RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	PLEKHG5	O94827	1062 aa		32.6	■■■□□ 2.81
SRRM2-231	ENST00000630499	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.54	■■■□□ 2.8
SRRM2-231	ENST00000630499	NUDT16	Q96DE0	195 aa	Known RBP	32.52	■■■□□ 2.8
SRRM2-231	ENST00000630499	NGDN	Q8NEJ9	315 aa	Known RBP	32.51	■■■□□ 2.79
SRRM2-231	ENST00000630499	BTG4	Q9NY30	223 aa		32.51	■■■□□ 2.79
SRRM2-231	ENST00000630499	ZRANB1	Q9UGI0	708 aa		32.51	■■■□□ 2.79
SRRM2-231	ENST00000630499	POLR3A	O14802	1390 aa	Predicted RBP	32.5	■■■□□ 2.79
SRRM2-231	ENST00000630499	THSD7A	Q9UPZ6	1657 aa		32.5	■■■□□ 2.79
SRRM2-231	ENST00000630499	KRT27	Q7Z3Y8	459 aa		32.48	■■■□□ 2.79
SRRM2-231	ENST00000630499	CCDC9	Q9Y3X0	531 aa	Known RBP	32.48	■■■□□ 2.79
SRRM2-231	ENST00000630499	CDK19	Q9BWU1	502 aa		32.46	■■■□□ 2.79
SRRM2-231	ENST00000630499	DEFB132	Q7Z7B7	95 aa		32.45	■■■□□ 2.79
SRRM2-231	ENST00000630499	SPATA31A5	Q5VU36	1347 aa		32.44	■■■□□ 2.78
SRRM2-231	ENST00000630499	SPATA31A7	Q8IWB4	1347 aa		32.44	■■■□□ 2.78
SRRM2-231	ENST00000630499	FAM98C	Q17RN3	349 aa	Known RBP	32.43	■■■□□ 2.78
SRRM2-231	ENST00000630499	NBPF1	Q3BBV0	1214 aa		32.43	■■■□□ 2.78
SRRM2-231	ENST00000630499	PAK3	O75914	559 aa	Predicted RBP	32.42	■■■□□ 2.78
SRRM2-231	ENST00000630499	PLEKHG3	A1L390	1219 aa		32.4	■■■□□ 2.78
SRRM2-231	ENST00000630499	KIAA0232	Q92628	1395 aa		32.4	■■■□□ 2.78
SRRM2-231	ENST00000630499	CCDC61	Q9Y6R9	512 aa		32.39	■■■□□ 2.78
SRRM2-231	ENST00000630499	ACE	P12821	1306 aa		32.39	■■■□□ 2.78
SRRM2-231	ENST00000630499	NRK	Q7Z2Y5	1582 aa		32.39	■■■□□ 2.78
SRRM2-231	ENST00000630499	NBPF8	Q3BBV2	869 aa		32.37	■■■□□ 2.77
SRRM2-231	ENST00000630499	PRDM11	Q9NQV5	511 aa		32.37	■■■□□ 2.77
SRRM2-231	ENST00000630499	RGPD1	P0DJD0	1748 aa		32.36	■■■□□ 2.77
SRRM2-231	ENST00000630499	TNS1	Q9HBL0	1735 aa	Known RBP	32.34	■■■□□ 2.77
SRRM2-231	ENST00000630499	LMO7	Q8WWI1	1683 aa		32.34	■■■□□ 2.77
SRRM2-231	ENST00000630499	QRICH2	Q9H0J4	1663 aa		32.34	■■■□□ 2.77
SRRM2-231	ENST00000630499	SPATA31A1	Q5TZJ5	1347 aa		32.32	■■■□□ 2.76
SRRM2-231	ENST00000630499	SF3B2	Q13435	895 aa	Known RBP	32.31	■■■□□ 2.76
SRRM2-231	ENST00000630499	USP19	O94966	1318 aa		32.3	■■■□□ 2.76
SRRM2-231	ENST00000630499	CHRNA2	Q15822	529 aa		32.3	■■■□□ 2.76
SRRM2-231	ENST00000630499	NUTM2G	Q5VZR2	741 aa		32.29	■■■□□ 2.76
SRRM2-231	ENST00000630499	CAMTA1	Q9Y6Y1	1673 aa		32.29	■■■□□ 2.76
SRRM2-231	ENST00000630499	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.28	■■■□□ 2.76
SRRM2-231	ENST00000630499		A0A0G2JS52	829 aa		32.28	■■■□□ 2.76
SRRM2-231	ENST00000630499	MYT1	Q01538	1121 aa		32.28	■■■□□ 2.76
SRRM2-231	ENST00000630499	CPD	O75976	1380 aa		32.28	■■■□□ 2.76
SRRM2-231	ENST00000630499	DISP2	A7MBM2	1401 aa		32.27	■■■□□ 2.76
SRRM2-231	ENST00000630499	PPIP5K1	Q6PFW1	1433 aa		32.27	■■■□□ 2.76
SRRM2-231	ENST00000630499	LRP5	O75197	1615 aa		32.27	■■■□□ 2.76
SRRM2-231	ENST00000630499	TRPM1	Q7Z4N2	1603 aa		32.27	■■■□□ 2.76
SRRM2-231	ENST00000630499	ZC3H6	P61129	1189 aa	Known RBP	32.26	■■■□□ 2.75
SRRM2-231	ENST00000630499	FAM182B	Q5T319	152 aa		32.26	■■■□□ 2.75
SRRM2-231	ENST00000630499	SSH2	Q76I76	1423 aa		32.25	■■■□□ 2.75
SRRM2-231	ENST00000630499	BAG6	P46379	1132 aa		32.23	■■■□□ 2.75
SRRM2-231	ENST00000630499	L3MBTL2	Q969R5	705 aa		32.22	■■■□□ 2.75
SRRM2-231	ENST00000630499	BRD4	O60885	1362 aa	Predicted RBP	32.21	■■■□□ 2.75
SRRM2-231	ENST00000630499	ABTB2	Q8N961	1025 aa		32.21	■■■□□ 2.75
SRRM2-231	ENST00000630499	CABP2	Q9NPB3	220 aa		32.21	■■■□□ 2.75
SRRM2-231	ENST00000630499	SRPK2	P78362	688 aa	Known RBP	32.19	■■■□□ 2.74
SRRM2-231	ENST00000630499	STRN4	Q9NRL3	753 aa		32.19	■■■□□ 2.74
SRRM2-231	ENST00000630499	USP6	P35125	1406 aa		32.17	■■■□□ 2.74
SRRM2-231	ENST00000630499	SLIT3	O75094	1523 aa		32.17	■■■□□ 2.74
SRRM2-231	ENST00000630499	BARGIN	Q6ZT62	677 aa		32.17	■■■□□ 2.74
SRRM2-231	ENST00000630499	PIK3C2A	O00443	1686 aa		32.16	■■■□□ 2.74
SRRM2-231	ENST00000630499	EN1	Q05925	392 aa	Predicted RBP	32.16	■■■□□ 2.74
SRRM2-231	ENST00000630499	GC	P02774	474 aa		32.14	■■■□□ 2.74
SRRM2-231	ENST00000630499	LARP1	Q6PKG0	1096 aa	Known RBP	32.14	■■■□□ 2.74
SRRM2-231	ENST00000630499	COL5A2	P05997	1499 aa	Predicted RBP	32.14	■■■□□ 2.74
SRRM2-231	ENST00000630499	PARP4	Q9UKK3	1724 aa	Known RBP	32.14	■■■□□ 2.74
SRRM2-231	ENST00000630499	NLRP13	Q86W25	1043 aa		32.13	■■■□□ 2.73
SRRM2-231	ENST00000630499	COL18A1	P39060	1754 aa		32.12	■■■□□ 2.73
SRRM2-231	ENST00000630499	SIN3A	Q96ST3	1273 aa		32.12	■■■□□ 2.73
SRRM2-231	ENST00000630499	CABP1	Q9NZU7	370 aa		32.12	■■■□□ 2.73
SRRM2-231	ENST00000630499	AKAP12	Q02952	1782 aa		32.11	■■■□□ 2.73
SRRM2-231	ENST00000630499	FAM196A	Q6ZSG2	479 aa		32.1	■■■□□ 2.73
SRRM2-231	ENST00000630499	RREB1	Q92766	1687 aa		32.09	■■■□□ 2.73
SRRM2-231	ENST00000630499	PSD	A5PKW4	1024 aa	Predicted RBP	32.09	■■■□□ 2.73
SRRM2-231	ENST00000630499	USP35	Q9P2H5	1018 aa		32.08	■■■□□ 2.73
SRRM2-231	ENST00000630499	EVA1C	P58658	441 aa		32.07	■■■□□ 2.72
SRRM2-231	ENST00000630499	TCP11L2	Q8N4U5	519 aa		32.07	■■■□□ 2.72
SRRM2-231	ENST00000630499	CAMKK2	Q96RR4	588 aa		32.07	■■■□□ 2.72
SRRM2-231	ENST00000630499	TRIM37	O94972	964 aa		32.05	■■■□□ 2.72
SRRM2-231	ENST00000630499	EZH2	Q15910	746 aa	Known RBP	32.05	■■■□□ 2.72
SRRM2-231	ENST00000630499	THRAP3	Q9Y2W1	955 aa	Known RBP	32.05	■■■□□ 2.72
SRRM2-231	ENST00000630499	PEAK1	Q9H792	1746 aa		32.05	■■■□□ 2.72
SRRM2-231	ENST00000630499	AATK	Q6ZMQ8	1374 aa		32.05	■■■□□ 2.72
SRRM2-231	ENST00000630499	EVC2	Q86UK5	1308 aa		32.03	■■■□□ 2.72
SRRM2-231	ENST00000630499	CRB1	P82279	1406 aa		32.02	■■■□□ 2.72
SRRM2-231	ENST00000630499	NUP188	Q5SRE5	1749 aa		32.02	■■■□□ 2.72
SRRM2-231	ENST00000630499	WNK3	Q9BYP7	1800 aa		32.02	■■■□□ 2.72
SRRM2-231	ENST00000630499	NLRP6	P59044	892 aa		32.01	■■■□□ 2.71
SRRM2-231	ENST00000630499	ROCK2	O75116	1388 aa	Known RBP	32.01	■■■□□ 2.71
SRRM2-231	ENST00000630499	PARD3	Q8TEW0	1356 aa		32.01	■■■□□ 2.71
SRRM2-231	ENST00000630499	LRRC37A3	O60309	1634 aa		32	■■■□□ 2.71
SRRM2-231	ENST00000630499	CPSF1	Q10570	1443 aa	Known RBP	32	■■■□□ 2.71
SRRM2-231	ENST00000630499	PDE3B	Q13370	1112 aa		31.98	■■■□□ 2.71
SRRM2-231	ENST00000630499	R3HDM1	Q15032	1099 aa	Known RBP	31.97	■■■□□ 2.71
SRRM2-231	ENST00000630499	SBF2	Q86WG5	1849 aa		31.97	■■■□□ 2.71
SRRM2-231	ENST00000630499	MON2	Q7Z3U7	1717 aa		31.97	■■■□□ 2.71
SRRM2-231	ENST00000630499	RGPD5	Q99666	1765 aa		31.96	■■■□□ 2.71
SRRM2-231	ENST00000630499	TTC21B	Q7Z4L5	1316 aa		31.95	■■■□□ 2.7
SRRM2-231	ENST00000630499	NFAT5	O94916	1531 aa		31.95	■■■□□ 2.7
SRRM2-231	ENST00000630499	SBNO2	Q9Y2G9	1366 aa		31.94	■■■□□ 2.7
SRRM2-231	ENST00000630499	APBA3	O96018	575 aa		31.94	■■■□□ 2.7
SRRM2-231	ENST00000630499	NEUROD1	Q13562	356 aa		31.94	■■■□□ 2.7
SRRM2-231	ENST00000630499	AXIN2	Q9Y2T1	843 aa		31.94	■■■□□ 2.7
SRRM2-231	ENST00000630499	USP54	Q70EL1	1684 aa		31.93	■■■□□ 2.7
SRRM2-231	ENST00000630499	ZNF692	Q9BU19	519 aa	Predicted RBP	31.92	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms