RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 DAPK1P53355 1430 aa8.69□□□□□ -1.02
CLN5-210ENST00000636520 DDX46Q7L014 1031 aaKnown RBP8.69□□□□□ -1.02
CLN5-210ENST00000636520 FAM9BQ8IZU0 186 aa8.69□□□□□ -1.02
CLN5-210ENST00000636520 NLGN1Q8N2Q7 840 aa8.69□□□□□ -1.02
CLN5-210ENST00000636520 PDZRN3Q9UPQ7 1066 aa8.69□□□□□ -1.02
CLN5-210ENST00000636520 NBPF6Q5VWK0 638 aa8.68□□□□□ -1.02
CLN5-210ENST00000636520 NBPF5PQ86XG9 351 aaPredicted RBP8.68□□□□□ -1.02
CLN5-210ENST00000636520 IFNL2Q8IZJ0 200 aa8.68□□□□□ -1.02
CLN5-210ENST00000636520 NBPF4Q96M43 638 aa8.68□□□□□ -1.02
CLN5-210ENST00000636520 HMMRO75330 724 aa8.68□□□□□ -1.02
CLN5-210ENST00000636520 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
CLN5-210ENST00000636520 IKQ13123 557 aaPredicted RBP8.68□□□□□ -1.02
CLN5-210ENST00000636520 PRKAG2Q9UGJ0 569 aa8.68□□□□□ -1.02
CLN5-210ENST00000636520 ATF5Q9Y2D1 282 aaPredicted RBP8.68□□□□□ -1.02
CLN5-210ENST00000636520 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
CLN5-210ENST00000636520 ZFYVE16Q7Z3T8 1539 aa8.68□□□□□ -1.02
CLN5-210ENST00000636520 H7C1D1 291 aa8.68□□□□□ -1.02
CLN5-210ENST00000636520 IGHMBP2P38935 993 aaKnown RBP8.68□□□□□ -1.02
CLN5-210ENST00000636520 ATF7IPQ6VMQ6 1270 aa8.67□□□□□ -1.02
CLN5-210ENST00000636520 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
CLN5-210ENST00000636520 NAP1L2Q9ULW6 460 aaPredicted RBP8.67□□□□□ -1.02
CLN5-210ENST00000636520 HECW1Q76N89 1606 aa8.67□□□□□ -1.02
CLN5-210ENST00000636520 PTCD1O75127 700 aaKnown RBP8.67□□□□□ -1.02
CLN5-210ENST00000636520 TRIM37O94972 964 aa8.67□□□□□ -1.02
CLN5-210ENST00000636520 PSDA5PKW4 1024 aaPredicted RBP8.67□□□□□ -1.02
CLN5-210ENST00000636520 ATP6V1AP38606 617 aa8.67□□□□□ -1.02
CLN5-210ENST00000636520 CUL7Q14999 1698 aa8.67□□□□□ -1.02
CLN5-210ENST00000636520 EIF4G3O43432 1585 aaKnown RBP8.67□□□□□ -1.02
CLN5-210ENST00000636520 GJA3Q9Y6H8 435 aa8.67□□□□□ -1.02
CLN5-210ENST00000636520 PPP1R42Q7Z4L9 355 aa8.66□□□□□ -1.02
CLN5-210ENST00000636520 R3HCC1Q9Y3T6 440 aaKnown RBP8.66□□□□□ -1.02
CLN5-210ENST00000636520 TPTE2Q6XPS3 522 aa8.66□□□□□ -1.02
CLN5-210ENST00000636520 CABP1Q9NZU7 370 aa8.66□□□□□ -1.02
CLN5-210ENST00000636520 WDR97A6NE52 1622 aa8.66□□□□□ -1.02
CLN5-210ENST00000636520 RIMS2Q9UQ26 1411 aa8.66□□□□□ -1.02
CLN5-210ENST00000636520 DIEXFQ68CQ4 756 aaKnown RBP8.66□□□□□ -1.02
CLN5-210ENST00000636520 CCDC43Q96MW1 224 aaKnown RBP8.66□□□□□ -1.02
CLN5-210ENST00000636520 MPHOSPH6Q99547 160 aaKnown RBP8.66□□□□□ -1.02
CLN5-210ENST00000636520 NYXQ9GZU5 481 aa8.66□□□□□ -1.02
CLN5-210ENST00000636520 WASLO00401 505 aaPredicted RBP8.66□□□□□ -1.02
CLN5-210ENST00000636520 DHX16O60231 1041 aaKnown RBP8.66□□□□□ -1.02
CLN5-210ENST00000636520 ERBINQ96RT1 1412 aa8.66□□□□□ -1.02
CLN5-210ENST00000636520 KIF14Q15058 1648 aa8.66□□□□□ -1.02
CLN5-210ENST00000636520 CAPN15O75808 1086 aa8.65□□□□□ -1.02
CLN5-210ENST00000636520 R3HDM1Q15032 1099 aaKnown RBP8.65□□□□□ -1.02
CLN5-210ENST00000636520 ANKIB1Q9P2G1 1089 aa8.65□□□□□ -1.02
CLN5-210ENST00000636520 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
CLN5-210ENST00000636520 TMEM106CQ9BVX2 250 aa8.65□□□□□ -1.02
CLN5-210ENST00000636520 KTN1Q86UP2 1357 aaKnown RBP8.65□□□□□ -1.02
CLN5-210ENST00000636520 IQCA1LA6NCM1 817 aa8.65□□□□□ -1.02
CLN5-210ENST00000636520 TNNI2P48788 182 aa8.64□□□□□ -1.03
CLN5-210ENST00000636520 ECE1P42892 770 aa8.64□□□□□ -1.03
CLN5-210ENST00000636520 PEG3Q9GZU2 1588 aa8.64□□□□□ -1.03
CLN5-210ENST00000636520 SLC4A10Q6U841 1118 aa8.64□□□□□ -1.03
CLN5-210ENST00000636520 CNKSR1Q969H4 720 aa8.64□□□□□ -1.03
CLN5-210ENST00000636520 VTI1AQ96AJ9 217 aa8.64□□□□□ -1.03
CLN5-210ENST00000636520 GNPATO15228 680 aa8.64□□□□□ -1.03
CLN5-210ENST00000636520 ZRSR1Q15695 479 aaKnown RBP8.64□□□□□ -1.03
CLN5-210ENST00000636520 CEP170Q5SW79 1584 aa8.63□□□□□ -1.03
CLN5-210ENST00000636520 KANK4Q5T7N3 995 aaPredicted RBP8.63□□□□□ -1.03
CLN5-210ENST00000636520 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
CLN5-210ENST00000636520 TSPYL4Q9UJ04 414 aa8.63□□□□□ -1.03
CLN5-210ENST00000636520 SLC3A2P08195 630 aaKnown RBP8.63□□□□□ -1.03
CLN5-210ENST00000636520 CNNM1Q9NRU3 951 aa8.63□□□□□ -1.03
CLN5-210ENST00000636520 WAPLQ7Z5K2 1190 aa8.63□□□□□ -1.03
CLN5-210ENST00000636520 SLC16A10Q8TF71 515 aa8.63□□□□□ -1.03
CLN5-210ENST00000636520 AIMP1Q12904 312 aaKnown RBP8.62□□□□□ -1.03
CLN5-210ENST00000636520 CCDC27Q2M243 656 aa8.62□□□□□ -1.03
CLN5-210ENST00000636520 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
CLN5-210ENST00000636520 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
CLN5-210ENST00000636520 NLRP3Q96P20 1036 aa8.62□□□□□ -1.03
CLN5-210ENST00000636520 ZC3H12CQ9C0D7 883 aaKnown RBP8.62□□□□□ -1.03
CLN5-210ENST00000636520 KIF21BO75037 1637 aa8.62□□□□□ -1.03
CLN5-210ENST00000636520 KIAA1211Q6ZU35 1233 aa8.62□□□□□ -1.03
CLN5-210ENST00000636520 TTC21AQ8NDW8 1320 aa8.62□□□□□ -1.03
CLN5-210ENST00000636520 MPHOSPH10O00566 681 aaKnown RBP8.62□□□□□ -1.03
CLN5-210ENST00000636520 CABLES1Q8TDN4 633 aa8.62□□□□□ -1.03
CLN5-210ENST00000636520 NSD3Q9BZ95 1437 aa8.62□□□□□ -1.03
CLN5-210ENST00000636520 ANKRD24Q8TF21 1146 aa8.61□□□□□ -1.03
CLN5-210ENST00000636520 SSFA2P28290 1259 aa8.61□□□□□ -1.03
CLN5-210ENST00000636520 CDC5LQ99459 802 aaKnown RBP8.61□□□□□ -1.03
CLN5-210ENST00000636520 TBC1D2BQ9UPU7 963 aa8.61□□□□□ -1.03
CLN5-210ENST00000636520 SULF1Q8IWU6 871 aa8.6□□□□□ -1.03
CLN5-210ENST00000636520 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
CLN5-210ENST00000636520 APBB1O00213 710 aa8.6□□□□□ -1.03
CLN5-210ENST00000636520 GNL2Q13823 731 aaKnown RBP8.6□□□□□ -1.03
CLN5-210ENST00000636520 CCDC7Q96M83 1385 aa8.6□□□□□ -1.03
CLN5-210ENST00000636520 B4DLN1 442 aa8.6□□□□□ -1.03
CLN5-210ENST00000636520 MRPL12P52815 198 aaKnown RBP8.6□□□□□ -1.03
CLN5-210ENST00000636520 DDX10Q13206 875 aaKnown RBP8.6□□□□□ -1.03
CLN5-210ENST00000636520 NOL8Q76FK4 1167 aaKnown RBP8.6□□□□□ -1.03
CLN5-210ENST00000636520 NAIPQ13075 1403 aa8.6□□□□□ -1.03
CLN5-210ENST00000636520 KDM5BQ9UGL1 1544 aa8.6□□□□□ -1.03
CLN5-210ENST00000636520 PLIN1O60240 522 aa8.6□□□□□ -1.03
CLN5-210ENST00000636520 ALDH1B1P30837 517 aa8.6□□□□□ -1.03
CLN5-210ENST00000636520 DCPSQ96C86 337 aaKnown RBP8.6□□□□□ -1.03
CLN5-210ENST00000636520 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
CLN5-210ENST00000636520 DALRD3Q5D0E6 543 aaKnown RBP8.59□□□□□ -1.03
CLN5-210ENST00000636520 FMNL2Q96PY5 1086 aa8.59□□□□□ -1.03
CLN5-210ENST00000636520 KIAA1107Q9UPP5 1409 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms