RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 UNC5CLQ8IV45 518 aa13.82□□□□□ -0.2
CACNA1A-236ENST00000637117 STK26Q9P289 416 aa13.82□□□□□ -0.2
CACNA1A-236ENST00000637117 NAIPQ13075 1403 aa13.81□□□□□ -0.2
CACNA1A-236ENST00000637117 PXDNQ92626 1479 aa13.8□□□□□ -0.2
CACNA1A-236ENST00000637117 ADGRF5Q8IZF2 1346 aa13.79□□□□□ -0.2
CACNA1A-236ENST00000637117 KRT28Q7Z3Y7 464 aa13.78□□□□□ -0.2
CACNA1A-236ENST00000637117 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
CACNA1A-236ENST00000637117 PYGBP11216 843 aa13.77□□□□□ -0.21
CACNA1A-236ENST00000637117 RGL3Q3MIN7 710 aa13.77□□□□□ -0.21
CACNA1A-236ENST00000637117 CDC42BPGQ6DT37 1551 aa13.77□□□□□ -0.21
CACNA1A-236ENST00000637117 TMEM132EQ6IEE7 984 aa13.77□□□□□ -0.21
CACNA1A-236ENST00000637117 DEFB132Q7Z7B7 95 aa13.77□□□□□ -0.21
CACNA1A-236ENST00000637117 EP400Q96L91 3159 aa13.77□□□□□ -0.21
CACNA1A-236ENST00000637117 MARF1Q9Y4F3 1742 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-236ENST00000637117 PPLO60437 1756 aa13.76□□□□□ -0.21
CACNA1A-236ENST00000637117 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
CACNA1A-236ENST00000637117 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-236ENST00000637117 SF3B2Q13435 895 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-236ENST00000637117 SEPT12Q8IYM1 358 aa13.76□□□□□ -0.21
CACNA1A-236ENST00000637117 SLIT2O94813 1529 aa13.75□□□□□ -0.21
CACNA1A-236ENST00000637117 ABCC11Q96J66 1382 aa13.75□□□□□ -0.21
CACNA1A-236ENST00000637117 PRKCSHP14314 528 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-236ENST00000637117 RRBP1Q9P2E9 1410 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-236ENST00000637117 PLEKHH1Q9ULM0 1364 aa13.74□□□□□ -0.21
CACNA1A-236ENST00000637117 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-236ENST00000637117 PSME1Q06323 249 aa13.74□□□□□ -0.21
CACNA1A-236ENST00000637117 TECPR2O15040 1411 aa13.73□□□□□ -0.21
CACNA1A-236ENST00000637117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-236ENST00000637117 ONECUT3O60422 494 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-236ENST00000637117 VPS72Q15906 364 aa13.73□□□□□ -0.21
CACNA1A-236ENST00000637117 CABLES1Q8TDN4 633 aa13.73□□□□□ -0.21
CACNA1A-236ENST00000637117 ZFP91Q96JP5 570 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-236ENST00000637117 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-236ENST00000637117 GLI3P10071 1580 aa13.73□□□□□ -0.21
CACNA1A-236ENST00000637117 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-236ENST00000637117 ANKRD30BQ9BXX2 1392 aa13.72□□□□□ -0.21
CACNA1A-236ENST00000637117 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
CACNA1A-236ENST00000637117 SGIP1Q9BQI5 828 aa13.72□□□□□ -0.21
CACNA1A-236ENST00000637117 PHF8Q9UPP1 1060 aa13.72□□□□□ -0.21
CACNA1A-236ENST00000637117 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-236ENST00000637117 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
CACNA1A-236ENST00000637117 CCDC144AA2RUR9 1427 aa13.72□□□□□ -0.21
CACNA1A-236ENST00000637117 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
CACNA1A-236ENST00000637117 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
CACNA1A-236ENST00000637117 LMOD2Q6P5Q4 547 aa13.7□□□□□ -0.22
CACNA1A-236ENST00000637117 BRWD3Q6RI45 1802 aa13.69□□□□□ -0.22
CACNA1A-236ENST00000637117 FAM83GA6ND36 823 aa13.69□□□□□ -0.22
CACNA1A-236ENST00000637117 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-236ENST00000637117 SPATA31E1Q6ZUB1 1445 aa13.68□□□□□ -0.22
CACNA1A-236ENST00000637117 MPHOSPH9Q99550 1183 aa13.68□□□□□ -0.22
CACNA1A-236ENST00000637117 C14orf93Q9H972 538 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-236ENST00000637117 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
CACNA1A-236ENST00000637117 FMN2Q9NZ56 1722 aa13.67□□□□□ -0.22
CACNA1A-236ENST00000637117 TNS3Q68CZ2 1445 aa13.67□□□□□ -0.22
CACNA1A-236ENST00000637117 KIF1AQ12756 1690 aa13.67□□□□□ -0.22
CACNA1A-236ENST00000637117 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
CACNA1A-236ENST00000637117 A0A0G2JS52 829 aa13.66□□□□□ -0.22
CACNA1A-236ENST00000637117 PSDA5PKW4 1024 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-236ENST00000637117 BAG6P46379 1132 aa13.66□□□□□ -0.22
CACNA1A-236ENST00000637117 MYT1Q01538 1121 aa13.66□□□□□ -0.22
CACNA1A-236ENST00000637117 PIK3C2GO75747 1445 aa13.65□□□□□ -0.22
CACNA1A-236ENST00000637117 KNDC1Q76NI1 1749 aa13.65□□□□□ -0.22
CACNA1A-236ENST00000637117 SAFB2Q14151 953 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNA1A-236ENST00000637117 TPRNQ4KMQ1 711 aa13.65□□□□□ -0.22
CACNA1A-236ENST00000637117 CFAP70Q5T0N1 1121 aa13.65□□□□□ -0.22
CACNA1A-236ENST00000637117 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
CACNA1A-236ENST00000637117 ARHGEF10O15013 1369 aa13.65□□□□□ -0.22
CACNA1A-236ENST00000637117 DHX57Q6P158 1386 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-236ENST00000637117 RGPD8O14715 1765 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-236ENST00000637117 FAM98CQ17RN3 349 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-236ENST00000637117 PRAM1Q96QH2 718 aa13.64□□□□□ -0.23
CACNA1A-236ENST00000637117 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-236ENST00000637117 NRXN1Q9ULB1 1477 aa13.63□□□□□ -0.23
CACNA1A-236ENST00000637117 HRCP23327 699 aa13.63□□□□□ -0.23
CACNA1A-236ENST00000637117 RYDENQ9NUL5 291 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-236ENST00000637117 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
CACNA1A-236ENST00000637117 POGKQ9P215 609 aa13.63□□□□□ -0.23
CACNA1A-236ENST00000637117 NWD2Q9ULI1 1742 aa13.62□□□□□ -0.23
CACNA1A-236ENST00000637117 EN1Q05925 392 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-236ENST00000637117 NBR1Q14596 966 aa13.62□□□□□ -0.23
CACNA1A-236ENST00000637117 FARP1Q9Y4F1 1045 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-236ENST00000637117 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
CACNA1A-236ENST00000637117 PLCH1Q4KWH8 1693 aa13.6□□□□□ -0.23
CACNA1A-236ENST00000637117 FAM182BQ5T319 152 aa13.6□□□□□ -0.23
CACNA1A-236ENST00000637117 LRP5O75197 1615 aa13.6□□□□□ -0.23
CACNA1A-236ENST00000637117 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-236ENST00000637117 SPATA31A5Q5VU36 1347 aa13.58□□□□□ -0.24
CACNA1A-236ENST00000637117 SPATA31A7Q8IWB4 1347 aa13.58□□□□□ -0.24
CACNA1A-236ENST00000637117 GPRASP1Q5JY77 1395 aa13.58□□□□□ -0.24
CACNA1A-236ENST00000637117 ANKARQ7Z5J8 1434 aa13.57□□□□□ -0.24
CACNA1A-236ENST00000637117 R3HDM1Q15032 1099 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-236ENST00000637117 HIRIP3Q9BW71 556 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-236ENST00000637117 ABCA3Q99758 1704 aa13.56□□□□□ -0.24
CACNA1A-236ENST00000637117 TRAK1Q9UPV9 953 aa13.56□□□□□ -0.24
CACNA1A-236ENST00000637117 ACIN1Q9UKV3 1341 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-236ENST00000637117 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-236ENST00000637117 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-236ENST00000637117 EZH2Q15910 746 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-236ENST00000637117 NGDNQ8NEJ9 315 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-236ENST00000637117 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms