RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 LMOD2Q6P5Q4 547 aa26.01■■□□□ 1.75
MECP2-216ENST00000627864 ILDR1Q86SU0 546 aaPredicted RBP26.01■■□□□ 1.75
MECP2-216ENST00000627864 ALS2Q96Q42 1657 aa26■■□□□ 1.75
MECP2-216ENST00000627864 NRKQ7Z2Y5 1582 aa26■■□□□ 1.75
MECP2-216ENST00000627864 BRD4O60885 1362 aaPredicted RBP25.99■■□□□ 1.75
MECP2-216ENST00000627864 SPATA31A3Q5VYP0 1347 aa25.99■■□□□ 1.75
MECP2-216ENST00000627864 PANK3Q9H999 370 aa25.99■■□□□ 1.75
MECP2-216ENST00000627864 TNS3Q68CZ2 1445 aa25.98■■□□□ 1.75
MECP2-216ENST00000627864 TTC21BQ7Z4L5 1316 aa25.97■■□□□ 1.75
MECP2-216ENST00000627864 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.97■■□□□ 1.75
MECP2-216ENST00000627864 EDC4Q6P2E9 1401 aaKnown RBP25.97■■□□□ 1.75
MECP2-216ENST00000627864 SSH2Q76I76 1423 aa25.97■■□□□ 1.75
MECP2-216ENST00000627864 SHPRHQ149N8 1683 aa25.96■■□□□ 1.75
MECP2-216ENST00000627864 CARD14Q9BXL6 1004 aa25.96■■□□□ 1.75
MECP2-216ENST00000627864 ABTB2Q8N961 1025 aa25.94■■□□□ 1.74
MECP2-216ENST00000627864 JCADQ9P266 1359 aa25.94■■□□□ 1.74
MECP2-216ENST00000627864 KIF20BQ96Q89 1820 aa25.93■■□□□ 1.74
MECP2-216ENST00000627864 TTC21AQ8NDW8 1320 aa25.93■■□□□ 1.74
MECP2-216ENST00000627864 NUTM2GQ5VZR2 741 aa25.93■■□□□ 1.74
MECP2-216ENST00000627864 ARHGEF10O15013 1369 aa25.93■■□□□ 1.74
MECP2-216ENST00000627864 PNPLA6Q8IY17 1366 aa25.93■■□□□ 1.74
MECP2-216ENST00000627864 PIK3C2AO00443 1686 aa25.93■■□□□ 1.74
MECP2-216ENST00000627864 NSD3Q9BZ95 1437 aa25.92■■□□□ 1.74
MECP2-216ENST00000627864 PLEKHG5O94827 1062 aa25.92■■□□□ 1.74
MECP2-216ENST00000627864 COL22A1Q8NFW1 1626 aaPredicted RBP25.91■■□□□ 1.74
MECP2-216ENST00000627864 NME9Q86XW9 330 aa25.89■■□□□ 1.74
MECP2-216ENST00000627864 NLRP6P59044 892 aa25.88■■□□□ 1.73
MECP2-216ENST00000627864 DDX10Q13206 875 aaKnown RBP25.88■■□□□ 1.73
MECP2-216ENST00000627864 NLRP13Q86W25 1043 aa25.87■■□□□ 1.73
MECP2-216ENST00000627864 ZRANB1Q9UGI0 708 aa25.87■■□□□ 1.73
MECP2-216ENST00000627864 MARF1Q9Y4F3 1742 aaKnown RBP25.87■■□□□ 1.73
MECP2-216ENST00000627864 ABCA3Q99758 1704 aa25.86■■□□□ 1.73
MECP2-216ENST00000627864 CABLES1Q8TDN4 633 aa25.86■■□□□ 1.73
MECP2-216ENST00000627864 KNSTRNQ9Y448 316 aa25.86■■□□□ 1.73
MECP2-216ENST00000627864 CRYBG1Q9Y4K1 1723 aa25.85■■□□□ 1.73
MECP2-216ENST00000627864 NUTM2BA6NNL0 878 aaPredicted RBP25.84■■□□□ 1.73
MECP2-216ENST00000627864 NUTM2EB1AL46 878 aaPredicted RBP25.84■■□□□ 1.73
MECP2-216ENST00000627864 NUTM2AQ8IVF1 878 aaPredicted RBP25.84■■□□□ 1.73
MECP2-216ENST00000627864 CGNL1Q0VF96 1302 aa25.84■■□□□ 1.73
MECP2-216ENST00000627864 MED1Q15648 1581 aaPredicted RBP25.83■■□□□ 1.73
MECP2-216ENST00000627864 FYB1O15117 783 aa25.83■■□□□ 1.73
MECP2-216ENST00000627864 PHRF1Q9P1Y6 1649 aaKnown RBP25.83■■□□□ 1.73
MECP2-216ENST00000627864 USP54Q70EL1 1684 aa25.83■■□□□ 1.73
MECP2-216ENST00000627864 PER1O15534 1290 aaPredicted RBP25.82■■□□□ 1.72
MECP2-216ENST00000627864 HAP1P54257 671 aaPredicted RBP25.82■■□□□ 1.72
MECP2-216ENST00000627864 GGNBP2Q9H3C7 697 aa25.82■■□□□ 1.72
MECP2-216ENST00000627864 ANKRD26Q9UPS8 1709 aa25.82■■□□□ 1.72
MECP2-216ENST00000627864 SPATA31A6Q5VVP1 1343 aa25.82■■□□□ 1.72
MECP2-216ENST00000627864 USP31Q70CQ4 1352 aa25.81■■□□□ 1.72
MECP2-216ENST00000627864 COG3Q96JB2 828 aa25.79■■□□□ 1.72
MECP2-216ENST00000627864 USP19O94966 1318 aa25.78■■□□□ 1.72
MECP2-216ENST00000627864 OVOS2A0A0J9YW53 1432 aa25.76■■□□□ 1.71
MECP2-216ENST00000627864 OVOS2Q6IE36 1432 aa25.76■■□□□ 1.71
MECP2-216ENST00000627864 SLIT3O75094 1523 aa25.76■■□□□ 1.71
MECP2-216ENST00000627864 SOX12O15370 315 aa25.75■■□□□ 1.71
MECP2-216ENST00000627864 CNGB1Q14028 1251 aaPredicted RBP25.75■■□□□ 1.71
MECP2-216ENST00000627864 AMER1Q5JTC6 1135 aaPredicted RBP25.75■■□□□ 1.71
MECP2-216ENST00000627864 LRP6O75581 1613 aa25.74■■□□□ 1.71
MECP2-216ENST00000627864 ADAMTS2O95450 1211 aa25.74■■□□□ 1.71
MECP2-216ENST00000627864 GCP02774 474 aa25.74■■□□□ 1.71
MECP2-216ENST00000627864 MAP2P11137 1827 aaKnown RBP25.72■■□□□ 1.71
MECP2-216ENST00000627864 NSD2O96028 1365 aa25.72■■□□□ 1.71
MECP2-216ENST00000627864 CC2D1BQ5T0F9 858 aaKnown RBP25.72■■□□□ 1.71
MECP2-216ENST00000627864 KCNH5Q8NCM2 988 aa25.72■■□□□ 1.71
MECP2-216ENST00000627864 LTN1O94822 1766 aa25.72■■□□□ 1.71
MECP2-216ENST00000627864 ZC3H6P61129 1189 aaKnown RBP25.71■■□□□ 1.71
MECP2-216ENST00000627864 MEX3CQ5U5Q3 659 aaKnown RBP25.71■■□□□ 1.71
MECP2-216ENST00000627864 ZBTB7CA1YPR0 619 aa25.69■■□□□ 1.7
MECP2-216ENST00000627864 MORC1Q86VD1 984 aa25.69■■□□□ 1.7
MECP2-216ENST00000627864 NFAT5O94916 1531 aa25.68■■□□□ 1.7
MECP2-216ENST00000627864 NPC1L1Q9UHC9 1359 aa25.68■■□□□ 1.7
MECP2-216ENST00000627864 FBLN1P23142 703 aa25.67■■□□□ 1.7
MECP2-216ENST00000627864 TNNT2P45379 298 aaPredicted RBP25.66■■□□□ 1.7
MECP2-216ENST00000627864 RGPD5Q99666 1765 aa25.66■■□□□ 1.7
MECP2-216ENST00000627864 KIAA0232Q92628 1395 aa25.66■■□□□ 1.7
MECP2-216ENST00000627864 PRDM11Q9NQV5 511 aa25.65■■□□□ 1.7
MECP2-216ENST00000627864 COL14A1Q05707 1796 aaKnown RBP25.64■■□□□ 1.7
MECP2-216ENST00000627864 C8orf37Q96NL8 207 aa25.64■■□□□ 1.7
MECP2-216ENST00000627864 FAM83GA6ND36 823 aa25.63■■□□□ 1.69
MECP2-216ENST00000627864 CHRNA2Q15822 529 aa25.63■■□□□ 1.69
MECP2-216ENST00000627864 NGLY1Q96IV0 654 aa25.63■■□□□ 1.69
MECP2-216ENST00000627864 PLCH1Q4KWH8 1693 aa25.63■■□□□ 1.69
MECP2-216ENST00000627864 CPDO75976 1380 aa25.62■■□□□ 1.69
MECP2-216ENST00000627864 ARHGEF25Q86VW2 580 aa25.62■■□□□ 1.69
MECP2-216ENST00000627864 COL18A1P39060 1754 aa25.61■■□□□ 1.69
MECP2-216ENST00000627864 RRS1Q15050 365 aaKnown RBP25.6■■□□□ 1.69
MECP2-216ENST00000627864 MAP3K19Q56UN5 1328 aa25.58■■□□□ 1.69
MECP2-216ENST00000627864 AATKQ6ZMQ8 1374 aa25.57■■□□□ 1.68
MECP2-216ENST00000627864 NWD2Q9ULI1 1742 aa25.57■■□□□ 1.68
MECP2-216ENST00000627864 LMO7Q8WWI1 1683 aa25.56■■□□□ 1.68
MECP2-216ENST00000627864 AMPHP49418 695 aa25.56■■□□□ 1.68
MECP2-216ENST00000627864 PEAK1Q9H792 1746 aa25.55■■□□□ 1.68
MECP2-216ENST00000627864 EMILIN1Q9Y6C2 1016 aa25.55■■□□□ 1.68
MECP2-216ENST00000627864 AFF2P51816 1311 aa25.55■■□□□ 1.68
MECP2-216ENST00000627864 PPM1GO15355 546 aaPredicted RBP25.54■■□□□ 1.68
MECP2-216ENST00000627864 BTG4Q9NY30 223 aa25.54■■□□□ 1.68
MECP2-216ENST00000627864 POLKQ9UBT6 870 aa25.54■■□□□ 1.68
MECP2-216ENST00000627864 CAMTA1Q9Y6Y1 1673 aa25.53■■□□□ 1.68
MECP2-216ENST00000627864 SLIT2O94813 1529 aa25.53■■□□□ 1.68
MECP2-216ENST00000627864 NRAPQ86VF7 1730 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms