RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 PLEKHF1Q96S99 279 aa9.09□□□□□ -0.95
GABRB3-221ENST00000636690 NOP58Q9Y2X3 529 aaKnown RBP9.09□□□□□ -0.95
GABRB3-221ENST00000636690 MINK1Q8N4C8 1332 aaPredicted RBP9.08□□□□□ -0.96
GABRB3-221ENST00000636690 MAPK8IP3Q9UPT6 1336 aa9.08□□□□□ -0.96
GABRB3-221ENST00000636690 WASLO00401 505 aaPredicted RBP9.08□□□□□ -0.96
GABRB3-221ENST00000636690 U2AF1L5P0DN76 240 aaPredicted RBP9.08□□□□□ -0.96
GABRB3-221ENST00000636690 PDE4AP27815 886 aa9.08□□□□□ -0.96
GABRB3-221ENST00000636690 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
GABRB3-221ENST00000636690 U2AF1Q01081 240 aaKnown RBP eCLIP9.08□□□□□ -0.96
GABRB3-221ENST00000636690 DDRGK1Q96HY6 314 aa9.08□□□□□ -0.96
GABRB3-221ENST00000636690 ZNF692Q9BU19 519 aaPredicted RBP9.08□□□□□ -0.96
GABRB3-221ENST00000636690 SPINK5Q9NQ38 1064 aaPredicted RBP9.08□□□□□ -0.96
GABRB3-221ENST00000636690 STK26Q9P289 416 aa9.08□□□□□ -0.96
GABRB3-221ENST00000636690 SLIT1O75093 1534 aa9.08□□□□□ -0.96
GABRB3-221ENST00000636690 ARHGAP23Q9P227 1491 aa9.08□□□□□ -0.96
GABRB3-221ENST00000636690 AKAP12Q02952 1782 aa9.07□□□□□ -0.96
GABRB3-221ENST00000636690 DIAPH1O60610 1272 aaKnown RBP9.07□□□□□ -0.96
GABRB3-221ENST00000636690 NEFMP07197 916 aa9.07□□□□□ -0.96
GABRB3-221ENST00000636690 NUTM2DQ5VT03 806 aaPredicted RBP9.07□□□□□ -0.96
GABRB3-221ENST00000636690 PMFBP1Q8TBY8 1022 aa9.07□□□□□ -0.96
GABRB3-221ENST00000636690 PTCH1Q13635 1447 aa9.06□□□□□ -0.96
GABRB3-221ENST00000636690 LRRC7Q96NW7 1537 aa9.06□□□□□ -0.96
GABRB3-221ENST00000636690 SENP3-EIF4A1A0A087X0R7 540 aa9.06□□□□□ -0.96
GABRB3-221ENST00000636690 TMPOP42166 694 aaKnown RBP9.06□□□□□ -0.96
GABRB3-221ENST00000636690 BRPF1P55201 1214 aaPredicted RBP9.06□□□□□ -0.96
GABRB3-221ENST00000636690 C20orf194Q5TEA3 1177 aa9.06□□□□□ -0.96
GABRB3-221ENST00000636690 CLUAP1Q96AJ1 413 aa9.06□□□□□ -0.96
GABRB3-221ENST00000636690 CABP1Q9NZU7 370 aa9.06□□□□□ -0.96
GABRB3-221ENST00000636690 CCDC61Q9Y6R9 512 aa9.06□□□□□ -0.96
GABRB3-221ENST00000636690 C3P01024 1663 aa9.06□□□□□ -0.96
GABRB3-221ENST00000636690 TOPAZ1Q8N9V7 1692 aa9.06□□□□□ -0.96
GABRB3-221ENST00000636690 ADAMTS13Q76LX8 1427 aa9.05□□□□□ -0.96
GABRB3-221ENST00000636690 ITSN1Q15811 1721 aa9.05□□□□□ -0.96
GABRB3-221ENST00000636690 METP08581 1390 aa9.05□□□□□ -0.96
GABRB3-221ENST00000636690 LMOD3Q0VAK6 560 aa9.05□□□□□ -0.96
GABRB3-221ENST00000636690 FAM161AQ3B820 660 aa9.05□□□□□ -0.96
GABRB3-221ENST00000636690 CHMP4BQ9H444 224 aaKnown RBP9.05□□□□□ -0.96
GABRB3-221ENST00000636690 KIF16BQ96L93 1317 aa9.05□□□□□ -0.96
GABRB3-221ENST00000636690 NRKQ7Z2Y5 1582 aa9.04□□□□□ -0.96
GABRB3-221ENST00000636690 PIK3R4Q99570 1358 aa9.04□□□□□ -0.96
GABRB3-221ENST00000636690 CANXP27824 592 aaKnown RBP9.04□□□□□ -0.96
GABRB3-221ENST00000636690 TNNT2P45379 298 aaPredicted RBP9.04□□□□□ -0.96
GABRB3-221ENST00000636690 ALDH1L2Q3SY69 923 aa9.04□□□□□ -0.96
GABRB3-221ENST00000636690 GGNBP2Q9H3C7 697 aa9.04□□□□□ -0.96
GABRB3-221ENST00000636690 ZBTB47Q9UFB7 747 aaPredicted RBP9.04□□□□□ -0.96
GABRB3-221ENST00000636690 RIMS1Q86UR5 1692 aaKnown RBP9.04□□□□□ -0.96
GABRB3-221ENST00000636690 BCAR3O75815 825 aa9.03□□□□□ -0.96
GABRB3-221ENST00000636690 SAFB2Q14151 953 aaKnown RBP eCLIP9.03□□□□□ -0.96
GABRB3-221ENST00000636690 ZKSCAN2Q63HK3 967 aa9.03□□□□□ -0.96
GABRB3-221ENST00000636690 DMRT2Q9Y5R5 561 aa9.03□□□□□ -0.96
GABRB3-221ENST00000636690 VIRMAQ69YN4 1812 aaKnown RBP9.03□□□□□ -0.96
GABRB3-221ENST00000636690 PLEKHG3A1L390 1219 aa9.02□□□□□ -0.97
GABRB3-221ENST00000636690 IPO8O15397 1037 aaKnown RBP9.02□□□□□ -0.97
GABRB3-221ENST00000636690 HAP1P54257 671 aaPredicted RBP9.02□□□□□ -0.97
GABRB3-221ENST00000636690 POLKQ9UBT6 870 aa9.02□□□□□ -0.97
GABRB3-221ENST00000636690 TRIM35Q9UPQ4 493 aa9.02□□□□□ -0.97
GABRB3-221ENST00000636690 EID1Q9Y6B2 187 aa9.02□□□□□ -0.97
GABRB3-221ENST00000636690 NALCNQ8IZF0 1738 aa9.02□□□□□ -0.97
GABRB3-221ENST00000636690 MVPQ14764 893 aaKnown RBP9.01□□□□□ -0.97
GABRB3-221ENST00000636690 ANKARQ7Z5J8 1434 aa9.01□□□□□ -0.97
GABRB3-221ENST00000636690 NUDT16Q96DE0 195 aaKnown RBP9.01□□□□□ -0.97
GABRB3-221ENST00000636690 COG3Q96JB2 828 aa9.01□□□□□ -0.97
GABRB3-221ENST00000636690 RSPH6AQ9H0K4 717 aa9.01□□□□□ -0.97
GABRB3-221ENST00000636690 RWDD1Q9H446 243 aaPredicted RBP9.01□□□□□ -0.97
GABRB3-221ENST00000636690 USP35Q9P2H5 1018 aa9.01□□□□□ -0.97
GABRB3-221ENST00000636690 TBX22Q9Y458 520 aa9.01□□□□□ -0.97
GABRB3-221ENST00000636690 TTC21AQ8NDW8 1320 aa9.01□□□□□ -0.97
GABRB3-221ENST00000636690 KIF24Q5T7B8 1368 aa9□□□□□ -0.97
GABRB3-221ENST00000636690 USP31Q70CQ4 1352 aa9□□□□□ -0.97
GABRB3-221ENST00000636690 OVOS2A0A0J9YW53 1432 aa9□□□□□ -0.97
GABRB3-221ENST00000636690 OVOS2Q6IE36 1432 aa9□□□□□ -0.97
GABRB3-221ENST00000636690 U2SURPO15042 1029 aaKnown RBP9□□□□□ -0.97
GABRB3-221ENST00000636690 NFE2L2Q16236 605 aa9□□□□□ -0.97
GABRB3-221ENST00000636690 WAPLQ7Z5K2 1190 aa9□□□□□ -0.97
GABRB3-221ENST00000636690 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
GABRB3-221ENST00000636690 ARHGAP45Q92619 1136 aa9□□□□□ -0.97
GABRB3-221ENST00000636690 DDX19BQ9UMR2 479 aa9□□□□□ -0.97
GABRB3-221ENST00000636690 MAP2P11137 1827 aaKnown RBP9□□□□□ -0.97
GABRB3-221ENST00000636690 USP54Q70EL1 1684 aa9□□□□□ -0.97
GABRB3-221ENST00000636690 USP6P35125 1406 aa8.99□□□□□ -0.97
GABRB3-221ENST00000636690 SSH2Q76I76 1423 aa8.99□□□□□ -0.97
GABRB3-221ENST00000636690 IL13P35225 146 aa8.99□□□□□ -0.97
GABRB3-221ENST00000636690 RIPK4P57078 832 aa8.99□□□□□ -0.97
GABRB3-221ENST00000636690 HDAC1Q13547 482 aaPredicted RBP8.99□□□□□ -0.97
GABRB3-221ENST00000636690 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
GABRB3-221ENST00000636690 RRP7AQ9Y3A4 280 aaKnown RBP8.99□□□□□ -0.97
GABRB3-221ENST00000636690 XRN1Q8IZH2 1706 aaKnown RBP8.99□□□□□ -0.97
GABRB3-221ENST00000636690 TTC21BQ7Z4L5 1316 aa8.99□□□□□ -0.97
GABRB3-221ENST00000636690 FER1L4A9Z1Z3 1794 aa8.99□□□□□ -0.97
GABRB3-221ENST00000636690 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
GABRB3-221ENST00000636690 PPM1GO15355 546 aaPredicted RBP8.98□□□□□ -0.97
GABRB3-221ENST00000636690 GNAI1P63096 354 aa8.98□□□□□ -0.97
GABRB3-221ENST00000636690 MLECQ14165 292 aa8.98□□□□□ -0.97
GABRB3-221ENST00000636690 NEUROD2Q15784 382 aa8.98□□□□□ -0.97
GABRB3-221ENST00000636690 C8orf34Q49A92 452 aa8.98□□□□□ -0.97
GABRB3-221ENST00000636690 ATF7IPQ6VMQ6 1270 aa8.98□□□□□ -0.97
GABRB3-221ENST00000636690 FTSJ3Q8IY81 847 aaKnown RBP8.98□□□□□ -0.97
GABRB3-221ENST00000636690 THEMISQ8N1K5 641 aaPredicted RBP8.98□□□□□ -0.97
GABRB3-221ENST00000636690 PTPRUQ92729 1446 aa8.97□□□□□ -0.97
GABRB3-221ENST00000636690 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms