RNA–Protein interactions for RNA: ENST00000636473.1

CACNA1A-226, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-226ENST00000636473 NRKQ7Z2Y5 1582 aa23.12■■□□□ 1.29
CACNA1A-226ENST00000636473 TRPM3Q9HCF6 1732 aaPredicted RBP23.12■■□□□ 1.29
CACNA1A-226ENST00000636473 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.29
CACNA1A-226ENST00000636473 SSH2Q76I76 1423 aa23.12■■□□□ 1.29
CACNA1A-226ENST00000636473 TTC21BQ7Z4L5 1316 aa23.11■■□□□ 1.29
CACNA1A-226ENST00000636473 COL16A1Q07092 1604 aaPredicted RBP23.1■■□□□ 1.29
CACNA1A-226ENST00000636473 SBNO1A3KN83 1393 aa23.09■■□□□ 1.29
CACNA1A-226ENST00000636473 BRD4O60885 1362 aaPredicted RBP23.09■■□□□ 1.29
CACNA1A-226ENST00000636473 HSPA1LP34931 641 aa23.08■■□□□ 1.29
CACNA1A-226ENST00000636473 LMOD2Q6P5Q4 547 aa23.08■■□□□ 1.29
CACNA1A-226ENST00000636473 TNS3Q68CZ2 1445 aa23.07■■□□□ 1.28
CACNA1A-226ENST00000636473 SPATA31A3Q5VYP0 1347 aa23.07■■□□□ 1.28
CACNA1A-226ENST00000636473 KNSTRNQ9Y448 316 aa23.07■■□□□ 1.28
CACNA1A-226ENST00000636473 TTC21AQ8NDW8 1320 aa23.07■■□□□ 1.28
CACNA1A-226ENST00000636473 PER1O15534 1290 aaPredicted RBP23.06■■□□□ 1.28
CACNA1A-226ENST00000636473 LRRC59Q96AG4 307 aaKnown RBP23.06■■□□□ 1.28
CACNA1A-226ENST00000636473 ABTB2Q8N961 1025 aa23.06■■□□□ 1.28
CACNA1A-226ENST00000636473 ALS2Q96Q42 1657 aa23.05■■□□□ 1.28
CACNA1A-226ENST00000636473 NME9Q86XW9 330 aa23.05■■□□□ 1.28
CACNA1A-226ENST00000636473 NUTM2GQ5VZR2 741 aa23.04■■□□□ 1.28
CACNA1A-226ENST00000636473 CGNL1Q0VF96 1302 aa23.04■■□□□ 1.28
CACNA1A-226ENST00000636473 PIK3C2AO00443 1686 aa23.03■■□□□ 1.28
CACNA1A-226ENST00000636473 FYB1O15117 783 aa23.02■■□□□ 1.28
CACNA1A-226ENST00000636473 ZRANB1Q9UGI0 708 aa23.02■■□□□ 1.28
CACNA1A-226ENST00000636473 ARHGEF10O15013 1369 aa23.01■■□□□ 1.27
CACNA1A-226ENST00000636473 KIF20BQ96Q89 1820 aa23.01■■□□□ 1.27
CACNA1A-226ENST00000636473 PLEKHG5O94827 1062 aa23■■□□□ 1.27
CACNA1A-226ENST00000636473 NLRP6P59044 892 aa23■■□□□ 1.27
CACNA1A-226ENST00000636473 GGNBP2Q9H3C7 697 aa23■■□□□ 1.27
CACNA1A-226ENST00000636473 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
CACNA1A-226ENST00000636473 CNGB1Q14028 1251 aaPredicted RBP22.99■■□□□ 1.27
CACNA1A-226ENST00000636473 PNPLA6Q8IY17 1366 aa22.98■■□□□ 1.27
CACNA1A-226ENST00000636473 NLRP13Q86W25 1043 aa22.97■■□□□ 1.27
CACNA1A-226ENST00000636473 USP31Q70CQ4 1352 aa22.97■■□□□ 1.27
CACNA1A-226ENST00000636473 CC2D1BQ5T0F9 858 aaKnown RBP22.97■■□□□ 1.27
CACNA1A-226ENST00000636473 JCADQ9P266 1359 aa22.96■■□□□ 1.27
CACNA1A-226ENST00000636473 COG3Q96JB2 828 aa22.96■■□□□ 1.27
CACNA1A-226ENST00000636473 OVOS2A0A0J9YW53 1432 aa22.95■■□□□ 1.26
CACNA1A-226ENST00000636473 OVOS2Q6IE36 1432 aa22.95■■□□□ 1.26
CACNA1A-226ENST00000636473 CABLES1Q8TDN4 633 aa22.95■■□□□ 1.26
CACNA1A-226ENST00000636473 NSD2O96028 1365 aa22.95■■□□□ 1.26
CACNA1A-226ENST00000636473 MARF1Q9Y4F3 1742 aaKnown RBP22.94■■□□□ 1.26
CACNA1A-226ENST00000636473 SHPRHQ149N8 1683 aa22.94■■□□□ 1.26
CACNA1A-226ENST00000636473 COL22A1Q8NFW1 1626 aaPredicted RBP22.93■■□□□ 1.26
CACNA1A-226ENST00000636473 USP54Q70EL1 1684 aa22.93■■□□□ 1.26
CACNA1A-226ENST00000636473 MED1Q15648 1581 aaPredicted RBP22.93■■□□□ 1.26
CACNA1A-226ENST00000636473 USP19O94966 1318 aa22.93■■□□□ 1.26
CACNA1A-226ENST00000636473 NPC1L1Q9UHC9 1359 aa22.93■■□□□ 1.26
CACNA1A-226ENST00000636473 ANKRD26Q9UPS8 1709 aa22.92■■□□□ 1.26
CACNA1A-226ENST00000636473 SOX12O15370 315 aa22.9■■□□□ 1.26
CACNA1A-226ENST00000636473 MORC1Q86VD1 984 aa22.9■■□□□ 1.26
CACNA1A-226ENST00000636473 CRYBG1Q9Y4K1 1723 aa22.9■■□□□ 1.26
CACNA1A-226ENST00000636473 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
CACNA1A-226ENST00000636473 PHRF1Q9P1Y6 1649 aaKnown RBP22.89■■□□□ 1.26
CACNA1A-226ENST00000636473 SLIT3O75094 1523 aa22.89■■□□□ 1.26
CACNA1A-226ENST00000636473 HAP1P54257 671 aaPredicted RBP22.89■■□□□ 1.25
CACNA1A-226ENST00000636473 ABCA3Q99758 1704 aa22.89■■□□□ 1.25
CACNA1A-226ENST00000636473 GCP02774 474 aa22.87■■□□□ 1.25
CACNA1A-226ENST00000636473 TNNT2P45379 298 aaPredicted RBP22.87■■□□□ 1.25
CACNA1A-226ENST00000636473 NUTM2BA6NNL0 878 aaPredicted RBP22.87■■□□□ 1.25
CACNA1A-226ENST00000636473 NUTM2EB1AL46 878 aaPredicted RBP22.87■■□□□ 1.25
CACNA1A-226ENST00000636473 NUTM2AQ8IVF1 878 aaPredicted RBP22.87■■□□□ 1.25
CACNA1A-226ENST00000636473 FBLN1P23142 703 aa22.86■■□□□ 1.25
CACNA1A-226ENST00000636473 KCNH5Q8NCM2 988 aa22.86■■□□□ 1.25
CACNA1A-226ENST00000636473 SPATA31A6Q5VVP1 1343 aa22.85■■□□□ 1.25
CACNA1A-226ENST00000636473 ILDR1Q86SU0 546 aaPredicted RBP22.85■■□□□ 1.25
CACNA1A-226ENST00000636473 NFAT5O94916 1531 aa22.83■■□□□ 1.25
CACNA1A-226ENST00000636473 ZC3H6P61129 1189 aaKnown RBP22.83■■□□□ 1.24
CACNA1A-226ENST00000636473 PARD3Q8TEW0 1356 aa22.81■■□□□ 1.24
CACNA1A-226ENST00000636473 ZBTB7CA1YPR0 619 aa22.81■■□□□ 1.24
CACNA1A-226ENST00000636473 ADAMTS2O95450 1211 aa22.81■■□□□ 1.24
CACNA1A-226ENST00000636473 RRS1Q15050 365 aaKnown RBP22.8■■□□□ 1.24
CACNA1A-226ENST00000636473 LRP6O75581 1613 aa22.8■■□□□ 1.24
CACNA1A-226ENST00000636473 AATKQ6ZMQ8 1374 aa22.79■■□□□ 1.24
CACNA1A-226ENST00000636473 KIAA0232Q92628 1395 aa22.79■■□□□ 1.24
CACNA1A-226ENST00000636473 PRKRIP1Q9H875 184 aaPredicted RBP22.79■■□□□ 1.24
CACNA1A-226ENST00000636473 ANP32CO43423 234 aa22.78■■□□□ 1.24
CACNA1A-226ENST00000636473 RALBP1Q15311 655 aa22.78■■□□□ 1.24
CACNA1A-226ENST00000636473 ARHGEF25Q86VW2 580 aa22.77■■□□□ 1.24
CACNA1A-226ENST00000636473 MAP3K19Q56UN5 1328 aa22.77■■□□□ 1.24
CACNA1A-226ENST00000636473 CPDO75976 1380 aa22.77■■□□□ 1.24
CACNA1A-226ENST00000636473 LTN1O94822 1766 aa22.77■■□□□ 1.24
CACNA1A-226ENST00000636473 PRDM11Q9NQV5 511 aa22.77■■□□□ 1.24
CACNA1A-226ENST00000636473 EMILIN1Q9Y6C2 1016 aa22.77■■□□□ 1.24
CACNA1A-226ENST00000636473 MAP2P11137 1827 aaKnown RBP22.77■■□□□ 1.24
CACNA1A-226ENST00000636473 CHRNA2Q15822 529 aa22.76■■□□□ 1.23
CACNA1A-226ENST00000636473 POLKQ9UBT6 870 aa22.76■■□□□ 1.23
CACNA1A-226ENST00000636473 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
CACNA1A-226ENST00000636473 PPP2R1AP30153 589 aa22.74■■□□□ 1.23
CACNA1A-226ENST00000636473 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
CACNA1A-226ENST00000636473 MEX3CQ5U5Q3 659 aaKnown RBP22.74■■□□□ 1.23
CACNA1A-226ENST00000636473 AMPHP49418 695 aa22.73■■□□□ 1.23
CACNA1A-226ENST00000636473 PEAK1Q9H792 1746 aa22.72■■□□□ 1.23
CACNA1A-226ENST00000636473 MTHFSP49914 203 aa22.71■■□□□ 1.23
CACNA1A-226ENST00000636473 C8orf37Q96NL8 207 aa22.71■■□□□ 1.23
CACNA1A-226ENST00000636473 MYBBP1AQ9BQG0 1328 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-226ENST00000636473 COL14A1Q05707 1796 aaKnown RBP22.7■■□□□ 1.22
CACNA1A-226ENST00000636473 SMG6Q86US8 1419 aaKnown RBP22.7■■□□□ 1.22
CACNA1A-226ENST00000636473 HOXC9P31274 260 aa22.7■■□□□ 1.22
CACNA1A-226ENST00000636473 IP6K1Q92551 441 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms