RNA–Protein interactions for RNA: ENST00000635556.1

LINC01646-203, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 5

Gene LINC01646, Length 914 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-203ENST00000635556 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
LINC01646-203ENST00000635556 PHF8Q9UPP1 1060 aa13.38□□□□□ -0.27
LINC01646-203ENST00000635556 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
LINC01646-203ENST00000635556 PIK3C2AO00443 1686 aa13.36□□□□□ -0.27
LINC01646-203ENST00000635556 RALBP1Q15311 655 aa13.35□□□□□ -0.27
LINC01646-203ENST00000635556 MIER1Q8N108 512 aa13.35□□□□□ -0.27
LINC01646-203ENST00000635556 NGDNQ8NEJ9 315 aaKnown RBP13.35□□□□□ -0.27
LINC01646-203ENST00000635556 PMFBP1Q8TBY8 1022 aa13.35□□□□□ -0.27
LINC01646-203ENST00000635556 OVOS2A0A0J9YW53 1432 aa13.35□□□□□ -0.27
LINC01646-203ENST00000635556 OVOS2Q6IE36 1432 aa13.35□□□□□ -0.27
LINC01646-203ENST00000635556 NHSL1Q5SYE7 1610 aa13.35□□□□□ -0.27
LINC01646-203ENST00000635556 ESCO1Q5FWF5 840 aa13.34□□□□□ -0.27
LINC01646-203ENST00000635556 TTC21BQ7Z4L5 1316 aa13.34□□□□□ -0.27
LINC01646-203ENST00000635556 TTC21AQ8NDW8 1320 aa13.34□□□□□ -0.27
LINC01646-203ENST00000635556 CC2D1BQ5T0F9 858 aaKnown RBP13.33□□□□□ -0.28
LINC01646-203ENST00000635556 ORAI2Q96SN7 254 aa13.33□□□□□ -0.28
LINC01646-203ENST00000635556 PXDNQ92626 1479 aa13.33□□□□□ -0.28
LINC01646-203ENST00000635556 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
LINC01646-203ENST00000635556 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
LINC01646-203ENST00000635556 MARF1Q9Y4F3 1742 aaKnown RBP13.32□□□□□ -0.28
LINC01646-203ENST00000635556 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
LINC01646-203ENST00000635556 USP31Q70CQ4 1352 aa13.32□□□□□ -0.28
LINC01646-203ENST00000635556 FYB1O15117 783 aa13.31□□□□□ -0.28
LINC01646-203ENST00000635556 BRINP3Q76B58 766 aa13.31□□□□□ -0.28
LINC01646-203ENST00000635556 NPHP3Q7Z494 1330 aa13.31□□□□□ -0.28
LINC01646-203ENST00000635556 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
LINC01646-203ENST00000635556 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
LINC01646-203ENST00000635556 SLAIN2Q9P270 581 aa13.3□□□□□ -0.28
LINC01646-203ENST00000635556 SBNO1A3KN83 1393 aa13.3□□□□□ -0.28
LINC01646-203ENST00000635556 NME9Q86XW9 330 aa13.29□□□□□ -0.28
LINC01646-203ENST00000635556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC01646-203ENST00000635556 MED1Q15648 1581 aaPredicted RBP13.28□□□□□ -0.28
LINC01646-203ENST00000635556 NLRP13Q86W25 1043 aa13.28□□□□□ -0.28
LINC01646-203ENST00000635556 GGNBP2Q9H3C7 697 aa13.28□□□□□ -0.28
LINC01646-203ENST00000635556 TNS3Q68CZ2 1445 aa13.28□□□□□ -0.28
LINC01646-203ENST00000635556 SMG6Q86US8 1419 aaKnown RBP13.28□□□□□ -0.28
LINC01646-203ENST00000635556 FOXO3O43524 673 aa13.27□□□□□ -0.29
LINC01646-203ENST00000635556 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
LINC01646-203ENST00000635556 AATKQ6ZMQ8 1374 aa13.27□□□□□ -0.29
LINC01646-203ENST00000635556 SLIT3O75094 1523 aa13.27□□□□□ -0.29
LINC01646-203ENST00000635556 PPP2R1AP30153 589 aa13.26□□□□□ -0.29
LINC01646-203ENST00000635556 PSME1Q06323 249 aa13.26□□□□□ -0.29
LINC01646-203ENST00000635556 CNGB1Q14028 1251 aaPredicted RBP13.26□□□□□ -0.29
LINC01646-203ENST00000635556 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
LINC01646-203ENST00000635556 CRYBG1Q9Y4K1 1723 aa13.26□□□□□ -0.29
LINC01646-203ENST00000635556 SOS2Q07890 1332 aaPredicted RBP13.25□□□□□ -0.29
LINC01646-203ENST00000635556 COG3Q96JB2 828 aa13.25□□□□□ -0.29
LINC01646-203ENST00000635556 NFAT5O94916 1531 aa13.24□□□□□ -0.29
LINC01646-203ENST00000635556 KRT28Q7Z3Y7 464 aa13.24□□□□□ -0.29
LINC01646-203ENST00000635556 PHRF1Q9P1Y6 1649 aaKnown RBP13.24□□□□□ -0.29
LINC01646-203ENST00000635556 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
LINC01646-203ENST00000635556 ARHGEF10O15013 1369 aa13.23□□□□□ -0.29
LINC01646-203ENST00000635556 USP19O94966 1318 aa13.23□□□□□ -0.29
LINC01646-203ENST00000635556 CERKQ8TCT0 537 aa13.23□□□□□ -0.29
LINC01646-203ENST00000635556 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
LINC01646-203ENST00000635556 COL16A1Q07092 1604 aaPredicted RBP13.22□□□□□ -0.29
LINC01646-203ENST00000635556 TOM1O60784 492 aa13.22□□□□□ -0.29
LINC01646-203ENST00000635556 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
LINC01646-203ENST00000635556 ZRANB1Q9UGI0 708 aa13.22□□□□□ -0.29
LINC01646-203ENST00000635556 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
LINC01646-203ENST00000635556 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.29
LINC01646-203ENST00000635556 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.29
LINC01646-203ENST00000635556 ABTB2Q8N961 1025 aa13.21□□□□□ -0.29
LINC01646-203ENST00000635556 DDX17Q92841 729 aaKnown RBP13.21□□□□□ -0.29
LINC01646-203ENST00000635556 MRS2Q9HD23 443 aa13.21□□□□□ -0.29
LINC01646-203ENST00000635556 SHPRHQ149N8 1683 aa13.21□□□□□ -0.3
LINC01646-203ENST00000635556 PHLPP1O60346 1717 aa13.2□□□□□ -0.3
LINC01646-203ENST00000635556 PEAK1Q9H792 1746 aa13.2□□□□□ -0.3
LINC01646-203ENST00000635556 NLRP6P59044 892 aa13.2□□□□□ -0.3
LINC01646-203ENST00000635556 CCDC184Q52MB2 194 aa13.2□□□□□ -0.3
LINC01646-203ENST00000635556 COL22A1Q8NFW1 1626 aaPredicted RBP13.2□□□□□ -0.3
LINC01646-203ENST00000635556 INSRP06213 1382 aa13.2□□□□□ -0.3
LINC01646-203ENST00000635556 KIF24Q5T7B8 1368 aa13.2□□□□□ -0.3
LINC01646-203ENST00000635556 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
LINC01646-203ENST00000635556 MAP2P11137 1827 aaKnown RBP13.19□□□□□ -0.3
LINC01646-203ENST00000635556 RTL1A6NKG5 1358 aa13.19□□□□□ -0.3
LINC01646-203ENST00000635556 ABCC6O95255 1503 aa13.18□□□□□ -0.3
LINC01646-203ENST00000635556 LTN1O94822 1766 aa13.18□□□□□ -0.3
LINC01646-203ENST00000635556 UBAP1LF5GYI3 381 aa13.18□□□□□ -0.3
LINC01646-203ENST00000635556 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
LINC01646-203ENST00000635556 MTHFSP49914 203 aa13.17□□□□□ -0.3
LINC01646-203ENST00000635556 POLKQ9UBT6 870 aa13.17□□□□□ -0.3
LINC01646-203ENST00000635556 NUTM2GQ5VZR2 741 aa13.16□□□□□ -0.3
LINC01646-203ENST00000635556 KCNH5Q8NCM2 988 aa13.16□□□□□ -0.3
LINC01646-203ENST00000635556 FLT4P35916 1363 aa13.16□□□□□ -0.3
LINC01646-203ENST00000635556 PNISRQ8TF01 805 aaKnown RBP13.15□□□□□ -0.3
LINC01646-203ENST00000635556 CFAP53Q96M91 514 aa13.15□□□□□ -0.3
LINC01646-203ENST00000635556 EMILIN1Q9Y6C2 1016 aa13.15□□□□□ -0.3
LINC01646-203ENST00000635556 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
LINC01646-203ENST00000635556 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
LINC01646-203ENST00000635556 LMOD2Q6P5Q4 547 aa13.14□□□□□ -0.31
LINC01646-203ENST00000635556 CPDO75976 1380 aa13.13□□□□□ -0.31
LINC01646-203ENST00000635556 RGPD1P0DJD0 1748 aa13.13□□□□□ -0.31
LINC01646-203ENST00000635556 BLMP54132 1417 aaPredicted RBP13.13□□□□□ -0.31
LINC01646-203ENST00000635556 GCP02774 474 aa13.12□□□□□ -0.31
LINC01646-203ENST00000635556 FBLN1P23142 703 aa13.12□□□□□ -0.31
LINC01646-203ENST00000635556 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
LINC01646-203ENST00000635556 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
LINC01646-203ENST00000635556 LRRC59Q96AG4 307 aaKnown RBP13.12□□□□□ -0.31
LINC01646-203ENST00000635556 SOX12O15370 315 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms