RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 AKAP12Q02952 1782 aa13.65□□□□□ -0.22
FOXCUT-201ENST00000628509 POLR3AO14802 1390 aaPredicted RBP13.64□□□□□ -0.23
FOXCUT-201ENST00000628509 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
FOXCUT-201ENST00000628509 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
FOXCUT-201ENST00000628509 MON2Q7Z3U7 1717 aa13.64□□□□□ -0.23
FOXCUT-201ENST00000628509 ACEP12821 1306 aa13.64□□□□□ -0.23
FOXCUT-201ENST00000628509 KIF20BQ96Q89 1820 aa13.63□□□□□ -0.23
FOXCUT-201ENST00000628509 COG3Q96JB2 828 aa13.63□□□□□ -0.23
FOXCUT-201ENST00000628509 ANKRD26Q9UPS8 1709 aa13.63□□□□□ -0.23
FOXCUT-201ENST00000628509 CENPBP07199 599 aaPredicted RBP13.62□□□□□ -0.23
FOXCUT-201ENST00000628509 PSME1Q06323 249 aa13.62□□□□□ -0.23
FOXCUT-201ENST00000628509 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
FOXCUT-201ENST00000628509 ESCO1Q5FWF5 840 aa13.62□□□□□ -0.23
FOXCUT-201ENST00000628509 USP6P35125 1406 aa13.62□□□□□ -0.23
FOXCUT-201ENST00000628509 PRR36Q9H6K5 1346 aa13.62□□□□□ -0.23
FOXCUT-201ENST00000628509 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
FOXCUT-201ENST00000628509 NUTM2FA1L443 756 aa13.61□□□□□ -0.23
FOXCUT-201ENST00000628509 POTEHQ6S545 545 aa13.6□□□□□ -0.23
FOXCUT-201ENST00000628509 ZNF335Q9H4Z2 1342 aaPredicted RBP13.6□□□□□ -0.23
FOXCUT-201ENST00000628509 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
FOXCUT-201ENST00000628509 STRCP1A6NGW2 1772 aa13.59□□□□□ -0.23
FOXCUT-201ENST00000628509 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
FOXCUT-201ENST00000628509 FYB1O15117 783 aa13.58□□□□□ -0.24
FOXCUT-201ENST00000628509 PPP2R1AP30153 589 aa13.58□□□□□ -0.24
FOXCUT-201ENST00000628509 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.24
FOXCUT-201ENST00000628509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.24
FOXCUT-201ENST00000628509 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
FOXCUT-201ENST00000628509 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
FOXCUT-201ENST00000628509 NPHP3Q7Z494 1330 aa13.58□□□□□ -0.24
FOXCUT-201ENST00000628509 TTC21BQ7Z4L5 1316 aa13.58□□□□□ -0.24
FOXCUT-201ENST00000628509 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.24
FOXCUT-201ENST00000628509 NUDCQ9Y266 331 aa13.57□□□□□ -0.24
FOXCUT-201ENST00000628509 INSRP06213 1382 aa13.57□□□□□ -0.24
FOXCUT-201ENST00000628509 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
FOXCUT-201ENST00000628509 GGNBP2Q9H3C7 697 aa13.56□□□□□ -0.24
FOXCUT-201ENST00000628509 AATKQ6ZMQ8 1374 aa13.56□□□□□ -0.24
FOXCUT-201ENST00000628509 MST1RQ04912 1400 aa13.56□□□□□ -0.24
FOXCUT-201ENST00000628509 NRKQ7Z2Y5 1582 aa13.55□□□□□ -0.24
FOXCUT-201ENST00000628509 RBM33Q96EV2 1170 aaKnown RBP13.55□□□□□ -0.24
FOXCUT-201ENST00000628509 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
FOXCUT-201ENST00000628509 KCNH5Q8NCM2 988 aa13.54□□□□□ -0.24
FOXCUT-201ENST00000628509 USP31Q70CQ4 1352 aa13.54□□□□□ -0.24
FOXCUT-201ENST00000628509 FAM9BQ8IZU0 186 aa13.53□□□□□ -0.24
FOXCUT-201ENST00000628509 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
FOXCUT-201ENST00000628509 SLAIN2Q9P270 581 aa13.53□□□□□ -0.24
FOXCUT-201ENST00000628509 ABCB7O75027 752 aa13.52□□□□□ -0.25
FOXCUT-201ENST00000628509 NEFMP07197 916 aa13.52□□□□□ -0.25
FOXCUT-201ENST00000628509 NLRP6P59044 892 aa13.52□□□□□ -0.25
FOXCUT-201ENST00000628509 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
FOXCUT-201ENST00000628509 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
FOXCUT-201ENST00000628509 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
FOXCUT-201ENST00000628509 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
FOXCUT-201ENST00000628509 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
FOXCUT-201ENST00000628509 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
FOXCUT-201ENST00000628509 NME9Q86XW9 330 aa13.51□□□□□ -0.25
FOXCUT-201ENST00000628509 IQSEC2Q5JU85 1478 aa13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 ARHGEF10O15013 1369 aa13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 FOXO3O43524 673 aa13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 TOM1O60784 492 aa13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 MTHFSP49914 203 aa13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 PNISRQ8TF01 805 aaKnown RBP13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 YTHDC1Q96MU7 727 aaKnown RBP13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 ORAI2Q96SN7 254 aa13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
FOXCUT-201ENST00000628509 OVOS2A0A0J9YW53 1432 aa13.49□□□□□ -0.25
FOXCUT-201ENST00000628509 OVOS2Q6IE36 1432 aa13.49□□□□□ -0.25
FOXCUT-201ENST00000628509 DIAPH1O60610 1272 aaKnown RBP13.47□□□□□ -0.25
FOXCUT-201ENST00000628509 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
FOXCUT-201ENST00000628509 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
FOXCUT-201ENST00000628509 LTBP4Q8N2S1 1624 aa13.46□□□□□ -0.25
FOXCUT-201ENST00000628509 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
FOXCUT-201ENST00000628509 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
FOXCUT-201ENST00000628509 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
FOXCUT-201ENST00000628509 SMG6Q86US8 1419 aaKnown RBP13.46□□□□□ -0.26
FOXCUT-201ENST00000628509 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
FOXCUT-201ENST00000628509 AMPHP49418 695 aa13.45□□□□□ -0.26
FOXCUT-201ENST00000628509 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
FOXCUT-201ENST00000628509 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
FOXCUT-201ENST00000628509 PIK3C2AO00443 1686 aa13.44□□□□□ -0.26
FOXCUT-201ENST00000628509 POLKQ9UBT6 870 aa13.44□□□□□ -0.26
FOXCUT-201ENST00000628509 TNS3Q68CZ2 1445 aa13.44□□□□□ -0.26
FOXCUT-201ENST00000628509 FLT4P35916 1363 aa13.44□□□□□ -0.26
FOXCUT-201ENST00000628509 PNPLA6Q8IY17 1366 aa13.44□□□□□ -0.26
FOXCUT-201ENST00000628509 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
FOXCUT-201ENST00000628509 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
FOXCUT-201ENST00000628509 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
FOXCUT-201ENST00000628509 MAPK8IP3Q9UPT6 1336 aa13.41□□□□□ -0.26
FOXCUT-201ENST00000628509 U2AF1L5P0DN76 240 aaPredicted RBP13.41□□□□□ -0.26
FOXCUT-201ENST00000628509 HAP1P54257 671 aaPredicted RBP13.41□□□□□ -0.26
FOXCUT-201ENST00000628509 U2AF1Q01081 240 aaKnown RBP eCLIP13.41□□□□□ -0.26
FOXCUT-201ENST00000628509 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
FOXCUT-201ENST00000628509 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
FOXCUT-201ENST00000628509 SPATA31A3Q5VYP0 1347 aa13.4□□□□□ -0.26
FOXCUT-201ENST00000628509 U2SURPO15042 1029 aaKnown RBP13.4□□□□□ -0.26
FOXCUT-201ENST00000628509 PDE3BQ13370 1112 aa13.4□□□□□ -0.26
FOXCUT-201ENST00000628509 PXDNQ92626 1479 aa13.4□□□□□ -0.26
FOXCUT-201ENST00000628509 ALS2Q96Q42 1657 aa13.4□□□□□ -0.26
FOXCUT-201ENST00000628509 USP19O94966 1318 aa13.39□□□□□ -0.27
FOXCUT-201ENST00000628509 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms