RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 PLEKHG5O94827 1062 aa19.05■□□□□ 0.64
SOX2-OT-248ENST00000628496 TMF1P82094 1093 aa19.05■□□□□ 0.64
SOX2-OT-248ENST00000628496 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
SOX2-OT-248ENST00000628496 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
SOX2-OT-248ENST00000628496 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
SOX2-OT-248ENST00000628496 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.64
SOX2-OT-248ENST00000628496 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
SOX2-OT-248ENST00000628496 TMC1Q8TDI8 760 aa19.03■□□□□ 0.64
SOX2-OT-248ENST00000628496 BRD4O60885 1362 aaPredicted RBP19.03■□□□□ 0.64
SOX2-OT-248ENST00000628496 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.64
SOX2-OT-248ENST00000628496 ILDR2Q71H61 639 aa19.02■□□□□ 0.64
SOX2-OT-248ENST00000628496 AFF2P51816 1311 aa19.01■□□□□ 0.63
SOX2-OT-248ENST00000628496 ABCA3Q99758 1704 aa19.01■□□□□ 0.63
SOX2-OT-248ENST00000628496 POTEAQ6S8J7 498 aa19.01■□□□□ 0.63
SOX2-OT-248ENST00000628496 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
SOX2-OT-248ENST00000628496 HAP1P54257 671 aaPredicted RBP19■□□□□ 0.63
SOX2-OT-248ENST00000628496 ABTB2Q8N961 1025 aa19■□□□□ 0.63
SOX2-OT-248ENST00000628496 KTN1Q86UP2 1357 aaKnown RBP19■□□□□ 0.63
SOX2-OT-248ENST00000628496 NINLQ9Y2I6 1382 aa19■□□□□ 0.63
SOX2-OT-248ENST00000628496 NRKQ7Z2Y5 1582 aa18.99■□□□□ 0.63
SOX2-OT-248ENST00000628496 A0A1W2PP64 1363 aa18.99■□□□□ 0.63
SOX2-OT-248ENST00000628496 NGLY1Q96IV0 654 aa18.99■□□□□ 0.63
SOX2-OT-248ENST00000628496 CRYBG1Q9Y4K1 1723 aa18.99■□□□□ 0.63
SOX2-OT-248ENST00000628496 TTC21BQ7Z4L5 1316 aa18.99■□□□□ 0.63
SOX2-OT-248ENST00000628496 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
SOX2-OT-248ENST00000628496 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
SOX2-OT-248ENST00000628496 ZNF772Q68DY9 489 aaPredicted RBP18.97■□□□□ 0.63
SOX2-OT-248ENST00000628496 HDGFL2Q7Z4V5 671 aaPredicted RBP18.97■□□□□ 0.63
SOX2-OT-248ENST00000628496 FNBP4Q8N3X1 1017 aaPredicted RBP18.97■□□□□ 0.63
SOX2-OT-248ENST00000628496 USP19O94966 1318 aa18.97■□□□□ 0.63
SOX2-OT-248ENST00000628496 TERF2IPQ9NYB0 399 aa18.96■□□□□ 0.63
SOX2-OT-248ENST00000628496 MON2Q7Z3U7 1717 aa18.96■□□□□ 0.63
SOX2-OT-248ENST00000628496 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
SOX2-OT-248ENST00000628496 PHRF1Q9P1Y6 1649 aaKnown RBP18.95■□□□□ 0.62
SOX2-OT-248ENST00000628496 TTC21AQ8NDW8 1320 aa18.95■□□□□ 0.62
SOX2-OT-248ENST00000628496 MARF1Q9Y4F3 1742 aaKnown RBP18.94■□□□□ 0.62
SOX2-OT-248ENST00000628496 EDC4Q6P2E9 1401 aaKnown RBP18.94■□□□□ 0.62
SOX2-OT-248ENST00000628496 NLRP13Q86W25 1043 aa18.94■□□□□ 0.62
SOX2-OT-248ENST00000628496 BCL9LQ86UU0 1499 aa18.94■□□□□ 0.62
SOX2-OT-248ENST00000628496 SLIT2O94813 1529 aa18.94■□□□□ 0.62
SOX2-OT-248ENST00000628496 ANKRD36BQ8N2N9 1353 aa18.93■□□□□ 0.62
SOX2-OT-248ENST00000628496 FAM83GA6ND36 823 aa18.93■□□□□ 0.62
SOX2-OT-248ENST00000628496 NLRP6P59044 892 aa18.93■□□□□ 0.62
SOX2-OT-248ENST00000628496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.93■□□□□ 0.62
SOX2-OT-248ENST00000628496 USP21Q9UK80 565 aa18.93■□□□□ 0.62
SOX2-OT-248ENST00000628496 MYOM1P52179 1685 aa18.92■□□□□ 0.62
SOX2-OT-248ENST00000628496 SLIT3O75094 1523 aa18.91■□□□□ 0.62
SOX2-OT-248ENST00000628496 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
SOX2-OT-248ENST00000628496 KIAA0232Q92628 1395 aa18.91■□□□□ 0.62
SOX2-OT-248ENST00000628496 GCP02774 474 aa18.9■□□□□ 0.62
SOX2-OT-248ENST00000628496 KCNA4P22459 653 aa18.9■□□□□ 0.62
SOX2-OT-248ENST00000628496 NME9Q86XW9 330 aa18.9■□□□□ 0.62
SOX2-OT-248ENST00000628496 QTRT2Q9H974 415 aaKnown RBP18.9■□□□□ 0.62
SOX2-OT-248ENST00000628496 ZRANB1Q9UGI0 708 aa18.9■□□□□ 0.62
SOX2-OT-248ENST00000628496 ZC3H6P61129 1189 aaKnown RBP18.89■□□□□ 0.61
SOX2-OT-248ENST00000628496 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
SOX2-OT-248ENST00000628496 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
SOX2-OT-248ENST00000628496 ATRNO75882 1429 aa18.89■□□□□ 0.61
SOX2-OT-248ENST00000628496 CPDO75976 1380 aa18.88■□□□□ 0.61
SOX2-OT-248ENST00000628496 USP31Q70CQ4 1352 aa18.88■□□□□ 0.61
SOX2-OT-248ENST00000628496 PLCH1Q4KWH8 1693 aa18.88■□□□□ 0.61
SOX2-OT-248ENST00000628496 CHRNA2Q15822 529 aa18.87■□□□□ 0.61
SOX2-OT-248ENST00000628496 UNC5CLQ8IV45 518 aa18.87■□□□□ 0.61
SOX2-OT-248ENST00000628496 TRPC5Q9UL62 973 aaPredicted RBP18.87■□□□□ 0.61
SOX2-OT-248ENST00000628496 COL14A1Q05707 1796 aaKnown RBP18.86■□□□□ 0.61
SOX2-OT-248ENST00000628496 OVOS2A0A0J9YW53 1432 aa18.85■□□□□ 0.61
SOX2-OT-248ENST00000628496 OVOS2Q6IE36 1432 aa18.85■□□□□ 0.61
SOX2-OT-248ENST00000628496 RXRBP28702 533 aa18.85■□□□□ 0.61
SOX2-OT-248ENST00000628496 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
SOX2-OT-248ENST00000628496 BTG4Q9NY30 223 aa18.85■□□□□ 0.61
SOX2-OT-248ENST00000628496 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.85■□□□□ 0.61
SOX2-OT-248ENST00000628496 NWD2Q9ULI1 1742 aa18.84■□□□□ 0.61
SOX2-OT-248ENST00000628496 USP54Q70EL1 1684 aa18.84■□□□□ 0.61
SOX2-OT-248ENST00000628496 NFAT5O94916 1531 aa18.84■□□□□ 0.61
SOX2-OT-248ENST00000628496 KIF7Q2M1P5 1343 aa18.83■□□□□ 0.61
SOX2-OT-248ENST00000628496 RBM6P78332 1123 aaKnown RBP18.83■□□□□ 0.6
SOX2-OT-248ENST00000628496 NRAPQ86VF7 1730 aa18.83■□□□□ 0.6
SOX2-OT-248ENST00000628496 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.6
SOX2-OT-248ENST00000628496 SOX12O15370 315 aa18.82■□□□□ 0.6
SOX2-OT-248ENST00000628496 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
SOX2-OT-248ENST00000628496 VPS72Q15906 364 aa18.81■□□□□ 0.6
SOX2-OT-248ENST00000628496 LMO7Q8WWI1 1683 aa18.81■□□□□ 0.6
SOX2-OT-248ENST00000628496 CAMTA1Q9Y6Y1 1673 aa18.8■□□□□ 0.6
SOX2-OT-248ENST00000628496 CDK12Q9NYV4 1490 aaPredicted RBP18.8■□□□□ 0.6
SOX2-OT-248ENST00000628496 FYB1O15117 783 aa18.8■□□□□ 0.6
SOX2-OT-248ENST00000628496 ARHGEF25Q86VW2 580 aa18.8■□□□□ 0.6
SOX2-OT-248ENST00000628496 GJD4Q96KN9 370 aaPredicted RBP18.8■□□□□ 0.6
SOX2-OT-248ENST00000628496 RGS12O14924 1447 aa18.8■□□□□ 0.6
SOX2-OT-248ENST00000628496 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
SOX2-OT-248ENST00000628496 GLI3P10071 1580 aa18.79■□□□□ 0.6
SOX2-OT-248ENST00000628496 AATKQ6ZMQ8 1374 aa18.79■□□□□ 0.6
SOX2-OT-248ENST00000628496 GGNBP2Q9H3C7 697 aa18.78■□□□□ 0.6
SOX2-OT-248ENST00000628496 COG3Q96JB2 828 aa18.77■□□□□ 0.6
SOX2-OT-248ENST00000628496 PANK3Q9H999 370 aa18.77■□□□□ 0.6
SOX2-OT-248ENST00000628496 STRN4Q9NRL3 753 aa18.76■□□□□ 0.59
SOX2-OT-248ENST00000628496 CCDC9Q9Y3X0 531 aaKnown RBP18.76■□□□□ 0.59
SOX2-OT-248ENST00000628496 CCDC7Q96M83 1385 aa18.76■□□□□ 0.59
SOX2-OT-248ENST00000628496 COL5A2P05997 1499 aaPredicted RBP18.76■□□□□ 0.59
SOX2-OT-248ENST00000628496 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
SOX2-OT-248ENST00000628496 AXIN2Q9Y2T1 843 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms