RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 SUPT16HQ9Y5B9 1047 aaKnown RBP10.17□□□□□ -0.78
CLN5-217ENST00000637278 GGT6Q6P531 493 aa10.17□□□□□ -0.78
CLN5-217ENST00000637278 RBM27Q9P2N5 1060 aaKnown RBP10.17□□□□□ -0.78
CLN5-217ENST00000637278 RIPOR2Q9Y4F9 1068 aa10.17□□□□□ -0.78
CLN5-217ENST00000637278 SPATA31D1Q6ZQQ2 1576 aa10.17□□□□□ -0.78
CLN5-217ENST00000637278 ABCC3O15438 1527 aa10.17□□□□□ -0.78
CLN5-217ENST00000637278 CPS1P31327 1500 aa10.17□□□□□ -0.78
CLN5-217ENST00000637278 ERBINQ96RT1 1412 aa10.17□□□□□ -0.78
CLN5-217ENST00000637278 TAGLNQ01995 201 aaKnown RBP10.16□□□□□ -0.78
CLN5-217ENST00000637278 HSP90AA2PQ14568 343 aaPredicted RBP10.16□□□□□ -0.78
CLN5-217ENST00000637278 PRDM4Q9UKN5 801 aa10.16□□□□□ -0.78
CLN5-217ENST00000637278 PTPN23Q9H3S7 1636 aa10.16□□□□□ -0.78
CLN5-217ENST00000637278 KLHL42Q9P2K6 505 aa10.16□□□□□ -0.78
CLN5-217ENST00000637278 PRDM15P57071 1507 aaPredicted RBP10.16□□□□□ -0.78
CLN5-217ENST00000637278 NOM1Q5C9Z4 860 aaKnown RBP10.15□□□□□ -0.78
CLN5-217ENST00000637278 MCCP23508 829 aa10.15□□□□□ -0.79
CLN5-217ENST00000637278 MROH1Q8NDA8 1641 aa10.14□□□□□ -0.79
CLN5-217ENST00000637278 KIF3BO15066 747 aa10.14□□□□□ -0.79
CLN5-217ENST00000637278 FBXO31Q5XUX0 539 aaPredicted RBP10.14□□□□□ -0.79
CLN5-217ENST00000637278 GPATCH3Q96I76 525 aa10.14□□□□□ -0.79
CLN5-217ENST00000637278 PPME1Q9Y570 386 aa10.14□□□□□ -0.79
CLN5-217ENST00000637278 KDM5AP29375 1690 aaKnown RBP10.14□□□□□ -0.79
CLN5-217ENST00000637278 WASHC2CQ9Y4E1 1318 aa10.14□□□□□ -0.79
CLN5-217ENST00000637278 MED14O60244 1454 aa10.13□□□□□ -0.79
CLN5-217ENST00000637278 NEURL4Q96JN8 1562 aa10.13□□□□□ -0.79
CLN5-217ENST00000637278 ARHGAP31Q2M1Z3 1444 aa10.13□□□□□ -0.79
CLN5-217ENST00000637278 GPATCH11Q8N954 259 aa10.13□□□□□ -0.79
CLN5-217ENST00000637278 YTHDC1Q96MU7 727 aaKnown RBP10.13□□□□□ -0.79
CLN5-217ENST00000637278 SYNMO15061 1565 aa10.13□□□□□ -0.79
CLN5-217ENST00000637278 UGGT1Q9NYU2 1555 aa10.13□□□□□ -0.79
CLN5-217ENST00000637278 PDE6BP35913 854 aa10.12□□□□□ -0.79
CLN5-217ENST00000637278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLN5-217ENST00000637278 ERVK-7P63135 1459 aa10.12□□□□□ -0.79
CLN5-217ENST00000637278 TXNDC2Q86VQ3 553 aa10.12□□□□□ -0.79
CLN5-217ENST00000637278 CEP152O94986 1710 aa10.12□□□□□ -0.79
CLN5-217ENST00000637278 ZNF330Q9Y3S2 320 aaPredicted RBP10.12□□□□□ -0.79
CLN5-217ENST00000637278 COG6Q9Y2V7 657 aa10.11□□□□□ -0.79
CLN5-217ENST00000637278 LMTK2Q8IWU2 1503 aa10.11□□□□□ -0.79
CLN5-217ENST00000637278 IQGAP1P46940 1657 aa10.11□□□□□ -0.79
CLN5-217ENST00000637278 FECHP22830 423 aa10.11□□□□□ -0.79
CLN5-217ENST00000637278 CDCA8Q53HL2 280 aa10.11□□□□□ -0.79
CLN5-217ENST00000637278 THEMISQ8N1K5 641 aaPredicted RBP10.11□□□□□ -0.79
CLN5-217ENST00000637278 FGD6Q6ZV73 1430 aa10.11□□□□□ -0.79
CLN5-217ENST00000637278 MAP4K4O95819 1239 aaPredicted RBP10.1□□□□□ -0.79
CLN5-217ENST00000637278 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
CLN5-217ENST00000637278 SNRKQ9NRH2 765 aa10.1□□□□□ -0.79
CLN5-217ENST00000637278 KANK1Q14678 1352 aa10.1□□□□□ -0.79
CLN5-217ENST00000637278 DAPK1P53355 1430 aa10.1□□□□□ -0.79
CLN5-217ENST00000637278 MS4A1P11836 297 aa10.1□□□□□ -0.79
CLN5-217ENST00000637278 DNAJC2Q99543 621 aaKnown RBP10.1□□□□□ -0.79
CLN5-217ENST00000637278 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
CLN5-217ENST00000637278 SND1Q7KZF4 910 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLN5-217ENST00000637278 EXOC8Q8IYI6 725 aa10.09□□□□□ -0.79
CLN5-217ENST00000637278 PROCA1Q8NCQ7 364 aaPredicted RBP10.09□□□□□ -0.79
CLN5-217ENST00000637278 ADGRL2O95490 1459 aa10.09□□□□□ -0.79
CLN5-217ENST00000637278 KIF15Q9NS87 1388 aa10.09□□□□□ -0.79
CLN5-217ENST00000637278 UBR1Q8IWV7 1749 aa10.09□□□□□ -0.79
CLN5-217ENST00000637278 RRP9O43818 475 aaKnown RBP10.09□□□□□ -0.79
CLN5-217ENST00000637278 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
CLN5-217ENST00000637278 VGLL3A8MV65 326 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 NEFMP07197 916 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 HIRIP3Q9BW71 556 aaPredicted RBP10.08□□□□□ -0.8
CLN5-217ENST00000637278 ANKRD30AQ9BXX3 1397 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 ABCC5O15440 1437 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 VWDEQ8N2E2 1590 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 SCNN1AP37088 669 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 AMOTL2Q9Y2J4 779 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 NPHP4O75161 1426 aaPredicted RBP10.08□□□□□ -0.8
CLN5-217ENST00000637278 C9orf131Q5VYM1 1079 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 ANKLE2Q86XL3 938 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 HDAC5Q9UQL6 1122 aa10.08□□□□□ -0.8
CLN5-217ENST00000637278 SLIT1O75093 1534 aa10.07□□□□□ -0.8
CLN5-217ENST00000637278 GDPD2Q9HCC8 539 aa10.07□□□□□ -0.8
CLN5-217ENST00000637278 CLGNO14967 610 aa10.07□□□□□ -0.8
CLN5-217ENST00000637278 CCDC102AQ96A19 550 aa10.07□□□□□ -0.8
CLN5-217ENST00000637278 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.07□□□□□ -0.8
CLN5-217ENST00000637278 SETQ01105 290 aaPredicted RBP10.06□□□□□ -0.8
CLN5-217ENST00000637278 KANK4Q5T7N3 995 aaPredicted RBP10.06□□□□□ -0.8
CLN5-217ENST00000637278 ANKRD13AQ8IZ07 590 aa10.06□□□□□ -0.8
CLN5-217ENST00000637278 APBB1IPQ7Z5R6 666 aaPredicted RBP10.06□□□□□ -0.8
CLN5-217ENST00000637278 ARHGAP23Q9P227 1491 aa10.06□□□□□ -0.8
CLN5-217ENST00000637278 RPRD2Q5VT52 1461 aaKnown RBP10.05□□□□□ -0.8
CLN5-217ENST00000637278 APPP05067 770 aa10.05□□□□□ -0.8
CLN5-217ENST00000637278 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
CLN5-217ENST00000637278 EFCAB6Q5THR3 1501 aa10.05□□□□□ -0.8
CLN5-217ENST00000637278 ZNF335Q9H4Z2 1342 aaPredicted RBP10.05□□□□□ -0.8
CLN5-217ENST00000637278 TTLL12Q14166 644 aaPredicted RBP10.04□□□□□ -0.8
CLN5-217ENST00000637278 SCAF11Q99590 1463 aaKnown RBP10.04□□□□□ -0.8
CLN5-217ENST00000637278 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
CLN5-217ENST00000637278 TCF3P15923 654 aa10.03□□□□□ -0.8
CLN5-217ENST00000637278 GABBR1Q9UBS5 961 aa10.03□□□□□ -0.8
CLN5-217ENST00000637278 GCC2Q8IWJ2 1684 aa10.03□□□□□ -0.8
CLN5-217ENST00000637278 DIEXFQ68CQ4 756 aaKnown RBP10.03□□□□□ -0.8
CLN5-217ENST00000637278 GLMNQ92990 594 aa10.03□□□□□ -0.8
CLN5-217ENST00000637278 CDCA7Q9BWT1 371 aaPredicted RBP10.03□□□□□ -0.8
CLN5-217ENST00000637278 TET3O43151 1660 aa10.03□□□□□ -0.8
CLN5-217ENST00000637278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLN5-217ENST00000637278 UNC13BO14795 1591 aa10.02□□□□□ -0.8
CLN5-217ENST00000637278 TPD52L2O43399 206 aaKnown RBP10.02□□□□□ -0.8
CLN5-217ENST00000637278 ZNF16P17020 682 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms