RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ERCC6L2Q5T890 1561 aa18.57■□□□□ 0.56
CACNA1A-220ENST00000635988 ANKRD36BQ8N2N9 1353 aa18.57■□□□□ 0.56
CACNA1A-220ENST00000635988 MROH2AA6NES4 1674 aa18.57■□□□□ 0.56
CACNA1A-220ENST00000635988 KIF16BQ96L93 1317 aa18.57■□□□□ 0.56
CACNA1A-220ENST00000635988 SSH1Q8WYL5 1049 aa18.56■□□□□ 0.56
CACNA1A-220ENST00000635988 TRIM44Q96DX7 344 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-220ENST00000635988 ZBTB40Q9NUA8 1239 aa18.56■□□□□ 0.56
CACNA1A-220ENST00000635988 LMTK2Q8IWU2 1503 aa18.55■□□□□ 0.56
CACNA1A-220ENST00000635988 NUCB1Q02818 461 aa18.55■□□□□ 0.56
CACNA1A-220ENST00000635988 HSP90AB1P08238 724 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-220ENST00000635988 TSR2Q969E8 191 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-220ENST00000635988 ADGRB1O14514 1584 aa18.54■□□□□ 0.56
CACNA1A-220ENST00000635988 TNPO1Q92973 898 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-220ENST00000635988 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
CACNA1A-220ENST00000635988 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
CACNA1A-220ENST00000635988 RPGRIP1LQ68CZ1 1315 aa18.53■□□□□ 0.56
CACNA1A-220ENST00000635988 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-220ENST00000635988 HSP90AA2PQ14568 343 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-220ENST00000635988 PKNOX2Q96KN3 472 aa18.53■□□□□ 0.56
CACNA1A-220ENST00000635988 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-220ENST00000635988 BMP2KLQ5H9B9 411 aa18.52■□□□□ 0.56
CACNA1A-220ENST00000635988 CHMP4BQ9H444 224 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-220ENST00000635988 TMEM57Q8N5G2 664 aa18.52■□□□□ 0.55
CACNA1A-220ENST00000635988 PLEKHF1Q96S99 279 aa18.52■□□□□ 0.55
CACNA1A-220ENST00000635988 ABCA9Q8IUA7 1624 aa18.51■□□□□ 0.55
CACNA1A-220ENST00000635988 PPRC1Q5VV67 1664 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-220ENST00000635988 ALDH1L2Q3SY69 923 aa18.51■□□□□ 0.55
CACNA1A-220ENST00000635988 CHD1LQ86WJ1 897 aa18.51■□□□□ 0.55
CACNA1A-220ENST00000635988 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
CACNA1A-220ENST00000635988 CD109Q6YHK3 1445 aa18.5■□□□□ 0.55
CACNA1A-220ENST00000635988 PPLO60437 1756 aa18.49■□□□□ 0.55
CACNA1A-220ENST00000635988 CHGAP10645 457 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-220ENST00000635988 ZNF428Q96B54 188 aa18.49■□□□□ 0.55
CACNA1A-220ENST00000635988 GOLGA6L22H0YM25 854 aa18.48■□□□□ 0.55
CACNA1A-220ENST00000635988 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-220ENST00000635988 GCC1Q96CN9 775 aa18.48■□□□□ 0.55
CACNA1A-220ENST00000635988 U2SURPO15042 1029 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-220ENST00000635988 LNPKQ9C0E8 428 aa18.47■□□□□ 0.55
CACNA1A-220ENST00000635988 TPM2P07951 284 aa18.47■□□□□ 0.55
CACNA1A-220ENST00000635988 K7ELQ4 463 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-220ENST00000635988 BRPF1P55201 1214 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-220ENST00000635988 CCDC173Q0VFZ6 552 aa18.46■□□□□ 0.55
CACNA1A-220ENST00000635988 CFAP74Q9C0B2 1584 aa18.46■□□□□ 0.55
CACNA1A-220ENST00000635988 TMEM132EQ6IEE7 984 aa18.46■□□□□ 0.55
CACNA1A-220ENST00000635988 CLEC17AQ6ZS10 378 aa18.46■□□□□ 0.55
CACNA1A-220ENST00000635988 IBTKQ9P2D0 1353 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-220ENST00000635988 GAS2L3Q86XJ1 694 aa18.45■□□□□ 0.54
CACNA1A-220ENST00000635988 ERBB4Q15303 1308 aa18.45■□□□□ 0.54
CACNA1A-220ENST00000635988 TULP4Q9NRJ4 1543 aa18.45■□□□□ 0.54
CACNA1A-220ENST00000635988 ANP32BQ92688 251 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-220ENST00000635988 COL3A1P02461 1466 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-220ENST00000635988 RIPK4P57078 832 aa18.44■□□□□ 0.54
CACNA1A-220ENST00000635988 KIF2CQ99661 725 aa18.44■□□□□ 0.54
CACNA1A-220ENST00000635988 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
CACNA1A-220ENST00000635988 REREQ9P2R6 1566 aa18.44■□□□□ 0.54
CACNA1A-220ENST00000635988 MED14O60244 1454 aa18.43■□□□□ 0.54
CACNA1A-220ENST00000635988 GLI2P10070 1586 aa18.43■□□□□ 0.54
CACNA1A-220ENST00000635988 PPP1R9BQ96SB3 815 aa18.43■□□□□ 0.54
CACNA1A-220ENST00000635988 KLHL40Q2TBA0 621 aa18.41■□□□□ 0.54
CACNA1A-220ENST00000635988 ANKRD45Q5TZF3 282 aa18.41■□□□□ 0.54
CACNA1A-220ENST00000635988 ARHGAP45Q92619 1136 aa18.41■□□□□ 0.54
CACNA1A-220ENST00000635988 NPATQ14207 1427 aa18.4■□□□□ 0.54
CACNA1A-220ENST00000635988 ARHGEF28Q8N1W1 1705 aaKnown RBP18.4■□□□□ 0.54
CACNA1A-220ENST00000635988 VGFO15240 615 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-220ENST00000635988 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
CACNA1A-220ENST00000635988 NASPP49321 788 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-220ENST00000635988 TBC1D9Q6ZT07 1266 aa18.39■□□□□ 0.53
CACNA1A-220ENST00000635988 PPIP5K1Q6PFW1 1433 aa18.39■□□□□ 0.53
CACNA1A-220ENST00000635988 KIDINS220Q9ULH0 1771 aa18.39■□□□□ 0.53
CACNA1A-220ENST00000635988 DIAPH1O60610 1272 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-220ENST00000635988 CABP2Q9NPB3 220 aa18.39■□□□□ 0.53
CACNA1A-220ENST00000635988 ARHGAP31Q2M1Z3 1444 aa18.38■□□□□ 0.53
CACNA1A-220ENST00000635988 PIK3R4Q99570 1358 aa18.38■□□□□ 0.53
CACNA1A-220ENST00000635988 ZBTB7BO15156 539 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-220ENST00000635988 ZSCAN30Q86W11 494 aa18.38■□□□□ 0.53
CACNA1A-220ENST00000635988 TERF2IPQ9NYB0 399 aa18.38■□□□□ 0.53
CACNA1A-220ENST00000635988 CDC45O75419 566 aa18.37■□□□□ 0.53
CACNA1A-220ENST00000635988 FCHSD2O94868 740 aa18.37■□□□□ 0.53
CACNA1A-220ENST00000635988 CALD1Q05682 793 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-220ENST00000635988 GGNBP2Q9H3C7 697 aa18.37■□□□□ 0.53
CACNA1A-220ENST00000635988 DDX49Q9Y6V7 483 aaKnown RBP18.37■□□□□ 0.53
CACNA1A-220ENST00000635988 ATAD2Q6PL18 1390 aa18.36■□□□□ 0.53
CACNA1A-220ENST00000635988 CD2BP2O95400 341 aaKnown RBP18.36■□□□□ 0.53
CACNA1A-220ENST00000635988 PNPLA6Q8IY17 1366 aa18.36■□□□□ 0.53
CACNA1A-220ENST00000635988 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
CACNA1A-220ENST00000635988 SSFA2P28290 1259 aa18.35■□□□□ 0.53
CACNA1A-220ENST00000635988 NUCB2P80303 420 aa18.35■□□□□ 0.53
CACNA1A-220ENST00000635988 VSIG10Q8N0Z9 540 aa18.35■□□□□ 0.53
CACNA1A-220ENST00000635988 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
CACNA1A-220ENST00000635988 BAG4O95429 457 aaKnown RBP18.35■□□□□ 0.53
CACNA1A-220ENST00000635988 TERF1P54274 439 aa18.34■□□□□ 0.53
CACNA1A-220ENST00000635988 RABEP1Q15276 862 aa18.34■□□□□ 0.53
CACNA1A-220ENST00000635988 HS1BP3Q53T59 392 aa18.34■□□□□ 0.53
CACNA1A-220ENST00000635988 GAS2L2Q8NHY3 880 aa18.34■□□□□ 0.53
CACNA1A-220ENST00000635988 ZFYVE9O95405 1425 aa18.34■□□□□ 0.53
CACNA1A-220ENST00000635988 ZNF445P59923 1031 aa18.34■□□□□ 0.53
CACNA1A-220ENST00000635988 FYB1O15117 783 aa18.33■□□□□ 0.53
CACNA1A-220ENST00000635988 MSNP26038 577 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-220ENST00000635988 SRPK2P78362 688 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-220ENST00000635988 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms