ 0.91
CTSD-211ENST00000637387 HDGFL2Q7Z4V5 671 aaPredicted RBP20.76■□□□□ 0.91
CTSD-211ENST00000637387 NLRP13Q86W25 1043 aa20.76■□□□□ 0.91
CTSD-211ENST00000637387 LRP6O75581 1613 aa20.76■□□□□ 0.91
CTSD-211ENST00000637387 MARF1Q9Y4F3 1742 aaKnown RBP20.76■□□□□ 0.91
CTSD-211ENST00000637387 PLEKHG3A1L390 1219 aa20.76■□□□□ 0.91
CTSD-211ENST00000637387 POTEAQ6S8J7 498 aa20.76■□□□□ 0.91
CTSD-211ENST00000637387 POLR3AO14802 1390 aaPredicted RBP20.76■□□□□ 0.91
CTSD-211ENST00000637387 PPP2R1AP30153 589 aa20.75■□□□□ 0.91
CTSD-211ENST00000637387 USP54Q70EL1 1684 aa20.75■□□□□ 0.91
CTSD-211ENST00000637387 USP6P35125 1406 aa20.74■□□□□ 0.91
CTSD-211ENST00000637387 SSH2Q76I76 1423 aa20.74■□□□□ 0.91
CTSD-211ENST00000637387 DDX17Q92841 729 aaKnown RBP20.73■□□□□ 0.91
CTSD-211ENST00000637387 PIK3C2AO00443 1686 aa20.73■□□□□ 0.91
CTSD-211ENST00000637387 LRRC59Q96AG4 307 aaKnown RBP20.72■□□□□ 0.91
CTSD-211ENST00000637387 ORAI2Q96SN7 254 aa20.72■□□□□ 0.91
CTSD-211ENST00000637387 KIF1AQ12756 1690 aa20.72■□□□□ 0.91
CTSD-211ENST00000637387 ACEP12821 1306 aa20.72■□□□□ 0.91
CTSD-211ENST00000637387 FYB1O15117 783 aa20.71■□□□□ 0.91
CTSD-211ENST00000637387 MAP2P11137 1827 aaKnown RBP20.7■□□□□ 0.9
CTSD-211ENST00000637387 PNISRQ8TF01 805 aaKnown RBP20.69■□□□□ 0.9
CTSD-211ENST00000637387 SOS2Q07890 1332 aaPredicted RBP20.69■□□□□ 0.9
CTSD-211ENST00000637387 GGNBP2Q9H3C7 697 aa20.68■□□□□ 0.9
CTSD-211ENST00000637387 PNPLA6Q8IY17 1366 aa20.68■□□□□ 0.9
CTSD-211ENST00000637387 TRPM3Q9HCF6 1732 aaPredicted RBP20.68■□□□□ 0.9
CTSD-211ENST00000637387 MORC1Q86VD1 984 aa20.67■□□□□ 0.9
CTSD-211ENST00000637387 ZNF692Q9BU19 519 aaPredicted RBP20.67■□□□□ 0.9
CTSD-211ENST00000637387 OVOS2A0A0J9YW53 1432 aa20.66■□□□□ 0.9
CTSD-211ENST00000637387 OVOS2Q6IE36 1432 aa20.66■□□□□ 0.9
CTSD-211ENST00000637387 PMFBP1Q8TBY8 1022 aa20.66■□□□□ 0.9
CTSD-211ENST00000637387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.65■□□□□ 0.9
CTSD-211ENST00000637387 FAM9BQ8IZU0 186 aa20.64■□□□□ 0.9
CTSD-211ENST00000637387 COL3A1P02461 1466 aaPredicted RBP20.64■□□□□ 0.89
CTSD-211ENST00000637387 TTC21BQ7Z4L5 1316 aa20.64■□□□□ 0.89
CTSD-211ENST00000637387 MEX3CQ5U5Q3 659 aaKnown RBP20.63■□□□□ 0.89
CTSD-211ENST00000637387 NME9Q86XW9 330 aa20.63■□□□□ 0.89
CTSD-211ENST00000637387 NUTM2BA6NNL0 878 aaPredicted RBP20.63■□□□□ 0.89
CTSD-211ENST00000637387 NUTM2EB1AL46 878 aaPredicted RBP20.63■□□□□ 0.89
CTSD-211ENST00000637387 NUTM2AQ8IVF1 878 aaPredicted RBP20.63■□□□□ 0.89
CTSD-211ENST00000637387 ESCO1Q5FWF5 840 aa20.62■□□□□ 0.89
CTSD-211ENST00000637387 ZNF772Q68DY9 489 aaPredicted RBP20.62■□□□□ 0.89
CTSD-211ENST00000637387 ZRANB1Q9UGI0 708 aa20.61■□□□□ 0.89
CTSD-211ENST00000637387 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
CTSD-211ENST00000637387 TNNT2P45379 298 aaPredicted RBP20.6■□□□□ 0.89
CTSD-211ENST00000637387 PHF8Q9UPP1 1060 aa20.6■□□□□ 0.89
CTSD-211ENST00000637387 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
CTSD-211ENST00000637387 NPHP3Q7Z494 1330 aa20.6■□□□□ 0.89
CTSD-211ENST00000637387 ALS2Q96Q42 1657 aa20.59■□□□□ 0.89
CTSD-211ENST00000637387 PXDNQ92626 1479 aa20.59■□□□□ 0.89
CTSD-211ENST00000637387 NGDNQ8NEJ9 315 aaKnown RBP20.59■□□□□ 0.89
CTSD-211ENST00000637387 PEAK1Q9H792 1746 aa20.58■□□□□ 0.89
CTSD-211ENST00000637387 INSRP06213 1382 aa20.58■□□□□ 0.89
CTSD-211ENST00000637387 TTC21AQ8NDW8 1320 aa20.58■□□□□ 0.89
CTSD-211ENST00000637387 USP31Q70CQ4 1352 aa20.57■□□□□ 0.88
CTSD-211ENST00000637387 FOXO3O43524 673 aa20.56■□□□□ 0.88
CTSD-211ENST00000637387 AATKQ6ZMQ8 1374 aa20.56■□□□□ 0.88
CTSD-211ENST00000637387 AFF2P51816 1311 aa20.56■□□□□ 0.88
CTSD-211ENST00000637387 COL22A1Q8NFW1 1626 aaPredicted RBP20.55■□□□□ 0.88
CTSD-211ENST00000637387 MTHFSP49914 203 aa20.55■□□□□ 0.88
CTSD-211ENST00000637387 CDK12Q9NYV4 1490 aaPredicted RBP20.54■□□□□ 0.88
CTSD-211ENST00000637387 HNRNPUQ00839 825 aaKnown RBP eCLIP20.54■□□□□ 0.88
CTSD-211ENST00000637387 LTN1O94822 1766 aa20.53■□□□□ 0.88
CTSD-211ENST00000637387 CENPBP07199 599 aaPredicted RBP20.53■□□□□ 0.88
CTSD-211ENST00000637387 CRYBG1Q9Y4K1 1723 aa20.52■□□□□ 0.88
CTSD-211ENST00000637387 COG3Q96JB2 828 aa20.52■□□□□ 0.88
CTSD-211ENST00000637387 FBLN1P23142 703 aa20.51■□□□□ 0.87
CTSD-211ENST00000637387 C8orf37Q96NL8 207 aa20.51■□□□□ 0.87
CTSD-211ENST00000637387 XPCQ01831 940 aaPredicted RBP20.51■□□□□ 0.87
CTSD-211ENST00000637387 POLKQ9UBT6 870 aa20.5■□□□□ 0.87
CTSD-211ENST00000637387 NFAT5O94916 1531 aa20.49■□□□□ 0.87
CTSD-211ENST00000637387 ADAMTS2O95450 1211 aa20.49■□□□□ 0.87
CTSD-211ENST00000637387 RXRBP28702 533 aa20.49■□□□□ 0.87
CTSD-211ENST00000637387 ADAMTS8Q9UP79 889 aa20.49■□□□□ 0.87
CTSD-211ENST00000637387 SLIT3O75094 1523 aa20.49■□□□□ 0.87
CTSD-211ENST00000637387 PHRF1Q9P1Y6 1649 aaKnown RBP20.48■□□□□ 0.87
CTSD-211ENST00000637387 SPATA31A3Q5VYP0 1347 aa20.48■□□□□ 0.87
CTSD-211ENST00000637387 RGPD1P0DJD0 1748 aa20.48■□□□□ 0.87
CTSD-211ENST00000637387 KRT28Q7Z3Y7 464 aa20.47■□□□□ 0.87
CTSD-211ENST00000637387 NGLY1Q96IV0 654 aa20.47■□□□□ 0.87
CTSD-211ENST00000637387 ZBED9Q6R2W3 1325 aa20.47■□□□□ 0.87
CTSD-211ENST00000637387 FNBP4Q8N3X1 1017 aaPredicted RBP20.46■□□□□ 0.87
CTSD-211ENST00000637387 EMILIN1Q9Y6C2 1016 aa20.46■□□□□ 0.87
CTSD-211ENST00000637387 QTRT2Q9H974 415 aaKnown RBP20.46■□□□□ 0.87
CTSD-211ENST00000637387 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.86
CTSD-211ENST00000637387 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
CTSD-211ENST00000637387 RBM6P78332 1123 aaKnown RBP20.43■□□□□ 0.86
CTSD-211ENST00000637387 RRS1Q15050 365 aaKnown RBP20.43■□□□□ 0.86
CTSD-211ENST00000637387 PSME1Q06323 249 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms