RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 TRIM46Q7Z4K8 759 aa8.83□□□□□ -1
CHD2-219ENST00000630016 SLC16A10Q8TF71 515 aa8.83□□□□□ -1
CHD2-219ENST00000630016 STK17AQ9UEE5 414 aa8.83□□□□□ -1
CHD2-219ENST00000630016 TRIM66O15016 1216 aa8.82□□□□□ -1
CHD2-219ENST00000630016 LYPD8Q6UX82 237 aa8.82□□□□□ -1
CHD2-219ENST00000630016 MPNDQ8N594 471 aa8.82□□□□□ -1
CHD2-219ENST00000630016 SPTLC1O15269 473 aa8.81□□□□□ -1
CHD2-219ENST00000630016 NNTQ13423 1086 aa8.81□□□□□ -1
CHD2-219ENST00000630016 PRPF38BQ5VTL8 546 aaKnown RBP8.81□□□□□ -1
CHD2-219ENST00000630016 FAM174AQ8TBP5 190 aa8.81□□□□□ -1
CHD2-219ENST00000630016 AK7Q96M32 723 aa8.81□□□□□ -1
CHD2-219ENST00000630016 CFAP99D6REC4 459 aa8.8□□□□□ -1
CHD2-219ENST00000630016 HRCP23327 699 aa8.8□□□□□ -1
CHD2-219ENST00000630016 NXF1Q9UBU9 619 aaKnown RBP8.8□□□□□ -1
CHD2-219ENST00000630016 PCDHB15Q9Y5E8 787 aa8.8□□□□□ -1
CHD2-219ENST00000630016 ADH1CP00326 375 aa8.79□□□□□ -1
CHD2-219ENST00000630016 RIC3Q7Z5B4 369 aa8.79□□□□□ -1
CHD2-219ENST00000630016 F12P00748 615 aaPredicted RBP8.78□□□□□ -1
CHD2-219ENST00000630016 LCE2CQ5TA81 110 aa8.78□□□□□ -1
CHD2-219ENST00000630016 NPAS3Q8IXF0 933 aa8.78□□□□□ -1
CHD2-219ENST00000630016 MAP10Q9P2G4 905 aa8.78□□□□□ -1
CHD2-219ENST00000630016 SCARF1Q14162 830 aa8.77□□□□□ -1.01
CHD2-219ENST00000630016 CSPP1Q1MSJ5 1256 aa8.77□□□□□ -1.01
CHD2-219ENST00000630016 ZFP42Q96MM3 310 aa8.77□□□□□ -1.01
CHD2-219ENST00000630016 WDR4P57081 412 aaKnown RBP8.76□□□□□ -1.01
CHD2-219ENST00000630016 AGERQ15109 404 aa8.76□□□□□ -1.01
CHD2-219ENST00000630016 MRPL14Q6P1L8 145 aaKnown RBP8.76□□□□□ -1.01
CHD2-219ENST00000630016 CABLES1Q8TDN4 633 aa8.76□□□□□ -1.01
CHD2-219ENST00000630016 TSC1Q92574 1164 aa8.76□□□□□ -1.01
CHD2-219ENST00000630016 IRF7Q92985 503 aa8.76□□□□□ -1.01
CHD2-219ENST00000630016 TIMP2P16035 220 aa8.75□□□□□ -1.01
CHD2-219ENST00000630016 FOXJ1Q92949 421 aa8.75□□□□□ -1.01
CHD2-219ENST00000630016 NUTM2BA6NNL0 878 aaPredicted RBP8.74□□□□□ -1.01
CHD2-219ENST00000630016 NUTM2EB1AL46 878 aaPredicted RBP8.74□□□□□ -1.01
CHD2-219ENST00000630016 ARID5BQ14865 1188 aa8.74□□□□□ -1.01
CHD2-219ENST00000630016 NUTM2DQ5VT03 806 aaPredicted RBP8.74□□□□□ -1.01
CHD2-219ENST00000630016 BPHLQ86WA6 291 aaPredicted RBP8.74□□□□□ -1.01
CHD2-219ENST00000630016 NUTM2AQ8IVF1 878 aaPredicted RBP8.74□□□□□ -1.01
CHD2-219ENST00000630016 FAM181BA6NEQ2 426 aa8.73□□□□□ -1.01
CHD2-219ENST00000630016 PDE4DQ08499 809 aa8.73□□□□□ -1.01
CHD2-219ENST00000630016 MYSM1Q5VVJ2 828 aa8.73□□□□□ -1.01
CHD2-219ENST00000630016 ARMC2Q8NEN0 867 aa8.73□□□□□ -1.01
CHD2-219ENST00000630016 CDK15Q96Q40 435 aa8.73□□□□□ -1.01
CHD2-219ENST00000630016 PURBQ96QR8 312 aaKnown RBP8.73□□□□□ -1.01
CHD2-219ENST00000630016 TUSC1Q2TAM9 212 aa8.72□□□□□ -1.01
CHD2-219ENST00000630016 HELBQ8NG08 1087 aaPredicted RBP8.72□□□□□ -1.01
CHD2-219ENST00000630016 LIMD1Q9UGP4 676 aa8.72□□□□□ -1.01
CHD2-219ENST00000630016 H3BM21 787 aa8.71□□□□□ -1.02
CHD2-219ENST00000630016 PER1O15534 1290 aaPredicted RBP8.71□□□□□ -1.02
CHD2-219ENST00000630016 NR5A1Q13285 461 aa8.71□□□□□ -1.02
CHD2-219ENST00000630016 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
CHD2-219ENST00000630016 ZIC2O95409 532 aaPredicted RBP8.7□□□□□ -1.02
CHD2-219ENST00000630016 GMPRP36959 345 aa8.7□□□□□ -1.02
CHD2-219ENST00000630016 VEGFBP49765 207 aa8.7□□□□□ -1.02
CHD2-219ENST00000630016 QPCTQ16769 361 aa8.7□□□□□ -1.02
CHD2-219ENST00000630016 LILRB3O75022 631 aa8.69□□□□□ -1.02
CHD2-219ENST00000630016 KLF16Q9BXK1 252 aaPredicted RBP8.69□□□□□ -1.02
CHD2-219ENST00000630016 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
CHD2-219ENST00000630016 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
CHD2-219ENST00000630016 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
CHD2-219ENST00000630016 UPP2O95045 317 aa8.67□□□□□ -1.02
CHD2-219ENST00000630016 NR3C2P08235 984 aa8.67□□□□□ -1.02
CHD2-219ENST00000630016 ITPKCQ96DU7 683 aa8.67□□□□□ -1.02
CHD2-219ENST00000630016 FSHRP23945 695 aa8.66□□□□□ -1.02
CHD2-219ENST00000630016 C6orf118Q5T5N4 469 aa8.66□□□□□ -1.02
CHD2-219ENST00000630016 ZSCAN1Q8NBB4 408 aa8.66□□□□□ -1.02
CHD2-219ENST00000630016 C1QTNF2Q9BXJ5 285 aa8.66□□□□□ -1.02
CHD2-219ENST00000630016 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
CHD2-219ENST00000630016 SLC24A3Q9HC58 644 aa8.66□□□□□ -1.02
CHD2-219ENST00000630016 MAP4K5Q9Y4K4 846 aa8.66□□□□□ -1.02
CHD2-219ENST00000630016 ERBB4Q15303 1308 aa8.65□□□□□ -1.02
CHD2-219ENST00000630016 MAN1A2O60476 641 aa8.65□□□□□ -1.02
CHD2-219ENST00000630016 SH3RF1Q7Z6J0 888 aa8.65□□□□□ -1.02
CHD2-219ENST00000630016 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.022e-13■■■□□ 17.6
CHD2-219ENST00000630016 MAGEB6P1A0A0J9YX57 407 aa8.64□□□□□ -1.03
CHD2-219ENST00000630016 SOBPA7XYQ1 873 aa8.64□□□□□ -1.03
CHD2-219ENST00000630016 BMP2P12643 396 aa8.64□□□□□ -1.03
CHD2-219ENST00000630016 GRM5P41594 1212 aa8.64□□□□□ -1.03
CHD2-219ENST00000630016 VASH1Q7L8A9 365 aaPredicted RBP8.64□□□□□ -1.03
CHD2-219ENST00000630016 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
CHD2-219ENST00000630016 MEIOBQ8N635 442 aa8.64□□□□□ -1.03
CHD2-219ENST00000630016 RTL5Q5HYW3 569 aaPredicted RBP8.63□□□□□ -1.03
CHD2-219ENST00000630016 SH3BP5LQ7L8J4 393 aa8.63□□□□□ -1.03
CHD2-219ENST00000630016 TRMT44Q8IYL2 757 aaKnown RBP8.63□□□□□ -1.03
CHD2-219ENST00000630016 CARD14Q9BXL6 1004 aa8.62□□□□□ -1.03
CHD2-219ENST00000630016 VSIG8P0DPA2 414 aa8.61□□□□□ -1.03
CHD2-219ENST00000630016 CCDC116Q8IYX3 515 aa8.61□□□□□ -1.03
CHD2-219ENST00000630016 EMILIN1Q9Y6C2 1016 aa8.61□□□□□ -1.03
CHD2-219ENST00000630016 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
CHD2-219ENST00000630016 TSEN34Q9BSV6 310 aaKnown RBP8.59□□□□□ -1.03
CHD2-219ENST00000630016 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
CHD2-219ENST00000630016 ERFEQ4G0M1 354 aa8.58□□□□□ -1.04
CHD2-219ENST00000630016 SOS2Q07890 1332 aaPredicted RBP8.57□□□□□ -1.04
CHD2-219ENST00000630016 SLC10A4Q96EP9 437 aa8.57□□□□□ -1.04
CHD2-219ENST00000630016 ARHGAP9Q9BRR9 750 aa8.57□□□□□ -1.04
CHD2-219ENST00000630016 PGPEP1Q9NXJ5 209 aa8.57□□□□□ -1.04
CHD2-219ENST00000630016 CDV3Q9UKY7 258 aaKnown RBP8.57□□□□□ -1.04
CHD2-219ENST00000630016 PPFIA3O75145 1194 aa8.56□□□□□ -1.04
CHD2-219ENST00000630016 CTDSPL2Q05D32 466 aa8.56□□□□□ -1.04
CHD2-219ENST00000630016 PDXDC2PQ6P474 469 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms