RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 FAM161AQ3B820 660 aa3.51□□□□□ -1.85
GABRB3-223ENST00000637293 NT5DC4Q86YG4 428 aa3.51□□□□□ -1.85
GABRB3-223ENST00000637293 GLYCTKQ8IVS8 523 aa3.51□□□□□ -1.85
GABRB3-223ENST00000637293 PLEKHM2Q8IWE5 1019 aa3.51□□□□□ -1.85
GABRB3-223ENST00000637293 DHX38Q92620 1227 aaKnown RBP3.51□□□□□ -1.85
GABRB3-223ENST00000637293 UPF1Q92900 1129 aaKnown RBP eCLIP3.51□□□□□ -1.85
GABRB3-223ENST00000637293 KIF12Q96FN5 646 aa3.51□□□□□ -1.85
GABRB3-223ENST00000637293 GPATCH3Q96I76 525 aa3.51□□□□□ -1.85
GABRB3-223ENST00000637293 CAPN10Q9HC96 672 aa3.51□□□□□ -1.85
GABRB3-223ENST00000637293 METTL5Q9NRN9 209 aaKnown RBP3.51□□□□□ -1.85
GABRB3-223ENST00000637293 DCTN4Q9UJW0 460 aa3.51□□□□□ -1.85
GABRB3-223ENST00000637293 FAN1Q9Y2M0 1017 aa3.51□□□□□ -1.85
GABRB3-223ENST00000637293 FARP1Q9Y4F1 1045 aaPredicted RBP3.51□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L3A6NCW0 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L4A6NCW7 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 MOXD2PA6NHM9 499 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L15C9J2P7 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L10C9JJH3 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L13C9JLJ4 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L12C9JPN9 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L11C9JVI0 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L21D6R901 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L18D6R9N7 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L22D6RA61 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L17D6RBQ6 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L19D6RCP7 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L20D6RJB6 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 PARNO95453 639 aaKnown RBP3.5□□□□□ -1.85
GABRB3-223ENST00000637293 MAP4K4O95819 1239 aaPredicted RBP3.5□□□□□ -1.85
GABRB3-223ENST00000637293 PRIM1P49642 420 aaKnown RBP3.5□□□□□ -1.85
GABRB3-223ENST00000637293 IRX6P78412 446 aaPredicted RBP3.5□□□□□ -1.85
GABRB3-223ENST00000637293 XPCQ01831 940 aaPredicted RBP3.5□□□□□ -1.85
GABRB3-223ENST00000637293 PSME1Q06323 249 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 RBL2Q08999 1139 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L24Q0WX57 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 NFE2L2Q16236 605 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 C9orf131Q5VYM1 1079 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L2Q6R6M4 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L1Q7RTZ2 530 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 TMEM87AQ8NBN3 555 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 RNF34Q969K3 372 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 GMLQ99445 158 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 TINF2Q9BSI4 451 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 TRIM34Q9BYJ4 488 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 MRS2Q9HD23 443 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 TERF2IPQ9NYB0 399 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 CHPF2Q9P2E5 772 aa3.5□□□□□ -1.85
GABRB3-223ENST00000637293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.49□□□□□ -1.85
GABRB3-223ENST00000637293 ATP5J2-PTCD1G3V325 749 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 H3BRB1 525 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 PPP1R12AO14974 1030 aaPredicted RBP3.49□□□□□ -1.85
GABRB3-223ENST00000637293 CREB3O43889 395 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 ICMTO60725 284 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 PHF14O94880 888 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 ABL1P00519 1130 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 CD46P15529 392 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 TAGLNQ01995 201 aaKnown RBP3.49□□□□□ -1.85
GABRB3-223ENST00000637293 ARID5AQ03989 594 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 RAD51AP2Q09MP3 1159 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 APBB1IPQ7Z5R6 666 aaPredicted RBP3.49□□□□□ -1.85
GABRB3-223ENST00000637293 VPS37DQ86XT2 251 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 RGL4Q8IZJ4 473 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 PMFBP1Q8TBY8 1022 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 NLRP7Q8WX94 980 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 OSBPL2Q9H1P3 480 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 TUT1Q9H6E5 874 aaKnown RBP3.49□□□□□ -1.85
GABRB3-223ENST00000637293 CDHR5Q9HBB8 845 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 GEMIN8Q9NWZ8 242 aaKnown RBP3.49□□□□□ -1.85
GABRB3-223ENST00000637293 IQSEC3Q9UPP2 1182 aaPredicted RBP3.49□□□□□ -1.85
GABRB3-223ENST00000637293 COL4A3BPQ9Y5P4 624 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 ADGRG1Q9Y653 693 aa3.49□□□□□ -1.85
GABRB3-223ENST00000637293 A0A0U1RQG5 324 aaPredicted RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 C2orf72A6NCS6 295 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 USP17L5A8MUK1 530 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 U2SURPO15042 1029 aaKnown RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 C21orf2O43822 256 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 SH3BP5O60239 455 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 GPR37L1O60883 481 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 S100BP04271 92 aaPredicted RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 RASA1P20936 1047 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 DNAJA1P31689 397 aaKnown RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 USP46P62068 366 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 SF3B2Q13435 895 aaKnown RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 TCEAL1Q15170 157 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 LONRF3Q496Y0 759 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 ZNF746Q6NUN9 644 aaPredicted RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 POTEHQ6S545 545 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 METTL16Q86W50 562 aaKnown RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 ANKMY2Q8IV38 441 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 MICALL2Q8IY33 904 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 REM2Q8IYK8 340 aaPredicted RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 NLGN1Q8N2Q7 840 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 GPATCH11Q8N954 259 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 VTI1AQ96AJ9 217 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 MRFAP1L1Q96HT8 127 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 SPOCK3Q9BQ16 436 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 TMEM106CQ9BVX2 250 aa3.48□□□□□ -1.85
GABRB3-223ENST00000637293 HMX1Q9NP08 348 aaPredicted RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 MKRN1Q9UHC7 482 aaKnown RBP3.48□□□□□ -1.85
GABRB3-223ENST00000637293 LAS1LQ9Y4W2 734 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms