RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 SOX11P35716 441 aa7.36□□□□□ -1.23
CDRT1-208ENST00000630868 BCL2L12Q9HB09 334 aa7.36□□□□□ -1.23
CDRT1-208ENST00000630868 ERICH3Q5RHP9 1530 aa7.36□□□□□ -1.23
CDRT1-208ENST00000630868 ABCC10Q5T3U5 1492 aa7.36□□□□□ -1.23
CDRT1-208ENST00000630868 GABBR2O75899 941 aa7.35□□□□□ -1.23
CDRT1-208ENST00000630868 SLC10A3P09131 477 aa7.35□□□□□ -1.23
CDRT1-208ENST00000630868 STK32AQ8WU08 396 aa7.35□□□□□ -1.23
CDRT1-208ENST00000630868 DCBLD2Q96PD2 775 aa7.35□□□□□ -1.23
CDRT1-208ENST00000630868 MAPKBP1O60336 1514 aa7.35□□□□□ -1.23
CDRT1-208ENST00000630868 PRG4Q92954 1404 aaPredicted RBP7.35□□□□□ -1.23
CDRT1-208ENST00000630868 ATP9BO43861 1147 aa7.34□□□□□ -1.23
CDRT1-208ENST00000630868 HOXB3P14651 431 aaPredicted RBP7.34□□□□□ -1.23
CDRT1-208ENST00000630868 NR6A1Q15406 480 aa7.34□□□□□ -1.23
CDRT1-208ENST00000630868 LHX6Q9UPM6 363 aa7.34□□□□□ -1.23
CDRT1-208ENST00000630868 TOP2BQ02880 1626 aa7.34□□□□□ -1.24
CDRT1-208ENST00000630868 SEMA3FQ13275 785 aa7.33□□□□□ -1.24
CDRT1-208ENST00000630868 PROX2Q3B8N5 592 aa7.33□□□□□ -1.24
CDRT1-208ENST00000630868 PPP4R3BQ5MIZ7 849 aa7.33□□□□□ -1.24
CDRT1-208ENST00000630868 KANK4Q5T7N3 995 aaPredicted RBP7.33□□□□□ -1.24
CDRT1-208ENST00000630868 TMEM164Q5U3C3 297 aa7.33□□□□□ -1.24
CDRT1-208ENST00000630868 PHLDB3Q6NSJ2 640 aa7.33□□□□□ -1.24
CDRT1-208ENST00000630868 BIVM-ERCC5R4GMW8 1640 aa7.33□□□□□ -1.24
CDRT1-208ENST00000630868 PIK3CDO00329 1044 aa7.32□□□□□ -1.24
CDRT1-208ENST00000630868 PER1O15534 1290 aaPredicted RBP7.32□□□□□ -1.24
CDRT1-208ENST00000630868 PTPREP23469 700 aa7.32□□□□□ -1.24
CDRT1-208ENST00000630868 GPR153Q6NV75 609 aa7.32□□□□□ -1.24
CDRT1-208ENST00000630868 PACS2Q86VP3 889 aa7.32□□□□□ -1.24
CDRT1-208ENST00000630868 TXNDC2Q86VQ3 553 aa7.32□□□□□ -1.24
CDRT1-208ENST00000630868 SLF2Q8IX21 1173 aa7.32□□□□□ -1.24
CDRT1-208ENST00000630868 MYT1LQ9UL68 1186 aa7.32□□□□□ -1.24
CDRT1-208ENST00000630868 DIP2BQ9P265 1576 aa7.32□□□□□ -1.24
CDRT1-208ENST00000630868 C6orf229H3BNL8 230 aa7.31□□□□□ -1.24
CDRT1-208ENST00000630868 FAM69CQ0P6D2 419 aa7.31□□□□□ -1.24
CDRT1-208ENST00000630868 ELOAQ14241 798 aaKnown RBP7.31□□□□□ -1.24
CDRT1-208ENST00000630868 B4GALNT3Q6L9W6 998 aa7.31□□□□□ -1.24
CDRT1-208ENST00000630868 IGSF5Q9NSI5 407 aa7.31□□□□□ -1.24
CDRT1-208ENST00000630868 RBM47A0AV96 593 aaKnown RBP7.3□□□□□ -1.24
CDRT1-208ENST00000630868 SWT1Q5T5J6 900 aaKnown RBP7.3□□□□□ -1.24
CDRT1-208ENST00000630868 DNAJC14Q6Y2X3 702 aaPredicted RBP7.3□□□□□ -1.24
CDRT1-208ENST00000630868 FBXO41Q8TF61 875 aa7.3□□□□□ -1.24
CDRT1-208ENST00000630868 SYMPKQ92797 1274 aaKnown RBP7.3□□□□□ -1.24
CDRT1-208ENST00000630868 SLAIN2Q9P270 581 aa7.3□□□□□ -1.24
CDRT1-208ENST00000630868 RUSC2Q8N2Y8 1516 aa7.3□□□□□ -1.24
CDRT1-208ENST00000630868 ADCY10Q96PN6 1610 aa7.3□□□□□ -1.24
CDRT1-208ENST00000630868 FUT2Q10981 343 aa7.29□□□□□ -1.24
CDRT1-208ENST00000630868 DOK7Q18PE1 504 aa7.29□□□□□ -1.24
CDRT1-208ENST00000630868 KIAA1522Q9P206 1035 aaPredicted RBP7.29□□□□□ -1.24
CDRT1-208ENST00000630868 NOVA2Q9UNW9 492 aaKnown RBP7.29□□□□□ -1.24
CDRT1-208ENST00000630868 USP17L3A6NCW0 530 aa7.28□□□□□ -1.24
CDRT1-208ENST00000630868 USP17L4A6NCW7 530 aa7.28□□□□□ -1.24
CDRT1-208ENST00000630868 EIF4G2P78344 907 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDRT1-208ENST00000630868 NOM1Q5C9Z4 860 aaKnown RBP7.28□□□□□ -1.24
CDRT1-208ENST00000630868 USP17L2Q6R6M4 530 aa7.28□□□□□ -1.24
CDRT1-208ENST00000630868 USP17L1Q7RTZ2 530 aa7.28□□□□□ -1.24
CDRT1-208ENST00000630868 KDM6BO15054 1643 aa7.27□□□□□ -1.25
CDRT1-208ENST00000630868 FBXO45P0C2W1 286 aa7.27□□□□□ -1.25
CDRT1-208ENST00000630868 POTEIP0CG38 1075 aa7.27□□□□□ -1.25
CDRT1-208ENST00000630868 RSPH4AQ5TD94 716 aa7.27□□□□□ -1.25
CDRT1-208ENST00000630868 CCER1Q8TC90 406 aaPredicted RBP7.27□□□□□ -1.25
CDRT1-208ENST00000630868 ZSWIM6Q9HCJ5 1215 aa7.27□□□□□ -1.25
CDRT1-208ENST00000630868 USP35Q9P2H5 1018 aa7.27□□□□□ -1.25
CDRT1-208ENST00000630868 KIAA0586Q9BVV6 1533 aa7.27□□□□□ -1.25
CDRT1-208ENST00000630868 LMTK3Q96Q04 1460 aa7.26□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L5A8MUK1 530 aa7.26□□□□□ -1.25
CDRT1-208ENST00000630868 NR1H3Q13133 447 aa7.26□□□□□ -1.25
CDRT1-208ENST00000630868 FAM174AQ8TBP5 190 aa7.26□□□□□ -1.25
CDRT1-208ENST00000630868 CRTC2Q53ET0 693 aaPredicted RBP7.25□□□□□ -1.25
CDRT1-208ENST00000630868 KCNK17Q96T54 332 aa7.25□□□□□ -1.25
CDRT1-208ENST00000630868 KIAA1468Q9P260 1216 aa7.25□□□□□ -1.25
CDRT1-208ENST00000630868 PSDA5PKW4 1024 aaPredicted RBP7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L15C9J2P7 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L10C9JJH3 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L13C9JLJ4 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L12C9JPN9 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L11C9JVI0 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L21D6R901 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L18D6R9N7 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L22D6RA61 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L17D6RBQ6 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L19D6RCP7 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L20D6RJB6 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 RIMBP2O15034 1052 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 CFHP08603 1231 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 SSFA2P28290 1259 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 USP17L24Q0WX57 530 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 PLEKHM2Q8IWE5 1019 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 DEPDC4Q8N2C3 294 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 NFATC2IPQ8NCF5 419 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 PNMA1Q8ND90 353 aa7.24□□□□□ -1.25
CDRT1-208ENST00000630868 SOWAHDA6NJG2 315 aa7.23□□□□□ -1.25
CDRT1-208ENST00000630868 FAM196BA6NMK8 535 aa7.23□□□□□ -1.25
CDRT1-208ENST00000630868 SKIP12755 728 aa7.23□□□□□ -1.25
CDRT1-208ENST00000630868 SERPINB4P48594 390 aa7.23□□□□□ -1.25
CDRT1-208ENST00000630868 MRRFQ96E11 262 aaKnown RBP7.23□□□□□ -1.25
CDRT1-208ENST00000630868 SEPT9Q9UHD8 586 aaPredicted RBP7.23□□□□□ -1.25
CDRT1-208ENST00000630868 IGF1RP08069 1367 aa7.22□□□□□ -1.25
CDRT1-208ENST00000630868 GLI2P10070 1586 aa7.22□□□□□ -1.25
CDRT1-208ENST00000630868 ZNF16P17020 682 aaPredicted RBP7.22□□□□□ -1.25
CDRT1-208ENST00000630868 ABCC2Q92887 1545 aa7.22□□□□□ -1.25
CDRT1-208ENST00000630868 TSPOAP1O95153 1857 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms