RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 YTHDC2Q9H6S0 1430 aaKnown RBP10.43□□□□□ -0.74
GPC3-204ENST00000631057 CANXP27824 592 aaKnown RBP10.43□□□□□ -0.74
GPC3-204ENST00000631057 AAMPQ13685 434 aa10.43□□□□□ -0.74
GPC3-204ENST00000631057 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
GPC3-204ENST00000631057 ALKQ9UM73 1620 aa10.42□□□□□ -0.74
GPC3-204ENST00000631057 AGLP35573 1532 aa10.42□□□□□ -0.74
GPC3-204ENST00000631057 A0A1W2PP64 1363 aa10.42□□□□□ -0.74
GPC3-204ENST00000631057 FAM161AQ3B820 660 aa10.42□□□□□ -0.74
GPC3-204ENST00000631057 RTL5Q5HYW3 569 aaPredicted RBP10.42□□□□□ -0.74
GPC3-204ENST00000631057 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
GPC3-204ENST00000631057 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
GPC3-204ENST00000631057 TERF2IPQ9NYB0 399 aa10.41□□□□□ -0.74
GPC3-204ENST00000631057 DLC1Q96QB1 1528 aa10.4□□□□□ -0.74
GPC3-204ENST00000631057 NEUROD2Q15784 382 aa10.4□□□□□ -0.74
GPC3-204ENST00000631057 SKAP1Q86WV1 359 aa10.4□□□□□ -0.74
GPC3-204ENST00000631057 PROM2Q8N271 834 aa10.4□□□□□ -0.74
GPC3-204ENST00000631057 SPRYD3Q8NCJ5 442 aa10.4□□□□□ -0.74
GPC3-204ENST00000631057 MYH16Q9H6N6 1097 aa10.4□□□□□ -0.74
GPC3-204ENST00000631057 STK26Q9P289 416 aa10.4□□□□□ -0.74
GPC3-204ENST00000631057 COL3A1P02461 1466 aaPredicted RBP10.4□□□□□ -0.74
GPC3-204ENST00000631057 U2AF1L5P0DN76 240 aaPredicted RBP10.39□□□□□ -0.75
GPC3-204ENST00000631057 RARSP54136 660 aaKnown RBP10.39□□□□□ -0.75
GPC3-204ENST00000631057 U2AF1Q01081 240 aaKnown RBP eCLIP10.39□□□□□ -0.754e-9■□□□□ 8.2
GPC3-204ENST00000631057 SAFB2Q14151 953 aaKnown RBP eCLIP10.39□□□□□ -0.75
GPC3-204ENST00000631057 CLUAP1Q96AJ1 413 aa10.39□□□□□ -0.75
GPC3-204ENST00000631057 POGKQ9P215 609 aa10.39□□□□□ -0.75
GPC3-204ENST00000631057 RRP7AQ9Y3A4 280 aaKnown RBP10.39□□□□□ -0.75
GPC3-204ENST00000631057 SETD1AO15047 1707 aaKnown RBP10.39□□□□□ -0.75
GPC3-204ENST00000631057 CT47B1P0C2W7 299 aaPredicted RBP10.39□□□□□ -0.75
GPC3-204ENST00000631057 PRAM1Q96QH2 718 aa10.39□□□□□ -0.75
GPC3-204ENST00000631057 MAPK8IP3Q9UPT6 1336 aa10.38□□□□□ -0.75
GPC3-204ENST00000631057 SPATA31D1Q6ZQQ2 1576 aa10.38□□□□□ -0.75
GPC3-204ENST00000631057 PPM1GO15355 546 aaPredicted RBP10.38□□□□□ -0.75
GPC3-204ENST00000631057 DEKP35659 375 aaKnown RBP10.38□□□□□ -0.75
GPC3-204ENST00000631057 C8orf34Q49A92 452 aa10.38□□□□□ -0.75
GPC3-204ENST00000631057 HDGFL2Q7Z4V5 671 aaPredicted RBP10.38□□□□□ -0.75
GPC3-204ENST00000631057 NLRP1Q9C000 1473 aa10.38□□□□□ -0.75
GPC3-204ENST00000631057 CD163L1Q9NR16 1453 aa10.38□□□□□ -0.75
GPC3-204ENST00000631057 MINK1Q8N4C8 1332 aaPredicted RBP10.38□□□□□ -0.75
GPC3-204ENST00000631057 ARHGEF40Q8TER5 1519 aa10.38□□□□□ -0.75
GPC3-204ENST00000631057 RGS3P49796 1198 aa10.37□□□□□ -0.75
GPC3-204ENST00000631057 PMFBP1Q8TBY8 1022 aa10.37□□□□□ -0.75
GPC3-204ENST00000631057 PANK1Q8TE04 598 aa10.37□□□□□ -0.75
GPC3-204ENST00000631057 STAG3Q9UJ98 1225 aa10.37□□□□□ -0.75
GPC3-204ENST00000631057 CDC42BPGQ6DT37 1551 aa10.37□□□□□ -0.75
GPC3-204ENST00000631057 MAP2P11137 1827 aaKnown RBP10.37□□□□□ -0.75
GPC3-204ENST00000631057 TMEM132AQ24JP5 1023 aa10.36□□□□□ -0.75
GPC3-204ENST00000631057 FRAT1Q92837 279 aaPredicted RBP10.36□□□□□ -0.75
GPC3-204ENST00000631057 PNNQ9H307 717 aaKnown RBP10.36□□□□□ -0.75
GPC3-204ENST00000631057 USP35Q9P2H5 1018 aa10.36□□□□□ -0.75
GPC3-204ENST00000631057 COG6Q9Y2V7 657 aa10.36□□□□□ -0.75
GPC3-204ENST00000631057 A2ML1A8K2U0 1454 aa10.36□□□□□ -0.75
GPC3-204ENST00000631057 ATP7BP35670 1465 aa10.36□□□□□ -0.75
GPC3-204ENST00000631057 GGNBP2Q9H3C7 697 aa10.35□□□□□ -0.75
GPC3-204ENST00000631057 IL16Q14005 1332 aa10.35□□□□□ -0.75
GPC3-204ENST00000631057 ZMYM3Q14202 1370 aa10.35□□□□□ -0.75
GPC3-204ENST00000631057 FYB1O15117 783 aa10.35□□□□□ -0.75
GPC3-204ENST00000631057 IGHDP01880 384 aa10.35□□□□□ -0.75
GPC3-204ENST00000631057 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
GPC3-204ENST00000631057 CDK19Q9BWU1 502 aa10.35□□□□□ -0.75
GPC3-204ENST00000631057 KNDC1Q76NI1 1749 aa10.35□□□□□ -0.75
GPC3-204ENST00000631057 RIMS2Q9UQ26 1411 aa10.34□□□□□ -0.75
GPC3-204ENST00000631057 U2SURPO15042 1029 aaKnown RBP10.34□□□□□ -0.75
GPC3-204ENST00000631057 PLEKHF1Q96S99 279 aa10.34□□□□□ -0.75
GPC3-204ENST00000631057 PNPLA6Q8IY17 1366 aa10.34□□□□□ -0.75
GPC3-204ENST00000631057 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
GPC3-204ENST00000631057 TMPOP42166 694 aaKnown RBP10.33□□□□□ -0.76
GPC3-204ENST00000631057 BCL11AQ9H165 835 aa10.33□□□□□ -0.76
GPC3-204ENST00000631057 LAS1LQ9Y4W2 734 aaKnown RBP10.33□□□□□ -0.76
GPC3-204ENST00000631057 DIAPH1O60610 1272 aaKnown RBP10.32□□□□□ -0.76
GPC3-204ENST00000631057 RLBP1P12271 317 aa10.32□□□□□ -0.76
GPC3-204ENST00000631057 ITSN1Q15811 1721 aa10.32□□□□□ -0.76
GPC3-204ENST00000631057 ZKSCAN2Q63HK3 967 aa10.32□□□□□ -0.76
GPC3-204ENST00000631057 NRXN3Q9Y4C0 1643 aa10.32□□□□□ -0.76
GPC3-204ENST00000631057 NEFMP07197 916 aa10.31□□□□□ -0.76
GPC3-204ENST00000631057 RWDD1Q9H446 243 aaPredicted RBP10.31□□□□□ -0.76
GPC3-204ENST00000631057 AKAP12Q02952 1782 aa10.31□□□□□ -0.76
GPC3-204ENST00000631057 MON2Q7Z3U7 1717 aa10.31□□□□□ -0.76
GPC3-204ENST00000631057 LRRC7Q96NW7 1537 aa10.31□□□□□ -0.76
GPC3-204ENST00000631057 MVPQ14764 893 aaKnown RBP10.31□□□□□ -0.76
GPC3-204ENST00000631057 FTSJ3Q8IY81 847 aaKnown RBP10.31□□□□□ -0.76
GPC3-204ENST00000631057 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.31□□□□□ -0.76
GPC3-204ENST00000631057 BCL2L13Q9BXK5 485 aa10.31□□□□□ -0.76
GPC3-204ENST00000631057 CABP1Q9NZU7 370 aa10.31□□□□□ -0.76
GPC3-204ENST00000631057 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
GPC3-204ENST00000631057 FCHSD2O94868 740 aa10.3□□□□□ -0.76
GPC3-204ENST00000631057 EXOSC9Q06265 439 aaKnown RBP10.3□□□□□ -0.76
GPC3-204ENST00000631057 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
GPC3-204ENST00000631057 DZIP1LQ8IYY4 767 aaKnown RBP10.3□□□□□ -0.76
GPC3-204ENST00000631057 ESF1Q9H501 851 aaKnown RBP10.3□□□□□ -0.76
GPC3-204ENST00000631057 SMC4Q9NTJ3 1288 aa10.3□□□□□ -0.76
GPC3-204ENST00000631057 PCDHB15Q9Y5E8 787 aa10.3□□□□□ -0.76
GPC3-204ENST00000631057 EDC4Q6P2E9 1401 aaKnown RBP10.29□□□□□ -0.76
GPC3-204ENST00000631057 RIPK4P57078 832 aa10.29□□□□□ -0.76
GPC3-204ENST00000631057 TSR2Q969E8 191 aaKnown RBP10.29□□□□□ -0.76
GPC3-204ENST00000631057 FAM135BQ49AJ0 1406 aa10.29□□□□□ -0.76
GPC3-204ENST00000631057 DLG5Q8TDM6 1919 aa10.28□□□□□ -0.76
GPC3-204ENST00000631057 ZNF219Q9P2Y4 722 aaPredicted RBP10.28□□□□□ -0.76
GPC3-204ENST00000631057 TNNQ9UQP3 1299 aa10.28□□□□□ -0.76
GPC3-204ENST00000631057 CDK12Q9NYV4 1490 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms