RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 AK7Q96M32 723 aa5.69□□□□□ -1.5
PSPC1-208ENST00000635562 NXF1Q9UBU9 619 aaKnown RBP5.69□□□□□ -1.5
PSPC1-208ENST00000635562 MOXD2PA6NHM9 499 aa5.68□□□□□ -1.5
PSPC1-208ENST00000635562 TMEM132AQ24JP5 1023 aa5.68□□□□□ -1.5
PSPC1-208ENST00000635562 PRPF38BQ5VTL8 546 aaKnown RBP5.67□□□□□ -1.5
PSPC1-208ENST00000635562 FAM174AQ8TBP5 190 aa5.67□□□□□ -1.5
PSPC1-208ENST00000635562 TRIM66O15016 1216 aa5.66□□□□□ -1.5
PSPC1-208ENST00000635562 ADH1CP00326 375 aa5.66□□□□□ -1.5
PSPC1-208ENST00000635562 NDUFV2P19404 249 aa5.66□□□□□ -1.5
PSPC1-208ENST00000635562 SCARF1Q14162 830 aa5.66□□□□□ -1.5
PSPC1-208ENST00000635562 RSBN1LQ6PCB5 846 aaPredicted RBP5.66□□□□□ -1.5
PSPC1-208ENST00000635562 BAP1Q92560 729 aa5.66□□□□□ -1.5
PSPC1-208ENST00000635562 BEGAINQ9BUH8 593 aa5.66□□□□□ -1.5
PSPC1-208ENST00000635562 ZBTB3Q9H5J0 574 aa5.66□□□□□ -1.5
PSPC1-208ENST00000635562 BMP1P13497 986 aa5.65□□□□□ -1.5
PSPC1-208ENST00000635562 NNTQ13423 1086 aa5.65□□□□□ -1.5
PSPC1-208ENST00000635562 LYPD8Q6UX82 237 aa5.65□□□□□ -1.5
PSPC1-208ENST00000635562 TRIM46Q7Z4K8 759 aa5.65□□□□□ -1.5
PSPC1-208ENST00000635562 H3BM21 787 aa5.64□□□□□ -1.51
PSPC1-208ENST00000635562 SPTLC1O15269 473 aa5.64□□□□□ -1.51
PSPC1-208ENST00000635562 CTHP32929 405 aa5.64□□□□□ -1.51
PSPC1-208ENST00000635562 NEUROD2Q15784 382 aa5.64□□□□□ -1.51
PSPC1-208ENST00000635562 LINC01559Q495D7 138 aa5.64□□□□□ -1.51
PSPC1-208ENST00000635562 ARMC2Q8NEN0 867 aa5.64□□□□□ -1.51
PSPC1-208ENST00000635562 TBC1D2Q9BYX2 928 aa5.64□□□□□ -1.51
PSPC1-208ENST00000635562 TLL2Q9Y6L7 1015 aa5.64□□□□□ -1.51
PSPC1-208ENST00000635562 PDE4DQ08499 809 aa5.63□□□□□ -1.51
PSPC1-208ENST00000635562 NR5A1Q13285 461 aa5.63□□□□□ -1.51
PSPC1-208ENST00000635562 MRPL14Q6P1L8 145 aaKnown RBP5.63□□□□□ -1.51
PSPC1-208ENST00000635562 CDK15Q96Q40 435 aa5.63□□□□□ -1.51
PSPC1-208ENST00000635562 TUSC1Q2TAM9 212 aa5.62□□□□□ -1.51
PSPC1-208ENST00000635562 BPHLQ86WA6 291 aaPredicted RBP5.62□□□□□ -1.51
PSPC1-208ENST00000635562 PARP9Q8IXQ6 854 aa5.62□□□□□ -1.51
PSPC1-208ENST00000635562 ZFP42Q96MM3 310 aa5.62□□□□□ -1.51
PSPC1-208ENST00000635562 UPP2O95045 317 aa5.61□□□□□ -1.51
PSPC1-208ENST00000635562 F12P00748 615 aaPredicted RBP5.61□□□□□ -1.51
PSPC1-208ENST00000635562 TIMP2P16035 220 aa5.61□□□□□ -1.51
PSPC1-208ENST00000635562 HRCP23327 699 aa5.61□□□□□ -1.51
PSPC1-208ENST00000635562 WDR4P57081 412 aaKnown RBP5.61□□□□□ -1.51
PSPC1-208ENST00000635562 NBPF14Q5TI25 921 aa5.61□□□□□ -1.51
PSPC1-208ENST00000635562 RIC3Q7Z5B4 369 aa5.61□□□□□ -1.51
PSPC1-208ENST00000635562 ZSCAN1Q8NBB4 408 aa5.61□□□□□ -1.51
PSPC1-208ENST00000635562 CFAP99D6REC4 459 aa5.6□□□□□ -1.51
PSPC1-208ENST00000635562 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
PSPC1-208ENST00000635562 GPBP1L1Q9HC44 474 aaPredicted RBP5.6□□□□□ -1.51
PSPC1-208ENST00000635562 VSIG8P0DPA2 414 aa5.59□□□□□ -1.51
PSPC1-208ENST00000635562 GMPRP36959 345 aa5.59□□□□□ -1.51
PSPC1-208ENST00000635562 AGERQ15109 404 aa5.59□□□□□ -1.51
PSPC1-208ENST00000635562 HELBQ8NG08 1087 aaPredicted RBP5.59□□□□□ -1.51
PSPC1-208ENST00000635562 GPKOWQ92917 476 aaPredicted RBP eCLIP5.59□□□□□ -1.51
PSPC1-208ENST00000635562 KDM4CQ9H3R0 1056 aa5.59□□□□□ -1.51
PSPC1-208ENST00000635562 ZIC2O95409 532 aaPredicted RBP5.58□□□□□ -1.52
PSPC1-208ENST00000635562 PURBQ96QR8 312 aaKnown RBP5.58□□□□□ -1.52
PSPC1-208ENST00000635562 KLF16Q9BXK1 252 aaPredicted RBP5.58□□□□□ -1.52
PSPC1-208ENST00000635562 MAP10Q9P2G4 905 aa5.58□□□□□ -1.52
PSPC1-208ENST00000635562 MAP4K5Q9Y4K4 846 aa5.58□□□□□ -1.52
PSPC1-208ENST00000635562 PCDHB15Q9Y5E8 787 aa5.58□□□□□ -1.52
PSPC1-208ENST00000635562 NUTM2BA6NNL0 878 aaPredicted RBP5.57□□□□□ -1.52
PSPC1-208ENST00000635562 NUTM2EB1AL46 878 aaPredicted RBP5.57□□□□□ -1.52
PSPC1-208ENST00000635562 ARID5BQ14865 1188 aa5.57□□□□□ -1.52
PSPC1-208ENST00000635562 NUTM2DQ5VT03 806 aaPredicted RBP5.57□□□□□ -1.52
PSPC1-208ENST00000635562 NUTM2AQ8IVF1 878 aaPredicted RBP5.57□□□□□ -1.52
PSPC1-208ENST00000635562 TRMT44Q8IYL2 757 aaKnown RBP5.57□□□□□ -1.52
PSPC1-208ENST00000635562 FOXJ1Q92949 421 aa5.57□□□□□ -1.52
PSPC1-208ENST00000635562 RSPH6AQ9H0K4 717 aa5.57□□□□□ -1.52
PSPC1-208ENST00000635562 GTF3C3Q9Y5Q9 886 aa5.57□□□□□ -1.52
PSPC1-208ENST00000635562 MAN1A2O60476 641 aa5.56□□□□□ -1.52
PSPC1-208ENST00000635562 C1QTNF2Q9BXJ5 285 aa5.56□□□□□ -1.52
PSPC1-208ENST00000635562 LILRB3O75022 631 aa5.55□□□□□ -1.52
PSPC1-208ENST00000635562 MYSM1Q5VVJ2 828 aa5.55□□□□□ -1.52
PSPC1-208ENST00000635562 MEIOBQ8N635 442 aa5.55□□□□□ -1.52
PSPC1-208ENST00000635562 TSC1Q92574 1164 aa5.55□□□□□ -1.52
PSPC1-208ENST00000635562 TSEN34Q9BSV6 310 aaKnown RBP5.55□□□□□ -1.52
PSPC1-208ENST00000635562 CDV3Q9UKY7 258 aaKnown RBP5.55□□□□□ -1.52
PSPC1-208ENST00000635562 EMILIN1Q9Y6C2 1016 aa5.55□□□□□ -1.52
PSPC1-208ENST00000635562 ERBB4Q15303 1308 aa5.54□□□□□ -1.52
PSPC1-208ENST00000635562 BMP2P12643 396 aa5.54□□□□□ -1.52
PSPC1-208ENST00000635562 GRM5P41594 1212 aa5.54□□□□□ -1.52
PSPC1-208ENST00000635562 VEGFBP49765 207 aa5.54□□□□□ -1.52
PSPC1-208ENST00000635562 CSPP1Q1MSJ5 1256 aa5.54□□□□□ -1.52
PSPC1-208ENST00000635562 SH3RF1Q7Z6J0 888 aa5.54□□□□□ -1.52
PSPC1-208ENST00000635562 LINC00528Q8N1L1 170 aa5.54□□□□□ -1.52
PSPC1-208ENST00000635562 CABLES1Q8TDN4 633 aa5.54□□□□□ -1.52
PSPC1-208ENST00000635562 ITPKCQ96DU7 683 aa5.54□□□□□ -1.52
PSPC1-208ENST00000635562 PER1O15534 1290 aaPredicted RBP5.53□□□□□ -1.52
PSPC1-208ENST00000635562 NR3C2P08235 984 aa5.53□□□□□ -1.52
PSPC1-208ENST00000635562 FSHRP23945 695 aa5.53□□□□□ -1.52
PSPC1-208ENST00000635562 CLK2P49760 499 aaKnown RBP5.53□□□□□ -1.52
PSPC1-208ENST00000635562 C4orf48Q5BLP8 95 aa5.53□□□□□ -1.52
PSPC1-208ENST00000635562 VASH1Q7L8A9 365 aaPredicted RBP5.53□□□□□ -1.52
PSPC1-208ENST00000635562 SH3BP5LQ7L8J4 393 aa5.53□□□□□ -1.52
PSPC1-208ENST00000635562 FAM117AQ9C073 453 aa5.53□□□□□ -1.52
PSPC1-208ENST00000635562 ZFAND3Q9H8U3 227 aa5.53□□□□□ -1.52
PSPC1-208ENST00000635562 ZC3H4Q9UPT8 1303 aaKnown RBP5.52□□□□□ -1.53
PSPC1-208ENST00000635562 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
PSPC1-208ENST00000635562 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.52□□□□□ -1.539e-21■□□□□ 9.3
PSPC1-208ENST00000635562 C6orf118Q5T5N4 469 aa5.52□□□□□ -1.53
PSPC1-208ENST00000635562 CCDC116Q8IYX3 515 aa5.52□□□□□ -1.53
PSPC1-208ENST00000635562 PGPEP1Q9NXJ5 209 aa5.52□□□□□ -1.53
PSPC1-208ENST00000635562 LIMD1Q9UGP4 676 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms