RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 RPGRIP1LQ68CZ1 1315 aa11.36□□□□□ -0.59
CHD2-209ENST00000627185 PIK3C2GO75747 1445 aa11.36□□□□□ -0.59
CHD2-209ENST00000627185 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
CHD2-209ENST00000627185 KIDINS220Q9ULH0 1771 aa11.36□□□□□ -0.59
CHD2-209ENST00000627185 POGZQ7Z3K3 1410 aa11.35□□□□□ -0.59
CHD2-209ENST00000627185 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
CHD2-209ENST00000627185 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHD2-209ENST00000627185 MYO3AQ8NEV4 1616 aa11.35□□□□□ -0.59
CHD2-209ENST00000627185 ARHGAP31Q2M1Z3 1444 aa11.35□□□□□ -0.59
CHD2-209ENST00000627185 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
CHD2-209ENST00000627185 ADGRB3O60242 1522 aa11.34□□□□□ -0.59
CHD2-209ENST00000627185 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
CHD2-209ENST00000627185 DPYSL4O14531 572 aa11.33□□□□□ -0.6
CHD2-209ENST00000627185 IFT172Q9UG01 1749 aa11.32□□□□□ -0.6
CHD2-209ENST00000627185 ASXL1Q8IXJ9 1541 aa11.32□□□□□ -0.6
CHD2-209ENST00000627185 LMOD2Q6P5Q4 547 aa11.32□□□□□ -0.6
CHD2-209ENST00000627185 PANK3Q9H999 370 aa11.32□□□□□ -0.6
CHD2-209ENST00000627185 SPDYE16A6NNV3 312 aaPredicted RBP11.31□□□□□ -0.6
CHD2-209ENST00000627185 PDIA6Q15084 440 aa11.31□□□□□ -0.6
CHD2-209ENST00000627185 ZFYVE9O95405 1425 aa11.31□□□□□ -0.6
CHD2-209ENST00000627185 NOS1P29475 1434 aa11.31□□□□□ -0.6
CHD2-209ENST00000627185 CD109Q6YHK3 1445 aa11.31□□□□□ -0.6
CHD2-209ENST00000627185 FRMPD1Q5SYB0 1578 aa11.3□□□□□ -0.6
CHD2-209ENST00000627185 KIF3BO15066 747 aa11.3□□□□□ -0.6
CHD2-209ENST00000627185 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
CHD2-209ENST00000627185 HECW2Q9P2P5 1572 aa11.29□□□□□ -0.6
CHD2-209ENST00000627185 PPRC1Q5VV67 1664 aaKnown RBP11.29□□□□□ -0.6
CHD2-209ENST00000627185 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
CHD2-209ENST00000627185 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
CHD2-209ENST00000627185 GLI2P10070 1586 aa11.28□□□□□ -0.6
CHD2-209ENST00000627185 NPATQ14207 1427 aa11.27□□□□□ -0.6
CHD2-209ENST00000627185 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
CHD2-209ENST00000627185 KNSTRNQ9Y448 316 aa11.27□□□□□ -0.61
CHD2-209ENST00000627185 KIF1BO60333 1816 aa11.27□□□□□ -0.61
CHD2-209ENST00000627185 ZNF521Q96K83 1311 aa11.27□□□□□ -0.61
CHD2-209ENST00000627185 ERVK-7P63135 1459 aa11.26□□□□□ -0.61
CHD2-209ENST00000627185 POLR3GLQ9BT43 218 aa11.26□□□□□ -0.61
CHD2-209ENST00000627185 C14orf93Q9H972 538 aaKnown RBP11.26□□□□□ -0.61
CHD2-209ENST00000627185 ABCA6Q8N139 1617 aa11.26□□□□□ -0.61
CHD2-209ENST00000627185 ABCC3O15438 1527 aa11.25□□□□□ -0.61
CHD2-209ENST00000627185 ADGRB1O14514 1584 aa11.25□□□□□ -0.61
CHD2-209ENST00000627185 PIK3C2BO00750 1634 aa11.25□□□□□ -0.61
CHD2-209ENST00000627185 KDM5AP29375 1690 aaKnown RBP11.25□□□□□ -0.61
CHD2-209ENST00000627185 MYOM1P52179 1685 aa11.25□□□□□ -0.61
CHD2-209ENST00000627185 ZC3H13Q5T200 1668 aaKnown RBP11.25□□□□□ -0.61
CHD2-209ENST00000627185 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
CHD2-209ENST00000627185 PPP2R1AP30153 589 aa11.25□□□□□ -0.61
CHD2-209ENST00000627185 RRP1P56182 461 aaKnown RBP11.25□□□□□ -0.61
CHD2-209ENST00000627185 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
CHD2-209ENST00000627185 MAP3K9P80192 1104 aa11.24□□□□□ -0.61
CHD2-209ENST00000627185 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
CHD2-209ENST00000627185 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
CHD2-209ENST00000627185 SLC34A2O95436 690 aa11.23□□□□□ -0.61
CHD2-209ENST00000627185 MLLT3P42568 568 aaPredicted RBP11.23□□□□□ -0.61
CHD2-209ENST00000627185 TRMT2AQ8IZ69 625 aaKnown RBP11.23□□□□□ -0.61
CHD2-209ENST00000627185 UPF1Q92900 1129 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHD2-209ENST00000627185 POLR3AO14802 1390 aaPredicted RBP11.23□□□□□ -0.61
CHD2-209ENST00000627185 REREQ9P2R6 1566 aa11.23□□□□□ -0.61
CHD2-209ENST00000627185 PTCD2Q8WV60 388 aaKnown RBP11.22□□□□□ -0.61
CHD2-209ENST00000627185 SLC52A1Q9NWF4 448 aa11.22□□□□□ -0.61
CHD2-209ENST00000627185 NINLQ9Y2I6 1382 aa11.22□□□□□ -0.61
CHD2-209ENST00000627185 NSD2O96028 1365 aa11.21□□□□□ -0.61
CHD2-209ENST00000627185 ADGRF5Q8IZF2 1346 aa11.21□□□□□ -0.61
CHD2-209ENST00000627185 MS4A1P11836 297 aa11.21□□□□□ -0.61
CHD2-209ENST00000627185 PPLO60437 1756 aa11.21□□□□□ -0.62
CHD2-209ENST00000627185 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
CHD2-209ENST00000627185 DIP2CQ9Y2E4 1556 aa11.2□□□□□ -0.62
CHD2-209ENST00000627185 CENPJQ9HC77 1338 aaPredicted RBP11.19□□□□□ -0.62
CHD2-209ENST00000627185 IRX6P78412 446 aaPredicted RBP11.19□□□□□ -0.62
CHD2-209ENST00000627185 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
CHD2-209ENST00000627185 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
CHD2-209ENST00000627185 MROH2AA6NES4 1674 aa11.18□□□□□ -0.62
CHD2-209ENST00000627185 CAMSAP1Q5T5Y3 1602 aa11.18□□□□□ -0.62
CHD2-209ENST00000627185 TCERG1O14776 1098 aaKnown RBP11.18□□□□□ -0.62
CHD2-209ENST00000627185 CC2D1BQ5T0F9 858 aaKnown RBP11.18□□□□□ -0.62
CHD2-209ENST00000627185 CFAP70Q5T0N1 1121 aa11.18□□□□□ -0.62
CHD2-209ENST00000627185 ADAMTS8Q9UP79 889 aa11.18□□□□□ -0.62
CHD2-209ENST00000627185 AGLP35573 1532 aa11.18□□□□□ -0.62
CHD2-209ENST00000627185 UGGT1Q9NYU2 1555 aa11.17□□□□□ -0.62
CHD2-209ENST00000627185 TBC1D12O60347 775 aa11.17□□□□□ -0.62
CHD2-209ENST00000627185 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
CHD2-209ENST00000627185 NEXMIFQ5QGS0 1516 aa11.16□□□□□ -0.62
CHD2-209ENST00000627185 RICTORQ6R327 1708 aa11.16□□□□□ -0.62
CHD2-209ENST00000627185 PTGER2P43116 358 aa11.16□□□□□ -0.62
CHD2-209ENST00000627185 AAMPQ13685 434 aa11.16□□□□□ -0.62
CHD2-209ENST00000627185 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHD2-209ENST00000627185 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
CHD2-209ENST00000627185 MAMSTRQ6ZN01 415 aa11.16□□□□□ -0.62
CHD2-209ENST00000627185 MED14O60244 1454 aa11.15□□□□□ -0.62
CHD2-209ENST00000627185 EVI5O60447 810 aa11.15□□□□□ -0.62
CHD2-209ENST00000627185 SLFN5Q08AF3 891 aa11.14□□□□□ -0.63
CHD2-209ENST00000627185 RBM26Q5T8P6 1007 aaKnown RBP11.14□□□□□ -0.63
CHD2-209ENST00000627185 CARD14Q9BXL6 1004 aa11.14□□□□□ -0.63
CHD2-209ENST00000627185 SCUBE2Q9NQ36 999 aa11.14□□□□□ -0.63
CHD2-209ENST00000627185 PLEKHH1Q9ULM0 1364 aa11.14□□□□□ -0.63
CHD2-209ENST00000627185 CCDC27Q2M243 656 aa11.13□□□□□ -0.63
CHD2-209ENST00000627185 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.13□□□□□ -0.63
CHD2-209ENST00000627185 ANKRD36BQ8N2N9 1353 aa11.13□□□□□ -0.63
CHD2-209ENST00000627185 E9PSI1 815 aa11.12□□□□□ -0.63
CHD2-209ENST00000627185 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms