RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	CDK19	Q9BWU1	502 aa		10.62	□□□□□ -0.71
CACNA1A-222	ENST00000636022	CRYBG1	Q9Y4K1	1723 aa		10.61	□□□□□ -0.71
CACNA1A-222	ENST00000636022	TOPAZ1	Q8N9V7	1692 aa		10.61	□□□□□ -0.71
CACNA1A-222	ENST00000636022	PLEKHG5	O94827	1062 aa		10.61	□□□□□ -0.71
CACNA1A-222	ENST00000636022	HAP1	P54257	671 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNA1A-222	ENST00000636022	NGDN	Q8NEJ9	315 aa	Known RBP	10.61	□□□□□ -0.71
CACNA1A-222	ENST00000636022	BRWD3	Q6RI45	1802 aa		10.61	□□□□□ -0.71
CACNA1A-222	ENST00000636022	ONECUT3	O60422	494 aa	Predicted RBP	10.6	□□□□□ -0.71
CACNA1A-222	ENST00000636022	L3MBTL2	Q969R5	705 aa		10.6	□□□□□ -0.71
CACNA1A-222	ENST00000636022	POLR3A	O14802	1390 aa	Predicted RBP	10.6	□□□□□ -0.71
CACNA1A-222	ENST00000636022	NRAP	Q86VF7	1730 aa		10.59	□□□□□ -0.71
CACNA1A-222	ENST00000636022	PLEKHG3	A1L390	1219 aa		10.59	□□□□□ -0.71
CACNA1A-222	ENST00000636022	DCAF8L1	A6NGE4	600 aa		10.59	□□□□□ -0.71
CACNA1A-222	ENST00000636022	CCDC61	Q9Y6R9	512 aa		10.59	□□□□□ -0.71
CACNA1A-222	ENST00000636022	COL14A1	Q05707	1796 aa	Known RBP	10.59	□□□□□ -0.71
CACNA1A-222	ENST00000636022	PAK3	O75914	559 aa	Predicted RBP	10.58	□□□□□ -0.72
CACNA1A-222	ENST00000636022	NBPF8	Q3BBV2	869 aa		10.58	□□□□□ -0.72
CACNA1A-222	ENST00000636022	SIN3A	Q96ST3	1273 aa		10.58	□□□□□ -0.72
CACNA1A-222	ENST00000636022	ACE	P12821	1306 aa		10.58	□□□□□ -0.72
CACNA1A-222	ENST00000636022	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.58	□□□□□ -0.72
CACNA1A-222	ENST00000636022	CCDC125	Q86Z20	511 aa		10.57	□□□□□ -0.72
CACNA1A-222	ENST00000636022	SEPT12	Q8IYM1	358 aa		10.57	□□□□□ -0.72
CACNA1A-222	ENST00000636022	BTG4	Q9NY30	223 aa		10.57	□□□□□ -0.72
CACNA1A-222	ENST00000636022	QRICH2	Q9H0J4	1663 aa		10.56	□□□□□ -0.72
CACNA1A-222	ENST00000636022	TRPM1	Q7Z4N2	1603 aa		10.55	□□□□□ -0.72
CACNA1A-222	ENST00000636022	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.55	□□□□□ -0.72
CACNA1A-222	ENST00000636022	KIAA0232	Q92628	1395 aa		10.54	□□□□□ -0.72
CACNA1A-222	ENST00000636022	BLM	P54132	1417 aa	Predicted RBP	10.54	□□□□□ -0.72
CACNA1A-222	ENST00000636022	PPIP5K1	Q6PFW1	1433 aa		10.54	□□□□□ -0.72
CACNA1A-222	ENST00000636022	CABP2	Q9NPB3	220 aa		10.54	□□□□□ -0.72
CACNA1A-222	ENST00000636022	PRDM11	Q9NQV5	511 aa		10.54	□□□□□ -0.72
CACNA1A-222	ENST00000636022	CCDC9	Q9Y3X0	531 aa	Known RBP	10.54	□□□□□ -0.72
CACNA1A-222	ENST00000636022	SPATA31A5	Q5VU36	1347 aa		10.54	□□□□□ -0.72
CACNA1A-222	ENST00000636022	SPATA31A7	Q8IWB4	1347 aa		10.54	□□□□□ -0.72
CACNA1A-222	ENST00000636022	SRPK2	P78362	688 aa	Known RBP	10.53	□□□□□ -0.72
CACNA1A-222	ENST00000636022	NEUROD1	Q13562	356 aa		10.53	□□□□□ -0.72
CACNA1A-222	ENST00000636022	FAM98C	Q17RN3	349 aa	Known RBP	10.53	□□□□□ -0.72
CACNA1A-222	ENST00000636022	NUTM2G	Q5VZR2	741 aa		10.53	□□□□□ -0.72
CACNA1A-222	ENST00000636022	KRT27	Q7Z3Y8	459 aa		10.53	□□□□□ -0.72
CACNA1A-222	ENST00000636022	RNF216	Q9NWF9	866 aa	Predicted RBP	10.53	□□□□□ -0.72
CACNA1A-222	ENST00000636022	CHRNA2	Q15822	529 aa		10.52	□□□□□ -0.73
CACNA1A-222	ENST00000636022	ABTB2	Q8N961	1025 aa		10.52	□□□□□ -0.73
CACNA1A-222	ENST00000636022	USP19	O94966	1318 aa		10.52	□□□□□ -0.73
CACNA1A-222	ENST00000636022	NRK	Q7Z2Y5	1582 aa		10.52	□□□□□ -0.73
CACNA1A-222	ENST00000636022	THSD7A	Q9UPZ6	1657 aa		10.51	□□□□□ -0.73
CACNA1A-222	ENST00000636022	ZC3H6	P61129	1189 aa	Known RBP	10.51	□□□□□ -0.73
CACNA1A-222	ENST00000636022	CABP1	Q9NZU7	370 aa		10.51	□□□□□ -0.73
CACNA1A-222	ENST00000636022	BRD4	O60885	1362 aa	Predicted RBP	10.51	□□□□□ -0.73
CACNA1A-222	ENST00000636022	ROCK2	O75116	1388 aa	Known RBP	10.51	□□□□□ -0.73
CACNA1A-222	ENST00000636022	CPD	O75976	1380 aa		10.51	□□□□□ -0.73
CACNA1A-222	ENST00000636022	SSH2	Q76I76	1423 aa		10.5	□□□□□ -0.73
CACNA1A-222	ENST00000636022	DEFB132	Q7Z7B7	95 aa		10.5	□□□□□ -0.73
CACNA1A-222	ENST00000636022	SPATA31A1	Q5TZJ5	1347 aa		10.5	□□□□□ -0.73
CACNA1A-222	ENST00000636022	EVC2	Q86UK5	1308 aa		10.5	□□□□□ -0.73
CACNA1A-222	ENST00000636022	LMO7	Q8WWI1	1683 aa		10.5	□□□□□ -0.73
CACNA1A-222	ENST00000636022	CAMTA1	Q9Y6Y1	1673 aa		10.5	□□□□□ -0.73
CACNA1A-222	ENST00000636022	USP6	P35125	1406 aa		10.5	□□□□□ -0.73
CACNA1A-222	ENST00000636022	HOXD11	P31277	338 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNA1A-222	ENST00000636022	ZRANB1	Q9UGI0	708 aa		10.49	□□□□□ -0.73
CACNA1A-222	ENST00000636022		A0A0G2JS52	829 aa		10.48	□□□□□ -0.73
CACNA1A-222	ENST00000636022	GC	P02774	474 aa		10.48	□□□□□ -0.73
CACNA1A-222	ENST00000636022	MYT1	Q01538	1121 aa		10.48	□□□□□ -0.73
CACNA1A-222	ENST00000636022	NLRP13	Q86W25	1043 aa		10.48	□□□□□ -0.73
CACNA1A-222	ENST00000636022	STRN4	Q9NRL3	753 aa		10.48	□□□□□ -0.73
CACNA1A-222	ENST00000636022	PIK3C2A	O00443	1686 aa		10.47	□□□□□ -0.73
CACNA1A-222	ENST00000636022	FAM182B	Q5T319	152 aa		10.47	□□□□□ -0.73
CACNA1A-222	ENST00000636022	SBNO2	Q9Y2G9	1366 aa		10.47	□□□□□ -0.73
CACNA1A-222	ENST00000636022	SLIT3	O75094	1523 aa		10.47	□□□□□ -0.73
CACNA1A-222	ENST00000636022	AKAP12	Q02952	1782 aa		10.47	□□□□□ -0.73
CACNA1A-222	ENST00000636022	NLRP6	P59044	892 aa		10.46	□□□□□ -0.73
CACNA1A-222	ENST00000636022	SF3B2	Q13435	895 aa	Known RBP	10.46	□□□□□ -0.73
CACNA1A-222	ENST00000636022	LARP1	Q6PKG0	1096 aa	Known RBP	10.46	□□□□□ -0.73
CACNA1A-222	ENST00000636022	BARGIN	Q6ZT62	677 aa		10.46	□□□□□ -0.73
CACNA1A-222	ENST00000636022	COL18A1	P39060	1754 aa		10.45	□□□□□ -0.74
CACNA1A-222	ENST00000636022	RGPD1	P0DJD0	1748 aa		10.45	□□□□□ -0.74
CACNA1A-222	ENST00000636022	COL5A2	P05997	1499 aa	Predicted RBP	10.45	□□□□□ -0.74
CACNA1A-222	ENST00000636022	CPSF1	Q10570	1443 aa	Known RBP	10.45	□□□□□ -0.74
CACNA1A-222	ENST00000636022	EVA1C	P58658	441 aa		10.45	□□□□□ -0.74
CACNA1A-222	ENST00000636022	AATK	Q6ZMQ8	1374 aa		10.44	□□□□□ -0.74
CACNA1A-222	ENST00000636022	TTC21B	Q7Z4L5	1316 aa		10.44	□□□□□ -0.74
CACNA1A-222	ENST00000636022	ZNF692	Q9BU19	519 aa	Predicted RBP	10.44	□□□□□ -0.74
CACNA1A-222	ENST00000636022	USP35	Q9P2H5	1018 aa		10.44	□□□□□ -0.74
CACNA1A-222	ENST00000636022	TNS1	Q9HBL0	1735 aa	Known RBP	10.44	□□□□□ -0.74
CACNA1A-222	ENST00000636022	BAG6	P46379	1132 aa		10.43	□□□□□ -0.74
CACNA1A-222	ENST00000636022	TCP11L2	Q8N4U5	519 aa		10.43	□□□□□ -0.74
CACNA1A-222	ENST00000636022	CARD11	Q9BXL7	1154 aa		10.43	□□□□□ -0.74
CACNA1A-222	ENST00000636022	THRAP3	Q9Y2W1	955 aa	Known RBP	10.43	□□□□□ -0.74
CACNA1A-222	ENST00000636022	DISP2	A7MBM2	1401 aa		10.42	□□□□□ -0.74
CACNA1A-222	ENST00000636022	TONSL	Q96HA7	1378 aa		10.42	□□□□□ -0.74
CACNA1A-222	ENST00000636022	MON2	Q7Z3U7	1717 aa		10.42	□□□□□ -0.74
CACNA1A-222	ENST00000636022	TTC21A	Q8NDW8	1320 aa		10.42	□□□□□ -0.74
CACNA1A-222	ENST00000636022	FAM196A	Q6ZSG2	479 aa		10.42	□□□□□ -0.74
CACNA1A-222	ENST00000636022	AXIN2	Q9Y2T1	843 aa		10.42	□□□□□ -0.74
CACNA1A-222	ENST00000636022	CD163L1	Q9NR16	1453 aa		10.42	□□□□□ -0.74
CACNA1A-222	ENST00000636022	CRB1	P82279	1406 aa		10.41	□□□□□ -0.74
CACNA1A-222	ENST00000636022	PARP4	Q9UKK3	1724 aa	Known RBP	10.41	□□□□□ -0.74
CACNA1A-222	ENST00000636022	KTN1	Q86UP2	1357 aa	Known RBP	10.41	□□□□□ -0.74
CACNA1A-222	ENST00000636022	EN1	Q05925	392 aa	Predicted RBP	10.41	□□□□□ -0.74
CACNA1A-222	ENST00000636022	TRIM26	Q12899	539 aa	Predicted RBP	10.41	□□□□□ -0.74
CACNA1A-222	ENST00000636022	ARHGEF25	Q86VW2	580 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms