RNA–Protein interactions for RNA: ENST00000633225.1

SKIDA1-204, Transcript of SKI/DACH domain containing 1, humanhuman

TSL 1 (best)

Gene SKIDA1, Length 1,452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-204ENST00000633225 SHPRHQ149N8 1683 aa26.69■■□□□ 1.86
SKIDA1-204ENST00000633225 ZNF692Q9BU19 519 aaPredicted RBP26.68■■□□□ 1.86
SKIDA1-204ENST00000633225 TERF2IPQ9NYB0 399 aa26.68■■□□□ 1.86
SKIDA1-204ENST00000633225 HDGFL2Q7Z4V5 671 aaPredicted RBP26.68■■□□□ 1.86
SKIDA1-204ENST00000633225 LRRC59Q96AG4 307 aaKnown RBP26.68■■□□□ 1.86
SKIDA1-204ENST00000633225 PNPLA6Q8IY17 1366 aa26.68■■□□□ 1.86
SKIDA1-204ENST00000633225 PIK3C2AO00443 1686 aa26.67■■□□□ 1.86
SKIDA1-204ENST00000633225 EDC4Q6P2E9 1401 aaKnown RBP26.67■■□□□ 1.86
SKIDA1-204ENST00000633225 COL22A1Q8NFW1 1626 aaPredicted RBP26.65■■□□□ 1.86
SKIDA1-204ENST00000633225 BRD4O60885 1362 aaPredicted RBP26.65■■□□□ 1.86
SKIDA1-204ENST00000633225 JCADQ9P266 1359 aa26.64■■□□□ 1.86
SKIDA1-204ENST00000633225 TTC21BQ7Z4L5 1316 aa26.64■■□□□ 1.86
SKIDA1-204ENST00000633225 CARD14Q9BXL6 1004 aa26.64■■□□□ 1.86
SKIDA1-204ENST00000633225 PAK3O75914 559 aaPredicted RBP26.63■■□□□ 1.85
SKIDA1-204ENST00000633225 PANK3Q9H999 370 aa26.62■■□□□ 1.85
SKIDA1-204ENST00000633225 MARF1Q9Y4F3 1742 aaKnown RBP26.62■■□□□ 1.85
SKIDA1-204ENST00000633225 CRYBG1Q9Y4K1 1723 aa26.62■■□□□ 1.85
SKIDA1-204ENST00000633225 NSD3Q9BZ95 1437 aa26.61■■□□□ 1.85
SKIDA1-204ENST00000633225 MED1Q15648 1581 aaPredicted RBP26.61■■□□□ 1.85
SKIDA1-204ENST00000633225 ABCA3Q99758 1704 aa26.6■■□□□ 1.85
SKIDA1-204ENST00000633225 ARHGEF10O15013 1369 aa26.6■■□□□ 1.85
SKIDA1-204ENST00000633225 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.59■■□□□ 1.85
SKIDA1-204ENST00000633225 TTC21AQ8NDW8 1320 aa26.58■■□□□ 1.85
SKIDA1-204ENST00000633225 LMOD2Q6P5Q4 547 aa26.58■■□□□ 1.85
SKIDA1-204ENST00000633225 USP54Q70EL1 1684 aa26.58■■□□□ 1.84
SKIDA1-204ENST00000633225 NUTM2GQ5VZR2 741 aa26.57■■□□□ 1.84
SKIDA1-204ENST00000633225 NME9Q86XW9 330 aa26.56■■□□□ 1.84
SKIDA1-204ENST00000633225 ABTB2Q8N961 1025 aa26.56■■□□□ 1.84
SKIDA1-204ENST00000633225 KIF20BQ96Q89 1820 aa26.55■■□□□ 1.84
SKIDA1-204ENST00000633225 PHRF1Q9P1Y6 1649 aaKnown RBP26.55■■□□□ 1.84
SKIDA1-204ENST00000633225 ZNF316A6NFI3 1004 aaPredicted RBP26.55■■□□□ 1.84
SKIDA1-204ENST00000633225 ZRANB1Q9UGI0 708 aa26.55■■□□□ 1.84
SKIDA1-204ENST00000633225 LRP6O75581 1613 aa26.55■■□□□ 1.84
SKIDA1-204ENST00000633225 USP31Q70CQ4 1352 aa26.52■■□□□ 1.84
SKIDA1-204ENST00000633225 OVOS2A0A0J9YW53 1432 aa26.52■■□□□ 1.84
SKIDA1-204ENST00000633225 OVOS2Q6IE36 1432 aa26.52■■□□□ 1.84
SKIDA1-204ENST00000633225 CABLES1Q8TDN4 633 aa26.52■■□□□ 1.84
SKIDA1-204ENST00000633225 USP19O94966 1318 aa26.52■■□□□ 1.84
SKIDA1-204ENST00000633225 SPATA31A6Q5VVP1 1343 aa26.51■■□□□ 1.83
SKIDA1-204ENST00000633225 SLIT3O75094 1523 aa26.51■■□□□ 1.83
SKIDA1-204ENST00000633225 PER1O15534 1290 aaPredicted RBP26.5■■□□□ 1.83
SKIDA1-204ENST00000633225 PLEKHG5O94827 1062 aa26.5■■□□□ 1.83
SKIDA1-204ENST00000633225 FYB1O15117 783 aa26.49■■□□□ 1.83
SKIDA1-204ENST00000633225 NLRP6P59044 892 aa26.49■■□□□ 1.83
SKIDA1-204ENST00000633225 NLRP13Q86W25 1043 aa26.47■■□□□ 1.83
SKIDA1-204ENST00000633225 GGNBP2Q9H3C7 697 aa26.46■■□□□ 1.83
SKIDA1-204ENST00000633225 CGNL1Q0VF96 1302 aa26.46■■□□□ 1.83
SKIDA1-204ENST00000633225 ANKRD26Q9UPS8 1709 aa26.46■■□□□ 1.83
SKIDA1-204ENST00000633225 NUTM2BA6NNL0 878 aaPredicted RBP26.45■■□□□ 1.82
SKIDA1-204ENST00000633225 NUTM2EB1AL46 878 aaPredicted RBP26.45■■□□□ 1.82
SKIDA1-204ENST00000633225 NUTM2AQ8IVF1 878 aaPredicted RBP26.45■■□□□ 1.82
SKIDA1-204ENST00000633225 NFAT5O94916 1531 aa26.44■■□□□ 1.82
SKIDA1-204ENST00000633225 DDX10Q13206 875 aaKnown RBP26.44■■□□□ 1.82
SKIDA1-204ENST00000633225 AMER1Q5JTC6 1135 aaPredicted RBP26.43■■□□□ 1.82
SKIDA1-204ENST00000633225 KNSTRNQ9Y448 316 aa26.43■■□□□ 1.82
SKIDA1-204ENST00000633225 GCP02774 474 aa26.4■■□□□ 1.82
SKIDA1-204ENST00000633225 COG3Q96JB2 828 aa26.4■■□□□ 1.82
SKIDA1-204ENST00000633225 NSD2O96028 1365 aa26.39■■□□□ 1.82
SKIDA1-204ENST00000633225 ADAMTS2O95450 1211 aa26.38■■□□□ 1.81
SKIDA1-204ENST00000633225 SOX12O15370 315 aa26.36■■□□□ 1.81
SKIDA1-204ENST00000633225 HAP1P54257 671 aaPredicted RBP26.36■■□□□ 1.81
SKIDA1-204ENST00000633225 NPC1L1Q9UHC9 1359 aa26.36■■□□□ 1.81
SKIDA1-204ENST00000633225 KIAA0232Q92628 1395 aa26.35■■□□□ 1.81
SKIDA1-204ENST00000633225 CPDO75976 1380 aa26.35■■□□□ 1.81
SKIDA1-204ENST00000633225 FBLN1P23142 703 aa26.34■■□□□ 1.81
SKIDA1-204ENST00000633225 ZC3H6P61129 1189 aaKnown RBP26.34■■□□□ 1.81
SKIDA1-204ENST00000633225 LTN1O94822 1766 aa26.33■■□□□ 1.81
SKIDA1-204ENST00000633225 KCNH5Q8NCM2 988 aa26.33■■□□□ 1.81
SKIDA1-204ENST00000633225 PLCH1Q4KWH8 1693 aa26.33■■□□□ 1.8
SKIDA1-204ENST00000633225 CC2D1BQ5T0F9 858 aaKnown RBP26.32■■□□□ 1.8
SKIDA1-204ENST00000633225 COL14A1Q05707 1796 aaKnown RBP26.31■■□□□ 1.8
SKIDA1-204ENST00000633225 LMO7Q8WWI1 1683 aa26.31■■□□□ 1.8
SKIDA1-204ENST00000633225 COL18A1P39060 1754 aa26.31■■□□□ 1.8
SKIDA1-204ENST00000633225 FAM83GA6ND36 823 aa26.3■■□□□ 1.8
SKIDA1-204ENST00000633225 ARHGEF25Q86VW2 580 aa26.3■■□□□ 1.8
SKIDA1-204ENST00000633225 C8orf37Q96NL8 207 aa26.3■■□□□ 1.8
SKIDA1-204ENST00000633225 CHRNA2Q15822 529 aa26.29■■□□□ 1.8
SKIDA1-204ENST00000633225 MEX3CQ5U5Q3 659 aaKnown RBP26.29■■□□□ 1.8
SKIDA1-204ENST00000633225 PRDM11Q9NQV5 511 aa26.29■■□□□ 1.8
SKIDA1-204ENST00000633225 SLIT2O94813 1529 aa26.28■■□□□ 1.8
SKIDA1-204ENST00000633225 CNGB1Q14028 1251 aaPredicted RBP26.28■■□□□ 1.8
SKIDA1-204ENST00000633225 PEAK1Q9H792 1746 aa26.27■■□□□ 1.8
SKIDA1-204ENST00000633225 AATKQ6ZMQ8 1374 aa26.27■■□□□ 1.8
SKIDA1-204ENST00000633225 NRAPQ86VF7 1730 aa26.27■■□□□ 1.8
SKIDA1-204ENST00000633225 RRS1Q15050 365 aaKnown RBP26.26■■□□□ 1.79
SKIDA1-204ENST00000633225 MORC1Q86VD1 984 aa26.26■■□□□ 1.79
SKIDA1-204ENST00000633225 MAP3K19Q56UN5 1328 aa26.26■■□□□ 1.79
SKIDA1-204ENST00000633225 NWD2Q9ULI1 1742 aa26.25■■□□□ 1.79
SKIDA1-204ENST00000633225 TNNT2P45379 298 aaPredicted RBP26.25■■□□□ 1.79
SKIDA1-204ENST00000633225 MAP2P11137 1827 aaKnown RBP26.25■■□□□ 1.79
SKIDA1-204ENST00000633225 ABCC6O95255 1503 aa26.25■■□□□ 1.79
SKIDA1-204ENST00000633225 CAMTA1Q9Y6Y1 1673 aa26.25■■□□□ 1.79
SKIDA1-204ENST00000633225 RGPD5Q99666 1765 aa26.24■■□□□ 1.79
SKIDA1-204ENST00000633225 ZBTB7CA1YPR0 619 aa26.23■■□□□ 1.79
SKIDA1-204ENST00000633225 FNBP4Q8N3X1 1017 aaPredicted RBP26.23■■□□□ 1.79
SKIDA1-204ENST00000633225 BCL9LQ86UU0 1499 aa26.23■■□□□ 1.79
SKIDA1-204ENST00000633225 AFF2P51816 1311 aa26.23■■□□□ 1.79
SKIDA1-204ENST00000633225 NGLY1Q96IV0 654 aa26.23■■□□□ 1.79
SKIDA1-204ENST00000633225 AXIN2Q9Y2T1 843 aa26.22■■□□□ 1.79
SKIDA1-204ENST00000633225 EMILIN1Q9Y6C2 1016 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms