RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 PTPRUQ92729 1446 aa7.3□□□□□ -1.24
NEK3-211ENST00000629912 MAP2P11137 1827 aaKnown RBP7.3□□□□□ -1.24
NEK3-211ENST00000629912 TCP11L2Q8N4U5 519 aa7.3□□□□□ -1.24
NEK3-211ENST00000629912 AMOTL2Q9Y2J4 779 aa7.3□□□□□ -1.24
NEK3-211ENST00000629912 COL3A1P02461 1466 aaPredicted RBP7.3□□□□□ -1.24
NEK3-211ENST00000629912 ADAMTSL3P82987 1691 aa7.29□□□□□ -1.24
NEK3-211ENST00000629912 DIAPH1O60610 1272 aaKnown RBP7.29□□□□□ -1.24
NEK3-211ENST00000629912 B4GALNT3Q6L9W6 998 aa7.29□□□□□ -1.24
NEK3-211ENST00000629912 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.29□□□□□ -1.24
NEK3-211ENST00000629912 SLC26A8Q96RN1 970 aa7.29□□□□□ -1.24
NEK3-211ENST00000629912 PLEKHF1Q96S99 279 aa7.29□□□□□ -1.24
NEK3-211ENST00000629912 POLKQ9UBT6 870 aa7.29□□□□□ -1.24
NEK3-211ENST00000629912 AATKQ6ZMQ8 1374 aa7.29□□□□□ -1.24
NEK3-211ENST00000629912 MON2Q7Z3U7 1717 aa7.29□□□□□ -1.24
NEK3-211ENST00000629912 PRR36Q9H6K5 1346 aa7.28□□□□□ -1.24
NEK3-211ENST00000629912 PTCH1Q13635 1447 aa7.28□□□□□ -1.24
NEK3-211ENST00000629912 FCHSD2O94868 740 aa7.28□□□□□ -1.24
NEK3-211ENST00000629912 U2AF1L5P0DN76 240 aaPredicted RBP7.28□□□□□ -1.24
NEK3-211ENST00000629912 U2AF1Q01081 240 aaKnown RBP eCLIP7.28□□□□□ -1.24
NEK3-211ENST00000629912 CCDC136Q96JN2 1154 aa7.28□□□□□ -1.24
NEK3-211ENST00000629912 SPINK5Q9NQ38 1064 aaPredicted RBP7.28□□□□□ -1.24
NEK3-211ENST00000629912 NKTRP30414 1462 aaKnown RBP7.28□□□□□ -1.24
NEK3-211ENST00000629912 IQSEC2Q5JU85 1478 aa7.28□□□□□ -1.24
NEK3-211ENST00000629912 ITSN1Q15811 1721 aa7.27□□□□□ -1.25
NEK3-211ENST00000629912 ANKLE2Q86XL3 938 aa7.27□□□□□ -1.25
NEK3-211ENST00000629912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.27□□□□□ -1.25
NEK3-211ENST00000629912 EXOC6Q8TAG9 804 aa7.27□□□□□ -1.25
NEK3-211ENST00000629912 CEP170BQ9Y4F5 1589 aaPredicted RBP7.27□□□□□ -1.25
NEK3-211ENST00000629912 RIMS1Q86UR5 1692 aaKnown RBP7.27□□□□□ -1.25
NEK3-211ENST00000629912 TOPAZ1Q8N9V7 1692 aa7.26□□□□□ -1.25
NEK3-211ENST00000629912 TMPOP42166 694 aaKnown RBP7.26□□□□□ -1.25
NEK3-211ENST00000629912 NME9Q86XW9 330 aa7.26□□□□□ -1.25
NEK3-211ENST00000629912 COG3Q96JB2 828 aa7.26□□□□□ -1.25
NEK3-211ENST00000629912 DMRT2Q9Y5R5 561 aa7.26□□□□□ -1.25
NEK3-211ENST00000629912 CHD2O14647 1828 aaKnown RBP7.26□□□□□ -1.25
NEK3-211ENST00000629912 XRN1Q8IZH2 1706 aaKnown RBP7.26□□□□□ -1.25
NEK3-211ENST00000629912 SSH2Q76I76 1423 aa7.26□□□□□ -1.25
NEK3-211ENST00000629912 ACEP12821 1306 aa7.26□□□□□ -1.25
NEK3-211ENST00000629912 IL16Q14005 1332 aa7.26□□□□□ -1.25
NEK3-211ENST00000629912 TTC21BQ7Z4L5 1316 aa7.26□□□□□ -1.25
NEK3-211ENST00000629912 NCKAP5LQ9HCH0 1330 aa7.26□□□□□ -1.25
NEK3-211ENST00000629912 ZNF142P52746 1687 aaPredicted RBP7.25□□□□□ -1.25
NEK3-211ENST00000629912 U2SURPO15042 1029 aaKnown RBP7.25□□□□□ -1.25
NEK3-211ENST00000629912 CT47B1P0C2W7 299 aaPredicted RBP7.25□□□□□ -1.25
NEK3-211ENST00000629912 IL13P35225 146 aa7.25□□□□□ -1.25
NEK3-211ENST00000629912 TTC21AQ8NDW8 1320 aa7.25□□□□□ -1.25
NEK3-211ENST00000629912 PLIN1O60240 522 aa7.24□□□□□ -1.25
NEK3-211ENST00000629912 PDE3AQ14432 1141 aa7.24□□□□□ -1.25
NEK3-211ENST00000629912 PLPPR3Q6T4P5 718 aa7.24□□□□□ -1.25
NEK3-211ENST00000629912 CRBNQ96SW2 442 aa7.24□□□□□ -1.25
NEK3-211ENST00000629912 MYH16Q9H6N6 1097 aa7.24□□□□□ -1.25
NEK3-211ENST00000629912 ZRANB1Q9UGI0 708 aa7.24□□□□□ -1.25
NEK3-211ENST00000629912 TRIM35Q9UPQ4 493 aa7.24□□□□□ -1.25
NEK3-211ENST00000629912 RRP7AQ9Y3A4 280 aaKnown RBP7.24□□□□□ -1.25
NEK3-211ENST00000629912 ANKARQ7Z5J8 1434 aa7.24□□□□□ -1.25
NEK3-211ENST00000629912 CDK12Q9NYV4 1490 aaPredicted RBP7.24□□□□□ -1.25
NEK3-211ENST00000629912 USP31Q70CQ4 1352 aa7.23□□□□□ -1.25
NEK3-211ENST00000629912 KCNA6P17658 529 aa7.23□□□□□ -1.25
NEK3-211ENST00000629912 NEUROD2Q15784 382 aa7.23□□□□□ -1.25
NEK3-211ENST00000629912 RSPH6AQ9H0K4 717 aa7.23□□□□□ -1.25
NEK3-211ENST00000629912 RBM19Q9Y4C8 960 aaKnown RBP7.23□□□□□ -1.25
NEK3-211ENST00000629912 USP6P35125 1406 aa7.23□□□□□ -1.25
NEK3-211ENST00000629912 NRKQ7Z2Y5 1582 aa7.23□□□□□ -1.25
NEK3-211ENST00000629912 MAPK8IP3Q9UPT6 1336 aa7.23□□□□□ -1.25
NEK3-211ENST00000629912 RGPD8O14715 1765 aaPredicted RBP7.23□□□□□ -1.25
NEK3-211ENST00000629912 OVOS2A0A0J9YW53 1432 aa7.22□□□□□ -1.25
NEK3-211ENST00000629912 OVOS2Q6IE36 1432 aa7.22□□□□□ -1.25
NEK3-211ENST00000629912 NEFMP07197 916 aa7.22□□□□□ -1.25
NEK3-211ENST00000629912 FBLN1P23142 703 aa7.22□□□□□ -1.25
NEK3-211ENST00000629912 RARSP54136 660 aaKnown RBP7.22□□□□□ -1.25
NEK3-211ENST00000629912 RIPK4P57078 832 aa7.22□□□□□ -1.25
NEK3-211ENST00000629912 AAMPQ13685 434 aa7.22□□□□□ -1.25
NEK3-211ENST00000629912 EMILIN1Q9Y6C2 1016 aa7.22□□□□□ -1.25
NEK3-211ENST00000629912 FMN2Q9NZ56 1722 aa7.21□□□□□ -1.25
NEK3-211ENST00000629912 BCAR3O75815 825 aa7.21□□□□□ -1.26
NEK3-211ENST00000629912 NFE2L2Q16236 605 aa7.21□□□□□ -1.26
NEK3-211ENST00000629912 C20orf194Q5TEA3 1177 aa7.21□□□□□ -1.26
NEK3-211ENST00000629912 NGDNQ8NEJ9 315 aaKnown RBP7.21□□□□□ -1.26
NEK3-211ENST00000629912 NALCNQ8IZF0 1738 aa7.21□□□□□ -1.26
NEK3-211ENST00000629912 TCERG1O14776 1098 aaKnown RBP7.2□□□□□ -1.26
NEK3-211ENST00000629912 PPM1GO15355 546 aaPredicted RBP7.2□□□□□ -1.26
NEK3-211ENST00000629912 PRKAR2BP31323 418 aa7.2□□□□□ -1.26
NEK3-211ENST00000629912 CALD1Q05682 793 aaKnown RBP7.2□□□□□ -1.26
NEK3-211ENST00000629912 ZNF428Q96B54 188 aa7.2□□□□□ -1.26
NEK3-211ENST00000629912 NPHP4O75161 1426 aaPredicted RBP7.19□□□□□ -1.26
NEK3-211ENST00000629912 NUTM2FA1L443 756 aa7.19□□□□□ -1.26
NEK3-211ENST00000629912 MS4A1P11836 297 aa7.19□□□□□ -1.26
NEK3-211ENST00000629912 RRS1Q15050 365 aaKnown RBP7.19□□□□□ -1.26
NEK3-211ENST00000629912 PMFBP1Q8TBY8 1022 aa7.19□□□□□ -1.26
NEK3-211ENST00000629912 PHACTR3Q96KR7 559 aa7.19□□□□□ -1.26
NEK3-211ENST00000629912 KIF24Q5T7B8 1368 aa7.19□□□□□ -1.26
NEK3-211ENST00000629912 USP54Q70EL1 1684 aa7.19□□□□□ -1.26
NEK3-211ENST00000629912 LRRC7Q96NW7 1537 aa7.18□□□□□ -1.26
NEK3-211ENST00000629912 ZNF853P0CG23 659 aa7.18□□□□□ -1.26
NEK3-211ENST00000629912 BRPF1P55201 1214 aaPredicted RBP7.18□□□□□ -1.26
NEK3-211ENST00000629912 EXOSC9Q06265 439 aaKnown RBP7.18□□□□□ -1.26
NEK3-211ENST00000629912 LMOD3Q0VAK6 560 aa7.18□□□□□ -1.26
NEK3-211ENST00000629912 EIF4A2Q14240 407 aaKnown RBP7.18□□□□□ -1.26
NEK3-211ENST00000629912 CENPQQ7L2Z9 268 aaPredicted RBP7.18□□□□□ -1.26
NEK3-211ENST00000629912 KDM2BQ8NHM5 1336 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms