RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 MSH6P52701 1360 aa20.91■□□□□ 0.94
CHRNA7-212ENST00000636271 DCCP43146 1447 aa20.9■□□□□ 0.94
CHRNA7-212ENST00000636271 POLR3AO14802 1390 aaPredicted RBP20.9■□□□□ 0.94
CHRNA7-212ENST00000636271 ZNF692Q9BU19 519 aaPredicted RBP20.9■□□□□ 0.94
CHRNA7-212ENST00000636271 FYB1O15117 783 aa20.9■□□□□ 0.94
CHRNA7-212ENST00000636271 NGDNQ8NEJ9 315 aaKnown RBP20.9■□□□□ 0.94
CHRNA7-212ENST00000636271 PHF8Q9UPP1 1060 aa20.9■□□□□ 0.94
CHRNA7-212ENST00000636271 INSRP06213 1382 aa20.89■□□□□ 0.93
CHRNA7-212ENST00000636271 CADPS2Q86UW7 1296 aa20.89■□□□□ 0.93
CHRNA7-212ENST00000636271 C1orf167Q5SNV9 1468 aa20.89■□□□□ 0.93
CHRNA7-212ENST00000636271 MST1RQ04912 1400 aa20.89■□□□□ 0.93
CHRNA7-212ENST00000636271 EDC4Q6P2E9 1401 aaKnown RBP20.88■□□□□ 0.93
CHRNA7-212ENST00000636271 GGNBP2Q9H3C7 697 aa20.88■□□□□ 0.93
CHRNA7-212ENST00000636271 ITSN1Q15811 1721 aa20.88■□□□□ 0.93
CHRNA7-212ENST00000636271 USP6P35125 1406 aa20.87■□□□□ 0.93
CHRNA7-212ENST00000636271 LTBP4Q8N2S1 1624 aa20.87■□□□□ 0.93
CHRNA7-212ENST00000636271 SENP3-EIF4A1A0A087X0R7 540 aa20.86■□□□□ 0.93
CHRNA7-212ENST00000636271 PPP4R2Q9NY27 417 aa20.86■□□□□ 0.93
CHRNA7-212ENST00000636271 AKAP12Q02952 1782 aa20.86■□□□□ 0.93
CHRNA7-212ENST00000636271 NME9Q86XW9 330 aa20.85■□□□□ 0.93
CHRNA7-212ENST00000636271 MON2Q7Z3U7 1717 aa20.85■□□□□ 0.93
CHRNA7-212ENST00000636271 SSH2Q76I76 1423 aa20.85■□□□□ 0.93
CHRNA7-212ENST00000636271 TTC21BQ7Z4L5 1316 aa20.84■□□□□ 0.93
CHRNA7-212ENST00000636271 BLMP54132 1417 aaPredicted RBP20.84■□□□□ 0.93
CHRNA7-212ENST00000636271 MORC1Q86VD1 984 aa20.84■□□□□ 0.93
CHRNA7-212ENST00000636271 ZRANB1Q9UGI0 708 aa20.84■□□□□ 0.93
CHRNA7-212ENST00000636271 FOXO3O43524 673 aa20.83■□□□□ 0.93
CHRNA7-212ENST00000636271 RNF123Q5XPI4 1314 aa20.83■□□□□ 0.92
CHRNA7-212ENST00000636271 PPP2R1AP30153 589 aa20.83■□□□□ 0.92
CHRNA7-212ENST00000636271 TNNT2P45379 298 aaPredicted RBP20.83■□□□□ 0.92
CHRNA7-212ENST00000636271 NSD2O96028 1365 aa20.83■□□□□ 0.92
CHRNA7-212ENST00000636271 NRKQ7Z2Y5 1582 aa20.8■□□□□ 0.92
CHRNA7-212ENST00000636271 SLAIN2Q9P270 581 aa20.8■□□□□ 0.92
CHRNA7-212ENST00000636271 XPCQ01831 940 aaPredicted RBP20.79■□□□□ 0.92
CHRNA7-212ENST00000636271 PSME1Q06323 249 aa20.79■□□□□ 0.92
CHRNA7-212ENST00000636271 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
CHRNA7-212ENST00000636271 DDX17Q92841 729 aaKnown RBP20.79■□□□□ 0.92
CHRNA7-212ENST00000636271 BRINP3Q76B58 766 aa20.77■□□□□ 0.92
CHRNA7-212ENST00000636271 FBLN1P23142 703 aa20.76■□□□□ 0.91
CHRNA7-212ENST00000636271 PAK3O75914 559 aaPredicted RBP20.76■□□□□ 0.91
CHRNA7-212ENST00000636271 TTC21AQ8NDW8 1320 aa20.75■□□□□ 0.91
CHRNA7-212ENST00000636271 SALL2Q9Y467 1007 aaPredicted RBP20.75■□□□□ 0.91
CHRNA7-212ENST00000636271 KIF20BQ96Q89 1820 aa20.75■□□□□ 0.91
CHRNA7-212ENST00000636271 COG3Q96JB2 828 aa20.74■□□□□ 0.91
CHRNA7-212ENST00000636271 NUTM2GQ5VZR2 741 aa20.73■□□□□ 0.91
CHRNA7-212ENST00000636271 KRT28Q7Z3Y7 464 aa20.73■□□□□ 0.91
CHRNA7-212ENST00000636271 ADAMTS8Q9UP79 889 aa20.73■□□□□ 0.91
CHRNA7-212ENST00000636271 OVOS2A0A0J9YW53 1432 aa20.72■□□□□ 0.91
CHRNA7-212ENST00000636271 OVOS2Q6IE36 1432 aa20.72■□□□□ 0.91
CHRNA7-212ENST00000636271 KIF1AQ12756 1690 aa20.72■□□□□ 0.91
CHRNA7-212ENST00000636271 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHRNA7-212ENST00000636271 ABTB2Q8N961 1025 aa20.72■□□□□ 0.91
CHRNA7-212ENST00000636271 ANKRD26Q9UPS8 1709 aa20.71■□□□□ 0.91
CHRNA7-212ENST00000636271 MTHFSP49914 203 aa20.7■□□□□ 0.9
CHRNA7-212ENST00000636271 PIK3C2AO00443 1686 aa20.7■□□□□ 0.9
CHRNA7-212ENST00000636271 NLRP6P59044 892 aa20.7■□□□□ 0.9
CHRNA7-212ENST00000636271 B4GALNT3Q6L9W6 998 aa20.7■□□□□ 0.9
CHRNA7-212ENST00000636271 USP31Q70CQ4 1352 aa20.69■□□□□ 0.9
CHRNA7-212ENST00000636271 NPHP3Q7Z494 1330 aa20.69■□□□□ 0.9
CHRNA7-212ENST00000636271 RCAN3Q9UKA8 241 aa20.67■□□□□ 0.9
CHRNA7-212ENST00000636271 POLKQ9UBT6 870 aa20.66■□□□□ 0.9
CHRNA7-212ENST00000636271 SOX12O15370 315 aa20.66■□□□□ 0.9
CHRNA7-212ENST00000636271 CDCA7LQ96GN5 454 aa20.66■□□□□ 0.9
CHRNA7-212ENST00000636271 PXDNQ92626 1479 aa20.65■□□□□ 0.9
CHRNA7-212ENST00000636271 RRS1Q15050 365 aaKnown RBP20.65■□□□□ 0.9
CHRNA7-212ENST00000636271 TRPM3Q9HCF6 1732 aaPredicted RBP20.65■□□□□ 0.9
CHRNA7-212ENST00000636271 LMOD2Q6P5Q4 547 aa20.65■□□□□ 0.9
CHRNA7-212ENST00000636271 EMILIN1Q9Y6C2 1016 aa20.65■□□□□ 0.9
CHRNA7-212ENST00000636271 AATKQ6ZMQ8 1374 aa20.64■□□□□ 0.89
CHRNA7-212ENST00000636271 RRP1P56182 461 aaKnown RBP20.64■□□□□ 0.89
CHRNA7-212ENST00000636271 RBM19Q9Y4C8 960 aaKnown RBP20.63■□□□□ 0.89
CHRNA7-212ENST00000636271 PPM1GO15355 546 aaPredicted RBP20.62■□□□□ 0.89
CHRNA7-212ENST00000636271 SOS2Q07890 1332 aaPredicted RBP20.62■□□□□ 0.89
CHRNA7-212ENST00000636271 SBNO1A3KN83 1393 aa20.62■□□□□ 0.89
CHRNA7-212ENST00000636271 MARF1Q9Y4F3 1742 aaKnown RBP20.61■□□□□ 0.89
CHRNA7-212ENST00000636271 PLEKHG5O94827 1062 aa20.61■□□□□ 0.89
CHRNA7-212ENST00000636271 SPATA31A3Q5VYP0 1347 aa20.6■□□□□ 0.89
CHRNA7-212ENST00000636271 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
CHRNA7-212ENST00000636271 CCDC136Q96JN2 1154 aa20.58■□□□□ 0.89
CHRNA7-212ENST00000636271 TNS3Q68CZ2 1445 aa20.58■□□□□ 0.89
CHRNA7-212ENST00000636271 USP54Q70EL1 1684 aa20.58■□□□□ 0.88
CHRNA7-212ENST00000636271 ALS2Q96Q42 1657 aa20.58■□□□□ 0.88
CHRNA7-212ENST00000636271 MAP3K19Q56UN5 1328 aa20.57■□□□□ 0.88
CHRNA7-212ENST00000636271 TOM1O60784 492 aa20.57■□□□□ 0.88
CHRNA7-212ENST00000636271 CERKQ8TCT0 537 aa20.57■□□□□ 0.88
CHRNA7-212ENST00000636271 CFAP53Q96M91 514 aa20.57■□□□□ 0.88
CHRNA7-212ENST00000636271 ROBO1Q9Y6N7 1651 aa20.57■□□□□ 0.88
CHRNA7-212ENST00000636271 ZNF521Q96K83 1311 aa20.57■□□□□ 0.88
CHRNA7-212ENST00000636271 MAP2P11137 1827 aaKnown RBP20.57■□□□□ 0.88
CHRNA7-212ENST00000636271 COL3A1P02461 1466 aaPredicted RBP20.56■□□□□ 0.88
CHRNA7-212ENST00000636271 USP19O94966 1318 aa20.56■□□□□ 0.88
CHRNA7-212ENST00000636271 UBAP1LF5GYI3 381 aa20.56■□□□□ 0.88
CHRNA7-212ENST00000636271 PIP4K2BP78356 416 aa20.56■□□□□ 0.88
CHRNA7-212ENST00000636271 GCP02774 474 aa20.55■□□□□ 0.88
CHRNA7-212ENST00000636271 CABLES1Q8TDN4 633 aa20.55■□□□□ 0.88
CHRNA7-212ENST00000636271 NHSL1Q5SYE7 1610 aa20.54■□□□□ 0.88
CHRNA7-212ENST00000636271 CCDC146Q8IYE0 955 aa20.53■□□□□ 0.88
CHRNA7-212ENST00000636271 MED1Q15648 1581 aaPredicted RBP20.53■□□□□ 0.88
CHRNA7-212ENST00000636271 NFAT5O94916 1531 aa20.53■□□□□ 0.88
CHRNA7-212ENST00000636271 CDK12Q9NYV4 1490 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms