RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 PCDHB15Q9Y5E8 787 aa24.4■■□□□ 1.5
CLN5-216ENST00000636780 IQSEC2Q5JU85 1478 aa24.4■■□□□ 1.5
CLN5-216ENST00000636780 RIPK4P57078 832 aa24.4■■□□□ 1.5
CLN5-216ENST00000636780 PUS7Q96PZ0 661 aaKnown RBP24.39■■□□□ 1.5
CLN5-216ENST00000636780 ATAD2Q6PL18 1390 aa24.39■■□□□ 1.49
CLN5-216ENST00000636780 WDR63Q8IWG1 891 aa24.38■■□□□ 1.49
CLN5-216ENST00000636780 ZMYM3Q14202 1370 aa24.38■■□□□ 1.49
CLN5-216ENST00000636780 DIAPH1O60610 1272 aaKnown RBP24.38■■□□□ 1.49
CLN5-216ENST00000636780 RRS1Q15050 365 aaKnown RBP24.38■■□□□ 1.49
CLN5-216ENST00000636780 POLKQ9UBT6 870 aa24.38■■□□□ 1.49
CLN5-216ENST00000636780 SOX12O15370 315 aa24.37■■□□□ 1.49
CLN5-216ENST00000636780 C8orf34Q49A92 452 aa24.37■■□□□ 1.49
CLN5-216ENST00000636780 PHACTR3Q96KR7 559 aa24.37■■□□□ 1.49
CLN5-216ENST00000636780 MAPK8IP3Q9UPT6 1336 aa24.36■■□□□ 1.49
CLN5-216ENST00000636780 ARHGEF40Q8TER5 1519 aa24.36■■□□□ 1.49
CLN5-216ENST00000636780 PRKAR2BP31323 418 aa24.34■■□□□ 1.49
CLN5-216ENST00000636780 NLRP1Q9C000 1473 aa24.34■■□□□ 1.49
CLN5-216ENST00000636780 PDE3AQ14432 1141 aa24.34■■□□□ 1.49
CLN5-216ENST00000636780 SLC26A8Q96RN1 970 aa24.34■■□□□ 1.49
CLN5-216ENST00000636780 ELL2O00472 640 aaPredicted RBP24.33■■□□□ 1.49
CLN5-216ENST00000636780 NSD2O96028 1365 aa24.33■■□□□ 1.48
CLN5-216ENST00000636780 WASLO00401 505 aaPredicted RBP24.32■■□□□ 1.48
CLN5-216ENST00000636780 SSH1Q8WYL5 1049 aa24.32■■□□□ 1.48
CLN5-216ENST00000636780 SMC4Q9NTJ3 1288 aa24.32■■□□□ 1.48
CLN5-216ENST00000636780 NGEFQ8N5V2 710 aa24.31■■□□□ 1.48
CLN5-216ENST00000636780 NUDT16Q96DE0 195 aaKnown RBP24.31■■□□□ 1.48
CLN5-216ENST00000636780 MYH16Q9H6N6 1097 aa24.31■■□□□ 1.48
CLN5-216ENST00000636780 SEC24BO95487 1268 aa24.31■■□□□ 1.48
CLN5-216ENST00000636780 CCDC27Q2M243 656 aa24.3■■□□□ 1.48
CLN5-216ENST00000636780 LTKP29376 864 aa24.28■■□□□ 1.48
CLN5-216ENST00000636780 FAM161AQ3B820 660 aa24.28■■□□□ 1.48
CLN5-216ENST00000636780 USP32Q8NFA0 1604 aa24.28■■□□□ 1.48
CLN5-216ENST00000636780 COL3A1P02461 1466 aaPredicted RBP24.28■■□□□ 1.48
CLN5-216ENST00000636780 PPIP5K1Q6PFW1 1433 aa24.26■■□□□ 1.47
CLN5-216ENST00000636780 NOB1Q9ULX3 412 aaKnown RBP24.26■■□□□ 1.47
CLN5-216ENST00000636780 PRR36Q9H6K5 1346 aa24.26■■□□□ 1.47
CLN5-216ENST00000636780 DCTN1Q14203 1278 aa24.26■■□□□ 1.47
CLN5-216ENST00000636780 FAM83GA6ND36 823 aa24.25■■□□□ 1.47
CLN5-216ENST00000636780 TRIM27P14373 513 aa24.25■■□□□ 1.47
CLN5-216ENST00000636780 FTSJ3Q8IY81 847 aaKnown RBP24.25■■□□□ 1.47
CLN5-216ENST00000636780 RSPH6AQ9H0K4 717 aa24.24■■□□□ 1.47
CLN5-216ENST00000636780 NINLQ9Y2I6 1382 aa24.23■■□□□ 1.47
CLN5-216ENST00000636780 ITPRIPQ8IWB1 547 aa24.22■■□□□ 1.47
CLN5-216ENST00000636780 ZKSCAN2Q63HK3 967 aa24.22■■□□□ 1.47
CLN5-216ENST00000636780 TSPYL6Q8N831 410 aa24.22■■□□□ 1.47
CLN5-216ENST00000636780 DZIP1LQ8IYY4 767 aaKnown RBP24.21■■□□□ 1.47
CLN5-216ENST00000636780 PPP6R1Q9UPN7 881 aa24.21■■□□□ 1.47
CLN5-216ENST00000636780 PDZRN3Q9UPQ7 1066 aa24.21■■□□□ 1.47
CLN5-216ENST00000636780 ROBO2Q9HCK4 1378 aa24.21■■□□□ 1.47
CLN5-216ENST00000636780 SPATA31D1Q6ZQQ2 1576 aa24.2■■□□□ 1.47
CLN5-216ENST00000636780 CCDC61Q9Y6R9 512 aa24.2■■□□□ 1.46
CLN5-216ENST00000636780 DEKP35659 375 aaKnown RBP24.19■■□□□ 1.46
CLN5-216ENST00000636780 PMFBP1Q8TBY8 1022 aa24.19■■□□□ 1.46
CLN5-216ENST00000636780 AGLP35573 1532 aa24.19■■□□□ 1.46
CLN5-216ENST00000636780 MVPQ14764 893 aaKnown RBP24.19■■□□□ 1.46
CLN5-216ENST00000636780 AEBP1Q8IUX7 1158 aa24.19■■□□□ 1.46
CLN5-216ENST00000636780 TNRQ92752 1358 aa24.18■■□□□ 1.46
CLN5-216ENST00000636780 PNPLA6Q8IY17 1366 aa24.18■■□□□ 1.46
CLN5-216ENST00000636780 TMEM57Q8N5G2 664 aa24.18■■□□□ 1.46
CLN5-216ENST00000636780 CPS1P31327 1500 aa24.17■■□□□ 1.46
CLN5-216ENST00000636780 FCHSD2O94868 740 aa24.17■■□□□ 1.46
CLN5-216ENST00000636780 IL13P35225 146 aa24.17■■□□□ 1.46
CLN5-216ENST00000636780 COG3Q96JB2 828 aa24.17■■□□□ 1.46
CLN5-216ENST00000636780 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.16■■□□□ 1.46
CLN5-216ENST00000636780 RBM33Q96EV2 1170 aaKnown RBP24.16■■□□□ 1.46
CLN5-216ENST00000636780 NRXN3Q9Y4C0 1643 aa24.15■■□□□ 1.46
CLN5-216ENST00000636780 NEFMP07197 916 aa24.14■■□□□ 1.46
CLN5-216ENST00000636780 ADGRB2O60241 1585 aa24.14■■□□□ 1.45
CLN5-216ENST00000636780 ATF7IPQ6VMQ6 1270 aa24.13■■□□□ 1.45
CLN5-216ENST00000636780 C1orf115Q9H7X2 142 aa24.13■■□□□ 1.45
CLN5-216ENST00000636780 KIF13AQ9H1H9 1805 aa24.13■■□□□ 1.45
CLN5-216ENST00000636780 LRRC7Q96NW7 1537 aa24.13■■□□□ 1.45
CLN5-216ENST00000636780 KRT24Q2M2I5 525 aa24.12■■□□□ 1.45
CLN5-216ENST00000636780 TMEM2Q9UHN6 1383 aa24.12■■□□□ 1.45
CLN5-216ENST00000636780 CPSF1Q10570 1443 aaKnown RBP24.11■■□□□ 1.45
CLN5-216ENST00000636780 ACEP12821 1306 aa24.11■■□□□ 1.45
CLN5-216ENST00000636780 SETD1AO15047 1707 aaKnown RBP24.11■■□□□ 1.45
CLN5-216ENST00000636780 MAP2P11137 1827 aaKnown RBP24.11■■□□□ 1.45
CLN5-216ENST00000636780 NUTM2GQ5VZR2 741 aa24.1■■□□□ 1.45
CLN5-216ENST00000636780 USP19O94966 1318 aa24.1■■□□□ 1.45
CLN5-216ENST00000636780 NFE2L2Q16236 605 aa24.1■■□□□ 1.45
CLN5-216ENST00000636780 HSP90AB2PQ58FF8 381 aa24.1■■□□□ 1.45
CLN5-216ENST00000636780 PLEKHG5O94827 1062 aa24.08■■□□□ 1.45
CLN5-216ENST00000636780 MBIPQ9NS73 344 aa24.08■■□□□ 1.45
CLN5-216ENST00000636780 RTL5Q5HYW3 569 aaPredicted RBP24.08■■□□□ 1.45
CLN5-216ENST00000636780 SULT6B1Q6IMI4 303 aa24.08■■□□□ 1.45
CLN5-216ENST00000636780 C8orf58Q8NAV2 365 aa24.08■■□□□ 1.45
CLN5-216ENST00000636780 RWDD1Q9H446 243 aaPredicted RBP24.07■■□□□ 1.44
CLN5-216ENST00000636780 MED14O60244 1454 aa24.07■■□□□ 1.44
CLN5-216ENST00000636780 REREQ9P2R6 1566 aa24.07■■□□□ 1.44
CLN5-216ENST00000636780 AMOTL2Q9Y2J4 779 aa24.07■■□□□ 1.44
CLN5-216ENST00000636780 EDC4Q6P2E9 1401 aaKnown RBP24.06■■□□□ 1.44
CLN5-216ENST00000636780 ATP7BP35670 1465 aa24.06■■□□□ 1.44
CLN5-216ENST00000636780 FAM135BQ49AJ0 1406 aa24.06■■□□□ 1.44
CLN5-216ENST00000636780 HDGFP51858 240 aaKnown RBP24.06■■□□□ 1.44
CLN5-216ENST00000636780 MIS18AQ9NYP9 233 aa24.06■■□□□ 1.44
CLN5-216ENST00000636780 DAXXQ9UER7 740 aaPredicted RBP24.06■■□□□ 1.44
CLN5-216ENST00000636780 ADAMTS13Q76LX8 1427 aa24.05■■□□□ 1.44
CLN5-216ENST00000636780 KIF20BQ96Q89 1820 aa24.05■■□□□ 1.44
CLN5-216ENST00000636780 MCM10Q7L590 875 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms