RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 CGNL1Q0VF96 1302 aa9.36□□□□□ -0.91
CTNNA1-244ENST00000627109 EVC2Q86UK5 1308 aa9.36□□□□□ -0.91
CTNNA1-244ENST00000627109 C3P01024 1663 aa9.36□□□□□ -0.91
CTNNA1-244ENST00000627109 PDE4AP27815 886 aa9.35□□□□□ -0.91
CTNNA1-244ENST00000627109 PLIN1O60240 522 aa9.35□□□□□ -0.91
CTNNA1-244ENST00000627109 WDR63Q8IWG1 891 aa9.35□□□□□ -0.91
CTNNA1-244ENST00000627109 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
CTNNA1-244ENST00000627109 A0A1W2PP64 1363 aa9.35□□□□□ -0.91
CTNNA1-244ENST00000627109 ATAD2Q6PL18 1390 aa9.35□□□□□ -0.91
CTNNA1-244ENST00000627109 AAMPQ13685 434 aa9.35□□□□□ -0.91
CTNNA1-244ENST00000627109 PDE3AQ14432 1141 aa9.35□□□□□ -0.91
CTNNA1-244ENST00000627109 A0A0U1RQG5 324 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 RTL5Q5HYW3 569 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 CHMP4AQ9BY43 222 aa9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 DMRT2Q9Y5R5 561 aa9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 TECPR2O15040 1411 aa9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 UBR1Q8IWV7 1749 aa9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 APAF1O14727 1248 aa9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 TMEM132EQ6IEE7 984 aa9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 RUNDC1Q96C34 613 aa9.34□□□□□ -0.91
CTNNA1-244ENST00000627109 NALCNQ8IZF0 1738 aa9.34□□□□□ -0.92
CTNNA1-244ENST00000627109 RIMS1Q86UR5 1692 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-244ENST00000627109 SLC12A5Q9H2X9 1139 aa9.33□□□□□ -0.92
CTNNA1-244ENST00000627109 PAK3O75914 559 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-244ENST00000627109 ZBTB47Q9UFB7 747 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-244ENST00000627109 TRAK1Q9UPV9 953 aa9.33□□□□□ -0.92
CTNNA1-244ENST00000627109 ITSN1Q15811 1721 aa9.33□□□□□ -0.92
CTNNA1-244ENST00000627109 LTKP29376 864 aa9.32□□□□□ -0.92
CTNNA1-244ENST00000627109 PLEKHF1Q96S99 279 aa9.32□□□□□ -0.92
CTNNA1-244ENST00000627109 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-244ENST00000627109 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
CTNNA1-244ENST00000627109 CCDC146Q8IYE0 955 aa9.31□□□□□ -0.92
CTNNA1-244ENST00000627109 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-244ENST00000627109 NUTM2FA1L443 756 aa9.31□□□□□ -0.92
CTNNA1-244ENST00000627109 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTNNA1-244ENST00000627109 CT47B1P0C2W7 299 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-244ENST00000627109 MORC1Q86VD1 984 aa9.3□□□□□ -0.92
CTNNA1-244ENST00000627109 LRRC7Q96NW7 1537 aa9.3□□□□□ -0.92
CTNNA1-244ENST00000627109 USP54Q70EL1 1684 aa9.3□□□□□ -0.92
CTNNA1-244ENST00000627109 C8orf34Q49A92 452 aa9.3□□□□□ -0.92
CTNNA1-244ENST00000627109 POGKQ9P215 609 aa9.3□□□□□ -0.92
CTNNA1-244ENST00000627109 RGPD1P0DJD0 1748 aa9.3□□□□□ -0.92
CTNNA1-244ENST00000627109 FAM135BQ49AJ0 1406 aa9.3□□□□□ -0.92
CTNNA1-244ENST00000627109 DLG5Q8TDM6 1919 aa9.29□□□□□ -0.92
CTNNA1-244ENST00000627109 PAXIP1Q6ZW49 1069 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-244ENST00000627109 IL16Q14005 1332 aa9.29□□□□□ -0.92
CTNNA1-244ENST00000627109 TNNT2P45379 298 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-244ENST00000627109 MTHFSP49914 203 aa9.28□□□□□ -0.92
CTNNA1-244ENST00000627109 RARSP54136 660 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-244ENST00000627109 SIRT1Q96EB6 747 aa9.28□□□□□ -0.92
CTNNA1-244ENST00000627109 BCAR3O75815 825 aa9.28□□□□□ -0.92
CTNNA1-244ENST00000627109 TCP11L2Q8N4U5 519 aa9.28□□□□□ -0.92
CTNNA1-244ENST00000627109 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-244ENST00000627109 PDE4CQ08493 712 aa9.27□□□□□ -0.92
CTNNA1-244ENST00000627109 RIMS2Q9UQ26 1411 aa9.27□□□□□ -0.93
CTNNA1-244ENST00000627109 CANXP27824 592 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-244ENST00000627109 PROSER2Q86WR7 435 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-244ENST00000627109 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
CTNNA1-244ENST00000627109 AATKQ6ZMQ8 1374 aa9.26□□□□□ -0.93
CTNNA1-244ENST00000627109 FAM161AQ3B820 660 aa9.26□□□□□ -0.93
CTNNA1-244ENST00000627109 CFAP53Q96M91 514 aa9.26□□□□□ -0.93
CTNNA1-244ENST00000627109 LAS1LQ9Y4W2 734 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-244ENST00000627109 FYB1O15117 783 aa9.25□□□□□ -0.93
CTNNA1-244ENST00000627109 EDC4Q6P2E9 1401 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-244ENST00000627109 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-244ENST00000627109 BRPF1P55201 1214 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-244ENST00000627109 CLUAP1Q96AJ1 413 aa9.25□□□□□ -0.93
CTNNA1-244ENST00000627109 CABP2Q9NPB3 220 aa9.25□□□□□ -0.93
CTNNA1-244ENST00000627109 FMN2Q9NZ56 1722 aa9.24□□□□□ -0.93
CTNNA1-244ENST00000627109 USP35Q9P2H5 1018 aa9.24□□□□□ -0.93
CTNNA1-244ENST00000627109 IGHDP01880 384 aa9.24□□□□□ -0.93
CTNNA1-244ENST00000627109 SKAP1Q86WV1 359 aa9.24□□□□□ -0.93
CTNNA1-244ENST00000627109 DDRGK1Q96HY6 314 aa9.24□□□□□ -0.93
CTNNA1-244ENST00000627109 TRIM35Q9UPQ4 493 aa9.24□□□□□ -0.93
CTNNA1-244ENST00000627109 TMEM2Q9UHN6 1383 aa9.24□□□□□ -0.93
CTNNA1-244ENST00000627109 AMOTL2Q9Y2J4 779 aa9.24□□□□□ -0.93
CTNNA1-244ENST00000627109 USP19O94966 1318 aa9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 MARF1Q9Y4F3 1742 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 DEKP35659 375 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 RGS3P49796 1198 aa9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 WAPLQ7Z5K2 1190 aa9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 TERF2IPQ9NYB0 399 aa9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 SETD1BQ9UPS6 1966 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 MAPK8IP3Q9UPT6 1336 aa9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 PRAM1Q96QH2 718 aa9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 MYH16Q9H6N6 1097 aa9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 FER1L4A9Z1Z3 1794 aa9.23□□□□□ -0.93
CTNNA1-244ENST00000627109 NPM3O75607 178 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-244ENST00000627109 PIP4K2BP78356 416 aa9.22□□□□□ -0.93
CTNNA1-244ENST00000627109 PIK3R4Q99570 1358 aa9.22□□□□□ -0.93
CTNNA1-244ENST00000627109 ZNF335Q9H4Z2 1342 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-244ENST00000627109 DIP2AQ14689 1571 aa9.22□□□□□ -0.93
CTNNA1-244ENST00000627109 SLIT1O75093 1534 aa9.22□□□□□ -0.93
CTNNA1-244ENST00000627109 MINK1Q8N4C8 1332 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-244ENST00000627109 N4BP2Q86UW6 1770 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-244ENST00000627109 PEAK1Q9H792 1746 aa9.21□□□□□ -0.93
CTNNA1-244ENST00000627109 XRN1Q8IZH2 1706 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-244ENST00000627109 ADAMTS13Q76LX8 1427 aa9.21□□□□□ -0.94
CTNNA1-244ENST00000627109 RLBP1P12271 317 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms