RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 DPH6Q7L8W6 267 aa10.8□□□□□ -0.68
SMARCA2-243ENST00000635590 DEPDC4Q8N2C3 294 aa10.8□□□□□ -0.68
SMARCA2-243ENST00000635590 SKIP12755 728 aa10.79□□□□□ -0.68
SMARCA2-243ENST00000635590 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
SMARCA2-243ENST00000635590 TMEM134Q9H6X4 195 aa10.79□□□□□ -0.68
SMARCA2-243ENST00000635590 NCAPD3P42695 1498 aa10.79□□□□□ -0.68
SMARCA2-243ENST00000635590 ZDHHC16Q969W1 377 aa10.79□□□□□ -0.68
SMARCA2-243ENST00000635590 MKRN1Q9UHC7 482 aaKnown RBP10.79□□□□□ -0.68
SMARCA2-243ENST00000635590 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
SMARCA2-243ENST00000635590 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
SMARCA2-243ENST00000635590 NR1H3Q13133 447 aa10.77□□□□□ -0.69
SMARCA2-243ENST00000635590 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
SMARCA2-243ENST00000635590 KDM4FA0A1W2PPD8 638 aa10.76□□□□□ -0.69
SMARCA2-243ENST00000635590 C3orf80F5H4A9 247 aa10.76□□□□□ -0.69
SMARCA2-243ENST00000635590 RASA1P20936 1047 aa10.76□□□□□ -0.69
SMARCA2-243ENST00000635590 GCGRP47871 477 aa10.76□□□□□ -0.69
SMARCA2-243ENST00000635590 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
SMARCA2-243ENST00000635590 FAM174AQ8TBP5 190 aa10.76□□□□□ -0.69
SMARCA2-243ENST00000635590 BACH2Q9BYV9 841 aa10.76□□□□□ -0.69
SMARCA2-243ENST00000635590 IER5LQ5T953 404 aa10.75□□□□□ -0.69
SMARCA2-243ENST00000635590 NUDT18Q6ZVK8 323 aa10.75□□□□□ -0.69
SMARCA2-243ENST00000635590 C1orf216Q8TAB5 229 aa10.75□□□□□ -0.69
SMARCA2-243ENST00000635590 ADAM33Q9BZ11 813 aa10.75□□□□□ -0.69
SMARCA2-243ENST00000635590 ASB16Q96NS5 453 aa10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 PCDHGA4Q9Y5G9 962 aa10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 H3BRB1 525 aa10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 PLCG2P16885 1265 aa10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 BRD2P25440 801 aaKnown RBP10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 MAPK1P28482 360 aa10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 HDLBPQ00341 1268 aaKnown RBP10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 ANKMY2Q8IV38 441 aa10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 TUT1Q9H6E5 874 aaKnown RBP10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 EGFL7Q9UHF1 273 aa10.74□□□□□ -0.69
SMARCA2-243ENST00000635590 ABL1P00519 1130 aa10.73□□□□□ -0.69
SMARCA2-243ENST00000635590 FBXO45P0C2W1 286 aa10.73□□□□□ -0.69
SMARCA2-243ENST00000635590 SWI5Q1ZZU3 235 aa10.73□□□□□ -0.69
SMARCA2-243ENST00000635590 C9orf131Q5VYM1 1079 aa10.73□□□□□ -0.69
SMARCA2-243ENST00000635590 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
SMARCA2-243ENST00000635590 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
SMARCA2-243ENST00000635590 PER1O15534 1290 aaPredicted RBP10.72□□□□□ -0.69
SMARCA2-243ENST00000635590 ZNF211Q13398 564 aaPredicted RBP10.72□□□□□ -0.69
SMARCA2-243ENST00000635590 PIK3R5Q8WYR1 880 aa10.72□□□□□ -0.69
SMARCA2-243ENST00000635590 ARID4BQ4LE39 1312 aaPredicted RBP10.72□□□□□ -0.69
SMARCA2-243ENST00000635590 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
SMARCA2-243ENST00000635590 TSKSQ9UJT2 592 aa10.72□□□□□ -0.69
SMARCA2-243ENST00000635590 C6orf229H3BNL8 230 aa10.71□□□□□ -0.69
SMARCA2-243ENST00000635590 ANO2Q9NQ90 1003 aa10.71□□□□□ -0.69
SMARCA2-243ENST00000635590 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
SMARCA2-243ENST00000635590 LZTS3O60299 673 aaPredicted RBP10.7□□□□□ -0.7
SMARCA2-243ENST00000635590 ICMTO60725 284 aa10.7□□□□□ -0.7
SMARCA2-243ENST00000635590 NCOA4Q13772 614 aa10.7□□□□□ -0.7
SMARCA2-243ENST00000635590 DNAJC2Q99543 621 aaKnown RBP10.7□□□□□ -0.7
SMARCA2-243ENST00000635590 BCL11AQ9H165 835 aa10.7□□□□□ -0.7
SMARCA2-243ENST00000635590 SCAMP3O14828 347 aaKnown RBP10.7□□□□□ -0.7
SMARCA2-243ENST00000635590 DPYDQ12882 1025 aa10.7□□□□□ -0.7
SMARCA2-243ENST00000635590 MRPL58Q14197 206 aaKnown RBP10.7□□□□□ -0.7
SMARCA2-243ENST00000635590 NOP9Q86U38 636 aaKnown RBP10.69□□□□□ -0.7
SMARCA2-243ENST00000635590 CERS3Q8IU89 383 aa10.69□□□□□ -0.7
SMARCA2-243ENST00000635590 GLYCTKQ8IVS8 523 aa10.69□□□□□ -0.7
SMARCA2-243ENST00000635590 TANGO6Q9C0B7 1094 aa10.69□□□□□ -0.7
SMARCA2-243ENST00000635590 DCTN4Q9UJW0 460 aa10.69□□□□□ -0.7
SMARCA2-243ENST00000635590 ATAD2BQ9ULI0 1458 aa10.69□□□□□ -0.7
SMARCA2-243ENST00000635590 RAD51AP2Q09MP3 1159 aa10.68□□□□□ -0.7
SMARCA2-243ENST00000635590 COL19A1Q14993 1142 aa10.68□□□□□ -0.7
SMARCA2-243ENST00000635590 EAPPQ56P03 285 aaPredicted RBP10.68□□□□□ -0.7
SMARCA2-243ENST00000635590 LNPKQ9C0E8 428 aa10.68□□□□□ -0.7
SMARCA2-243ENST00000635590 ZBBXA8MT70 800 aa10.68□□□□□ -0.7
SMARCA2-243ENST00000635590 BRPF3Q9ULD4 1205 aa10.68□□□□□ -0.7
SMARCA2-243ENST00000635590 ECM1Q16610 540 aa10.67□□□□□ -0.7
SMARCA2-243ENST00000635590 ZSCAN29Q8IWY8 852 aaPredicted RBP10.67□□□□□ -0.7
SMARCA2-243ENST00000635590 PNMA3Q9UL41 463 aa10.67□□□□□ -0.7
SMARCA2-243ENST00000635590 COL9A1P20849 921 aa10.66□□□□□ -0.7
SMARCA2-243ENST00000635590 LDLRAD1Q5T700 205 aa10.66□□□□□ -0.7
SMARCA2-243ENST00000635590 TAS1R3Q7RTX0 852 aa10.66□□□□□ -0.7
SMARCA2-243ENST00000635590 TATDN2Q93075 761 aa10.66□□□□□ -0.7
SMARCA2-243ENST00000635590 NESP48681 1621 aa10.66□□□□□ -0.7
SMARCA2-243ENST00000635590 NBPF26B4DH59 902 aa10.65□□□□□ -0.7
SMARCA2-243ENST00000635590 PRMT3O60678 531 aa10.65□□□□□ -0.7
SMARCA2-243ENST00000635590 HMGXB3Q12766 1538 aa10.65□□□□□ -0.7
SMARCA2-243ENST00000635590 SMARCA2P51531 1590 aa10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 C21orf2O43822 256 aa10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 MARCH6O60337 910 aa10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 KCNH2Q12809 1159 aa10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 NOL8Q76FK4 1167 aaKnown RBP10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 RNF135Q8IUD6 432 aa10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 OGFOD1Q8N543 542 aa10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 SYMPKQ92797 1274 aaKnown RBP10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 ZNF594Q96JF6 807 aaPredicted RBP10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 CUEDC1Q9NWM3 386 aaPredicted RBP10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 TMA7Q9Y2S6 64 aaKnown RBP10.64□□□□□ -0.71
SMARCA2-243ENST00000635590 ATMINO43313 823 aaPredicted RBP10.63□□□□□ -0.71
SMARCA2-243ENST00000635590 OCLNQ16625 522 aa10.63□□□□□ -0.71
SMARCA2-243ENST00000635590 TINF2Q9BSI4 451 aa10.63□□□□□ -0.71
SMARCA2-243ENST00000635590 CXXC1Q9P0U4 656 aaPredicted RBP10.63□□□□□ -0.71
SMARCA2-243ENST00000635590 SLC10A3P09131 477 aa10.63□□□□□ -0.71
SMARCA2-243ENST00000635590 CLDN10P78369 228 aa10.62□□□□□ -0.71
SMARCA2-243ENST00000635590 ARHGAP4P98171 946 aa10.62□□□□□ -0.71
SMARCA2-243ENST00000635590 RGL4Q8IZJ4 473 aa10.62□□□□□ -0.71
SMARCA2-243ENST00000635590 DHX38Q92620 1227 aaKnown RBP10.62□□□□□ -0.71
SMARCA2-243ENST00000635590 METTL16Q86W50 562 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms