RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 SSH2Q76I76 1423 aa11.14□□□□□ -0.63
CCDC163-204ENST00000628293 ATAD2Q6PL18 1390 aa11.14□□□□□ -0.63
CCDC163-204ENST00000628293 PLCH1Q4KWH8 1693 aa11.14□□□□□ -0.63
CCDC163-204ENST00000628293 USP6P35125 1406 aa11.13□□□□□ -0.63
CCDC163-204ENST00000628293 CPSF1Q10570 1443 aaKnown RBP11.13□□□□□ -0.63
CCDC163-204ENST00000628293 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.12□□□□□ -0.63
CCDC163-204ENST00000628293 PSME1Q06323 249 aa11.12□□□□□ -0.63
CCDC163-204ENST00000628293 NGDNQ8NEJ9 315 aaKnown RBP11.12□□□□□ -0.63
CCDC163-204ENST00000628293 CABP1Q9NZU7 370 aa11.12□□□□□ -0.63
CCDC163-204ENST00000628293 ARHGEF10O15013 1369 aa11.12□□□□□ -0.63
CCDC163-204ENST00000628293 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
CCDC163-204ENST00000628293 NUTM2BA6NNL0 878 aaPredicted RBP11.11□□□□□ -0.63
CCDC163-204ENST00000628293 NUTM2EB1AL46 878 aaPredicted RBP11.11□□□□□ -0.63
CCDC163-204ENST00000628293 NUTM2AQ8IVF1 878 aaPredicted RBP11.11□□□□□ -0.63
CCDC163-204ENST00000628293 NWD2Q9ULI1 1742 aa11.11□□□□□ -0.63
CCDC163-204ENST00000628293 PUS7Q96PZ0 661 aaKnown RBP11.1□□□□□ -0.63
CCDC163-204ENST00000628293 BRD4O60885 1362 aaPredicted RBP11.09□□□□□ -0.63
CCDC163-204ENST00000628293 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
CCDC163-204ENST00000628293 SLIT3O75094 1523 aa11.09□□□□□ -0.63
CCDC163-204ENST00000628293 COL14A1Q05707 1796 aaKnown RBP11.08□□□□□ -0.64
CCDC163-204ENST00000628293 ADAMTS2O95450 1211 aa11.08□□□□□ -0.64
CCDC163-204ENST00000628293 SLIT2O94813 1529 aa11.08□□□□□ -0.64
CCDC163-204ENST00000628293 A0A1W2PP64 1363 aa11.07□□□□□ -0.64
CCDC163-204ENST00000628293 HSPA5P11021 654 aaKnown RBP11.07□□□□□ -0.64
CCDC163-204ENST00000628293 POTEAQ6S8J7 498 aa11.07□□□□□ -0.64
CCDC163-204ENST00000628293 SLC12A5Q9H2X9 1139 aa11.07□□□□□ -0.64
CCDC163-204ENST00000628293 LMO7Q8WWI1 1683 aa11.07□□□□□ -0.64
CCDC163-204ENST00000628293 KIF20BQ96Q89 1820 aa11.07□□□□□ -0.64
CCDC163-204ENST00000628293 USP19O94966 1318 aa11.07□□□□□ -0.64
CCDC163-204ENST00000628293 AFF2P51816 1311 aa11.07□□□□□ -0.64
CCDC163-204ENST00000628293 NINLQ9Y2I6 1382 aa11.06□□□□□ -0.64
CCDC163-204ENST00000628293 COL18A1P39060 1754 aa11.06□□□□□ -0.64
CCDC163-204ENST00000628293 PAK3O75914 559 aaPredicted RBP11.06□□□□□ -0.64
CCDC163-204ENST00000628293 TMF1P82094 1093 aa11.06□□□□□ -0.64
CCDC163-204ENST00000628293 MEX3CQ5U5Q3 659 aaKnown RBP11.06□□□□□ -0.64
CCDC163-204ENST00000628293 LMOD2Q6P5Q4 547 aa11.06□□□□□ -0.64
CCDC163-204ENST00000628293 BCL9LQ86UU0 1499 aa11.06□□□□□ -0.64
CCDC163-204ENST00000628293 KTN1Q86UP2 1357 aaKnown RBP11.05□□□□□ -0.64
CCDC163-204ENST00000628293 EIF4G2P78344 907 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC163-204ENST00000628293 EDC4Q6P2E9 1401 aaKnown RBP11.05□□□□□ -0.64
CCDC163-204ENST00000628293 C8orf37Q96NL8 207 aa11.05□□□□□ -0.64
CCDC163-204ENST00000628293 TTC21BQ7Z4L5 1316 aa11.05□□□□□ -0.64
CCDC163-204ENST00000628293 NFAT5O94916 1531 aa11.04□□□□□ -0.64
CCDC163-204ENST00000628293 GLI3P10071 1580 aa11.04□□□□□ -0.64
CCDC163-204ENST00000628293 ATRNO75882 1429 aa11.04□□□□□ -0.64
CCDC163-204ENST00000628293 LTN1O94822 1766 aa11.04□□□□□ -0.64
CCDC163-204ENST00000628293 RGPD5Q99666 1765 aa11.04□□□□□ -0.64
CCDC163-204ENST00000628293 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
CCDC163-204ENST00000628293 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
CCDC163-204ENST00000628293 NUTM2GQ5VZR2 741 aa11.04□□□□□ -0.64
CCDC163-204ENST00000628293 FNBP4Q8N3X1 1017 aaPredicted RBP11.04□□□□□ -0.64
CCDC163-204ENST00000628293 ANKRD36BQ8N2N9 1353 aa11.03□□□□□ -0.64
CCDC163-204ENST00000628293 ABTB2Q8N961 1025 aa11.03□□□□□ -0.64
CCDC163-204ENST00000628293 TMC1Q8TDI8 760 aa11.03□□□□□ -0.64
CCDC163-204ENST00000628293 ZNF692Q9BU19 519 aaPredicted RBP11.03□□□□□ -0.64
CCDC163-204ENST00000628293 TTC21AQ8NDW8 1320 aa11.03□□□□□ -0.64
CCDC163-204ENST00000628293 OVOS2A0A0J9YW53 1432 aa11.02□□□□□ -0.64
CCDC163-204ENST00000628293 OVOS2Q6IE36 1432 aa11.02□□□□□ -0.64
CCDC163-204ENST00000628293 ANKRD26Q9UPS8 1709 aa11.02□□□□□ -0.65
CCDC163-204ENST00000628293 KCNA4P22459 653 aa11.02□□□□□ -0.65
CCDC163-204ENST00000628293 ZNF772Q68DY9 489 aaPredicted RBP11.02□□□□□ -0.65
CCDC163-204ENST00000628293 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
CCDC163-204ENST00000628293 USP31Q70CQ4 1352 aa11.02□□□□□ -0.65
CCDC163-204ENST00000628293 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
CCDC163-204ENST00000628293 CAMTA1Q9Y6Y1 1673 aa11.01□□□□□ -0.65
CCDC163-204ENST00000628293 CPDO75976 1380 aa11.01□□□□□ -0.65
CCDC163-204ENST00000628293 KIAA0232Q92628 1395 aa11.01□□□□□ -0.65
CCDC163-204ENST00000628293 CDK12Q9NYV4 1490 aaPredicted RBP11□□□□□ -0.65
CCDC163-204ENST00000628293 FAM83GA6ND36 823 aa11□□□□□ -0.65
CCDC163-204ENST00000628293 CDCA8Q53HL2 280 aa11□□□□□ -0.65
CCDC163-204ENST00000628293 HDGFL2Q7Z4V5 671 aaPredicted RBP11□□□□□ -0.65
CCDC163-204ENST00000628293 NLRP13Q86W25 1043 aa11□□□□□ -0.65
CCDC163-204ENST00000628293 NME9Q86XW9 330 aa11□□□□□ -0.65
CCDC163-204ENST00000628293 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
CCDC163-204ENST00000628293 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
CCDC163-204ENST00000628293 USP21Q9UK80 565 aa11□□□□□ -0.65
CCDC163-204ENST00000628293 BRWD3Q6RI45 1802 aa11□□□□□ -0.65
CCDC163-204ENST00000628293 HAP1P54257 671 aaPredicted RBP10.99□□□□□ -0.65
CCDC163-204ENST00000628293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC163-204ENST00000628293 WNK3Q9BYP7 1800 aa10.99□□□□□ -0.65
CCDC163-204ENST00000628293 RGS12O14924 1447 aa10.99□□□□□ -0.65
CCDC163-204ENST00000628293 GCP02774 474 aa10.98□□□□□ -0.65
CCDC163-204ENST00000628293 NLRP6P59044 892 aa10.98□□□□□ -0.65
CCDC163-204ENST00000628293 ABCC6O95255 1503 aa10.98□□□□□ -0.65
CCDC163-204ENST00000628293 ZC3H6P61129 1189 aaKnown RBP10.97□□□□□ -0.65
CCDC163-204ENST00000628293 CHRNA2Q15822 529 aa10.97□□□□□ -0.65
CCDC163-204ENST00000628293 UNC5CLQ8IV45 518 aa10.97□□□□□ -0.65
CCDC163-204ENST00000628293 CARD14Q9BXL6 1004 aa10.97□□□□□ -0.65
CCDC163-204ENST00000628293 QTRT2Q9H974 415 aaKnown RBP10.97□□□□□ -0.65
CCDC163-204ENST00000628293 PRDM11Q9NQV5 511 aa10.97□□□□□ -0.65
CCDC163-204ENST00000628293 NSD3Q9BZ95 1437 aa10.97□□□□□ -0.65
CCDC163-204ENST00000628293 THSD7AQ9UPZ6 1657 aa10.97□□□□□ -0.65
CCDC163-204ENST00000628293 COL5A2P05997 1499 aaPredicted RBP10.96□□□□□ -0.65
CCDC163-204ENST00000628293 KIF7Q2M1P5 1343 aa10.96□□□□□ -0.65
CCDC163-204ENST00000628293 BTG4Q9NY30 223 aa10.96□□□□□ -0.65
CCDC163-204ENST00000628293 TRPC5Q9UL62 973 aaPredicted RBP10.96□□□□□ -0.65
CCDC163-204ENST00000628293 PEAK1Q9H792 1746 aa10.95□□□□□ -0.66
CCDC163-204ENST00000628293 RBM6P78332 1123 aaKnown RBP10.95□□□□□ -0.66
CCDC163-204ENST00000628293 AATKQ6ZMQ8 1374 aa10.94□□□□□ -0.66
CCDC163-204ENST00000628293 MAP2P11137 1827 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms