RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 BRD4O60885 1362 aaPredicted RBP23.04■■□□□ 1.28
CDC42EP4-209ENST00000630622 TNS3Q68CZ2 1445 aa23.03■■□□□ 1.28
CDC42EP4-209ENST00000630622 SPATA31A3Q5VYP0 1347 aa23.03■■□□□ 1.28
CDC42EP4-209ENST00000630622 EDC4Q6P2E9 1401 aaKnown RBP23.02■■□□□ 1.28
CDC42EP4-209ENST00000630622 SHPRHQ149N8 1683 aa23.01■■□□□ 1.27
CDC42EP4-209ENST00000630622 LRRC59Q96AG4 307 aaKnown RBP23.01■■□□□ 1.27
CDC42EP4-209ENST00000630622 CARD14Q9BXL6 1004 aa23■■□□□ 1.27
CDC42EP4-209ENST00000630622 TTC21BQ7Z4L5 1316 aa23■■□□□ 1.27
CDC42EP4-209ENST00000630622 PIK3C2AO00443 1686 aa23■■□□□ 1.27
CDC42EP4-209ENST00000630622 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
CDC42EP4-209ENST00000630622 ILDR1Q86SU0 546 aaPredicted RBP22.99■■□□□ 1.27
CDC42EP4-209ENST00000630622 PANK3Q9H999 370 aa22.99■■□□□ 1.27
CDC42EP4-209ENST00000630622 COL22A1Q8NFW1 1626 aaPredicted RBP22.99■■□□□ 1.27
CDC42EP4-209ENST00000630622 PAK3O75914 559 aaPredicted RBP22.98■■□□□ 1.27
CDC42EP4-209ENST00000630622 PNPLA6Q8IY17 1366 aa22.98■■□□□ 1.27
CDC42EP4-209ENST00000630622 TTC21AQ8NDW8 1320 aa22.97■■□□□ 1.27
CDC42EP4-209ENST00000630622 JCADQ9P266 1359 aa22.97■■□□□ 1.27
CDC42EP4-209ENST00000630622 ARHGEF10O15013 1369 aa22.96■■□□□ 1.27
CDC42EP4-209ENST00000630622 NSD3Q9BZ95 1437 aa22.96■■□□□ 1.27
CDC42EP4-209ENST00000630622 MARF1Q9Y4F3 1742 aaKnown RBP22.96■■□□□ 1.27
CDC42EP4-209ENST00000630622 MED1Q15648 1581 aaPredicted RBP22.95■■□□□ 1.26
CDC42EP4-209ENST00000630622 CRYBG1Q9Y4K1 1723 aa22.95■■□□□ 1.26
CDC42EP4-209ENST00000630622 KIF20BQ96Q89 1820 aa22.94■■□□□ 1.26
CDC42EP4-209ENST00000630622 USP54Q70EL1 1684 aa22.94■■□□□ 1.26
CDC42EP4-209ENST00000630622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.94■■□□□ 1.26
CDC42EP4-209ENST00000630622 ABCA3Q99758 1704 aa22.94■■□□□ 1.26
CDC42EP4-209ENST00000630622 LMOD2Q6P5Q4 547 aa22.92■■□□□ 1.26
CDC42EP4-209ENST00000630622 ABTB2Q8N961 1025 aa22.92■■□□□ 1.26
CDC42EP4-209ENST00000630622 NME9Q86XW9 330 aa22.91■■□□□ 1.26
CDC42EP4-209ENST00000630622 PER1O15534 1290 aaPredicted RBP22.9■■□□□ 1.26
CDC42EP4-209ENST00000630622 NUTM2GQ5VZR2 741 aa22.9■■□□□ 1.26
CDC42EP4-209ENST00000630622 PHRF1Q9P1Y6 1649 aaKnown RBP22.9■■□□□ 1.26
CDC42EP4-209ENST00000630622 USP31Q70CQ4 1352 aa22.89■■□□□ 1.26
CDC42EP4-209ENST00000630622 FYB1O15117 783 aa22.88■■□□□ 1.25
CDC42EP4-209ENST00000630622 ZRANB1Q9UGI0 708 aa22.88■■□□□ 1.25
CDC42EP4-209ENST00000630622 USP19O94966 1318 aa22.87■■□□□ 1.25
CDC42EP4-209ENST00000630622 CGNL1Q0VF96 1302 aa22.87■■□□□ 1.25
CDC42EP4-209ENST00000630622 OVOS2A0A0J9YW53 1432 aa22.87■■□□□ 1.25
CDC42EP4-209ENST00000630622 OVOS2Q6IE36 1432 aa22.87■■□□□ 1.25
CDC42EP4-209ENST00000630622 ANKRD26Q9UPS8 1709 aa22.87■■□□□ 1.25
CDC42EP4-209ENST00000630622 SLIT3O75094 1523 aa22.87■■□□□ 1.25
CDC42EP4-209ENST00000630622 SPATA31A6Q5VVP1 1343 aa22.86■■□□□ 1.25
CDC42EP4-209ENST00000630622 NLRP6P59044 892 aa22.86■■□□□ 1.25
CDC42EP4-209ENST00000630622 DDX10Q13206 875 aaKnown RBP22.86■■□□□ 1.25
CDC42EP4-209ENST00000630622 NLRP13Q86W25 1043 aa22.86■■□□□ 1.25
CDC42EP4-209ENST00000630622 CABLES1Q8TDN4 633 aa22.85■■□□□ 1.25
CDC42EP4-209ENST00000630622 KNSTRNQ9Y448 316 aa22.85■■□□□ 1.25
CDC42EP4-209ENST00000630622 LRP6O75581 1613 aa22.83■■□□□ 1.25
CDC42EP4-209ENST00000630622 AMER1Q5JTC6 1135 aaPredicted RBP22.83■■□□□ 1.25
CDC42EP4-209ENST00000630622 GGNBP2Q9H3C7 697 aa22.83■■□□□ 1.25
CDC42EP4-209ENST00000630622 NSD2O96028 1365 aa22.81■■□□□ 1.24
CDC42EP4-209ENST00000630622 PLEKHG5O94827 1062 aa22.81■■□□□ 1.24
CDC42EP4-209ENST00000630622 NFAT5O94916 1531 aa22.81■■□□□ 1.24
CDC42EP4-209ENST00000630622 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
CDC42EP4-209ENST00000630622 COG3Q96JB2 828 aa22.8■■□□□ 1.24
CDC42EP4-209ENST00000630622 NUTM2BA6NNL0 878 aaPredicted RBP22.79■■□□□ 1.24
CDC42EP4-209ENST00000630622 NUTM2EB1AL46 878 aaPredicted RBP22.79■■□□□ 1.24
CDC42EP4-209ENST00000630622 NUTM2AQ8IVF1 878 aaPredicted RBP22.79■■□□□ 1.24
CDC42EP4-209ENST00000630622 GCP02774 474 aa22.78■■□□□ 1.24
CDC42EP4-209ENST00000630622 HAP1P54257 671 aaPredicted RBP22.75■■□□□ 1.23
CDC42EP4-209ENST00000630622 KCNH5Q8NCM2 988 aa22.74■■□□□ 1.23
CDC42EP4-209ENST00000630622 CPDO75976 1380 aa22.74■■□□□ 1.23
CDC42EP4-209ENST00000630622 LTN1O94822 1766 aa22.73■■□□□ 1.23
CDC42EP4-209ENST00000630622 ADAMTS2O95450 1211 aa22.73■■□□□ 1.23
CDC42EP4-209ENST00000630622 SOX12O15370 315 aa22.72■■□□□ 1.23
CDC42EP4-209ENST00000630622 CC2D1BQ5T0F9 858 aaKnown RBP22.72■■□□□ 1.23
CDC42EP4-209ENST00000630622 KIAA0232Q92628 1395 aa22.72■■□□□ 1.23
CDC42EP4-209ENST00000630622 ZC3H6P61129 1189 aaKnown RBP22.71■■□□□ 1.23
CDC42EP4-209ENST00000630622 COL18A1P39060 1754 aa22.71■■□□□ 1.23
CDC42EP4-209ENST00000630622 COL14A1Q05707 1796 aaKnown RBP22.71■■□□□ 1.23
CDC42EP4-209ENST00000630622 FBLN1P23142 703 aa22.7■■□□□ 1.22
CDC42EP4-209ENST00000630622 ARHGEF25Q86VW2 580 aa22.7■■□□□ 1.22
CDC42EP4-209ENST00000630622 PLCH1Q4KWH8 1693 aa22.69■■□□□ 1.22
CDC42EP4-209ENST00000630622 LMO7Q8WWI1 1683 aa22.69■■□□□ 1.22
CDC42EP4-209ENST00000630622 MORC1Q86VD1 984 aa22.69■■□□□ 1.22
CDC42EP4-209ENST00000630622 MAP2P11137 1827 aaKnown RBP22.68■■□□□ 1.22
CDC42EP4-209ENST00000630622 AATKQ6ZMQ8 1374 aa22.68■■□□□ 1.22
CDC42EP4-209ENST00000630622 PRDM11Q9NQV5 511 aa22.68■■□□□ 1.22
CDC42EP4-209ENST00000630622 FAM83GA6ND36 823 aa22.67■■□□□ 1.22
CDC42EP4-209ENST00000630622 ABCC6O95255 1503 aa22.67■■□□□ 1.22
CDC42EP4-209ENST00000630622 NWD2Q9ULI1 1742 aa22.66■■□□□ 1.22
CDC42EP4-209ENST00000630622 CNGB1Q14028 1251 aaPredicted RBP22.66■■□□□ 1.22
CDC42EP4-209ENST00000630622 MEX3CQ5U5Q3 659 aaKnown RBP22.66■■□□□ 1.22
CDC42EP4-209ENST00000630622 PEAK1Q9H792 1746 aa22.65■■□□□ 1.22
CDC42EP4-209ENST00000630622 MAP3K19Q56UN5 1328 aa22.65■■□□□ 1.22
CDC42EP4-209ENST00000630622 TNNT2P45379 298 aaPredicted RBP22.65■■□□□ 1.22
CDC42EP4-209ENST00000630622 CHRNA2Q15822 529 aa22.65■■□□□ 1.22
CDC42EP4-209ENST00000630622 C8orf37Q96NL8 207 aa22.65■■□□□ 1.22
CDC42EP4-209ENST00000630622 SLIT2O94813 1529 aa22.65■■□□□ 1.22
CDC42EP4-209ENST00000630622 RGPD5Q99666 1765 aa22.65■■□□□ 1.22
CDC42EP4-209ENST00000630622 RRS1Q15050 365 aaKnown RBP22.64■■□□□ 1.21
CDC42EP4-209ENST00000630622 NRAPQ86VF7 1730 aa22.64■■□□□ 1.21
CDC42EP4-209ENST00000630622 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
CDC42EP4-209ENST00000630622 CAMTA1Q9Y6Y1 1673 aa22.63■■□□□ 1.21
CDC42EP4-209ENST00000630622 FNBP4Q8N3X1 1017 aaPredicted RBP22.62■■□□□ 1.21
CDC42EP4-209ENST00000630622 NGLY1Q96IV0 654 aa22.62■■□□□ 1.21
CDC42EP4-209ENST00000630622 POLKQ9UBT6 870 aa22.62■■□□□ 1.21
CDC42EP4-209ENST00000630622 SMG6Q86US8 1419 aaKnown RBP22.62■■□□□ 1.21
CDC42EP4-209ENST00000630622 ZBTB7CA1YPR0 619 aa22.61■■□□□ 1.21
CDC42EP4-209ENST00000630622 EMILIN1Q9Y6C2 1016 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms