RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 UGGT2Q9NYU1 1516 aa21.32■■□□□ 1
FARP1-242ENST00000627049 SPC24Q8NBT2 197 aa21.32■■□□□ 1
FARP1-242ENST00000627049 TSPYL4Q9UJ04 414 aa21.32■■□□□ 1
FARP1-242ENST00000627049 CCAR2Q8N163 923 aaKnown RBP21.32■■□□□ 1
FARP1-242ENST00000627049 NSD3Q9BZ95 1437 aa21.32■■□□□ 1
FARP1-242ENST00000627049 NUTM2FA1L443 756 aa21.31■■□□□ 1
FARP1-242ENST00000627049 KLHL40Q2TBA0 621 aa21.31■■□□□ 1
FARP1-242ENST00000627049 RRAGDQ9NQL2 400 aaPredicted RBP21.31■■□□□ 1
FARP1-242ENST00000627049 NGDNQ8NEJ9 315 aaKnown RBP21.31■■□□□ 1
FARP1-242ENST00000627049 GPS2Q13227 327 aa21.31■■□□□ 1
FARP1-242ENST00000627049 HSP90AB4PQ58FF6 505 aa21.31■■□□□ 1
FARP1-242ENST00000627049 TRIM27P14373 513 aa21.3■■□□□ 1
FARP1-242ENST00000627049 LTV1Q96GA3 475 aaPredicted RBP21.3■■□□□ 1
FARP1-242ENST00000627049 SEC24BO95487 1268 aa21.3■■□□□ 1
FARP1-242ENST00000627049 GNAI3P08754 354 aa21.3■■□□□ 1
FARP1-242ENST00000627049 CCDC66A2RUB6 948 aa21.3■■□□□ 1
FARP1-242ENST00000627049 BAG4O95429 457 aaKnown RBP21.3■■□□□ 1
FARP1-242ENST00000627049 KDM2BQ8NHM5 1336 aa21.29■■□□□ 1
FARP1-242ENST00000627049 BCL11BQ9C0K0 894 aaPredicted RBP21.29■■□□□ 1
FARP1-242ENST00000627049 ARGLU1Q9NWB6 273 aaPredicted RBP21.29■■□□□ 1
FARP1-242ENST00000627049 IQGAP2Q13576 1575 aa21.29■■□□□ 1
FARP1-242ENST00000627049 CCDC192P0DO97 292 aa21.29■■□□□ 1
FARP1-242ENST00000627049 BMP2KLQ5H9B9 411 aa21.29■■□□□ 1
FARP1-242ENST00000627049 CCDC73Q6ZRK6 1079 aa21.29■■□□□ 1
FARP1-242ENST00000627049 GORABQ5T7V8 394 aa21.28■■□□□ 1
FARP1-242ENST00000627049 CC2D2AQ9P2K1 1620 aa21.28■■□□□ 1
FARP1-242ENST00000627049 MCM5P33992 734 aa21.28■■□□□ 1
FARP1-242ENST00000627049 C9orf78Q9NZ63 289 aaPredicted RBP21.28■■□□□ 1
FARP1-242ENST00000627049 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.28■■□□□ 1
FARP1-242ENST00000627049 CFAP43Q8NDM7 1665 aa21.27■■□□□ 1
FARP1-242ENST00000627049 EIF2S2P20042 333 aaKnown RBP21.27■■□□□ 1
FARP1-242ENST00000627049 UBTFL1P0CB47 393 aaPredicted RBP21.27■□□□□ 0.99
FARP1-242ENST00000627049 CNTROBQ8N137 903 aa21.27■□□□□ 0.99
FARP1-242ENST00000627049 ALDH1L2Q3SY69 923 aa21.26■□□□□ 0.99
FARP1-242ENST00000627049 RPAP2Q8IXW5 612 aaPredicted RBP21.26■□□□□ 0.99
FARP1-242ENST00000627049 PODXL2Q9NZ53 605 aa21.26■□□□□ 0.99
FARP1-242ENST00000627049 PLEKHH1Q9ULM0 1364 aa21.26■□□□□ 0.99
FARP1-242ENST00000627049 PDCP20941 246 aa21.26■□□□□ 0.99
FARP1-242ENST00000627049 MNS1Q8NEH6 495 aa21.25■□□□□ 0.99
FARP1-242ENST00000627049 GNAI2P04899 355 aa21.25■□□□□ 0.99
FARP1-242ENST00000627049 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
FARP1-242ENST00000627049 HDAC1Q13547 482 aaPredicted RBP21.25■□□□□ 0.99
FARP1-242ENST00000627049 PDCL2Q8N4E4 241 aa21.25■□□□□ 0.99
FARP1-242ENST00000627049 FCHSD2O94868 740 aa21.24■□□□□ 0.99
FARP1-242ENST00000627049 KIAA0586Q9BVV6 1533 aa21.24■□□□□ 0.99
FARP1-242ENST00000627049 PER1O15534 1290 aaPredicted RBP21.24■□□□□ 0.99
FARP1-242ENST00000627049 TBC1D9Q6ZT07 1266 aa21.24■□□□□ 0.99
FARP1-242ENST00000627049 CCDC112Q8NEF3 446 aa21.24■□□□□ 0.99
FARP1-242ENST00000627049 SURF6O75683 361 aaKnown RBP21.23■□□□□ 0.99
FARP1-242ENST00000627049 CCDC141Q6ZP82 1450 aa21.23■□□□□ 0.99
FARP1-242ENST00000627049 SNX21Q969T3 373 aa21.23■□□□□ 0.99
FARP1-242ENST00000627049 PRDM10Q9NQV6 1147 aa21.23■□□□□ 0.99
FARP1-242ENST00000627049 TCOF1Q13428 1488 aaKnown RBP21.23■□□□□ 0.99
FARP1-242ENST00000627049 DYNC1I1O14576 645 aa21.22■□□□□ 0.99
FARP1-242ENST00000627049 PSMA5P28066 241 aa21.22■□□□□ 0.99
FARP1-242ENST00000627049 LRRCC1Q9C099 1032 aa21.22■□□□□ 0.99
FARP1-242ENST00000627049 ABCC11Q96J66 1382 aa21.22■□□□□ 0.99
FARP1-242ENST00000627049 FBXW7Q969H0 707 aa21.22■□□□□ 0.99
FARP1-242ENST00000627049 SLC4A2P04920 1241 aa21.21■□□□□ 0.99
FARP1-242ENST00000627049 NAT10Q9H0A0 1025 aaKnown RBP21.21■□□□□ 0.99
FARP1-242ENST00000627049 G3BP1Q13283 466 aaKnown RBP eCLIP21.2■□□□□ 0.989e-9■□□□□ 8.4
FARP1-242ENST00000627049 TEFQ10587 303 aa21.2■□□□□ 0.98
FARP1-242ENST00000627049 AEBP1Q8IUX7 1158 aa21.2■□□□□ 0.98
FARP1-242ENST00000627049 ARHGEF11O15085 1522 aa21.2■□□□□ 0.98
FARP1-242ENST00000627049 ZSCAN23Q3MJ62 389 aa21.19■□□□□ 0.98
FARP1-242ENST00000627049 CCT4P50991 539 aaKnown RBP21.19■□□□□ 0.98
FARP1-242ENST00000627049 CBX1P83916 185 aa21.19■□□□□ 0.98
FARP1-242ENST00000627049 SDF4Q9BRK5 362 aa21.19■□□□□ 0.98
FARP1-242ENST00000627049 CLASRPQ8N2M8 674 aaKnown RBP21.19■□□□□ 0.98
FARP1-242ENST00000627049 KRT85P78386 507 aa21.18■□□□□ 0.98
FARP1-242ENST00000627049 CREBRFQ8IUR6 639 aa21.18■□□□□ 0.98
FARP1-242ENST00000627049 TNMDQ9H2S6 317 aa21.18■□□□□ 0.98
FARP1-242ENST00000627049 SCAF11Q99590 1463 aaKnown RBP21.18■□□□□ 0.98
FARP1-242ENST00000627049 NUCB1Q02818 461 aa21.17■□□□□ 0.98
FARP1-242ENST00000627049 NFE2L2Q16236 605 aa21.17■□□□□ 0.98
FARP1-242ENST00000627049 TESK2Q96S53 571 aa21.17■□□□□ 0.98
FARP1-242ENST00000627049 SMC5Q8IY18 1101 aa21.17■□□□□ 0.98
FARP1-242ENST00000627049 SRCIN1Q9C0H9 1055 aa21.17■□□□□ 0.98
FARP1-242ENST00000627049 CCDC9Q9Y3X0 531 aaKnown RBP21.17■□□□□ 0.98
FARP1-242ENST00000627049 CCDC30Q5VVM6 783 aa21.17■□□□□ 0.98
FARP1-242ENST00000627049 MAGI1Q96QZ7 1491 aaPredicted RBP21.16■□□□□ 0.98
FARP1-242ENST00000627049 RAB3GAP1Q15042 981 aa21.16■□□□□ 0.98
FARP1-242ENST00000627049 CYP46A1Q9Y6A2 500 aa21.16■□□□□ 0.98
FARP1-242ENST00000627049 PRAM1Q96QH2 718 aa21.15■□□□□ 0.98
FARP1-242ENST00000627049 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
FARP1-242ENST00000627049 PRAG1Q86YV5 1406 aa21.15■□□□□ 0.98
FARP1-242ENST00000627049 KINO60870 393 aaKnown RBP21.15■□□□□ 0.98
FARP1-242ENST00000627049 OFD1O75665 1012 aa21.15■□□□□ 0.98
FARP1-242ENST00000627049 TPM1P09493 284 aa21.15■□□□□ 0.98
FARP1-242ENST00000627049 RLBP1P12271 317 aa21.15■□□□□ 0.98
FARP1-242ENST00000627049 CCDC183Q5T5S1 534 aa21.15■□□□□ 0.98
FARP1-242ENST00000627049 RBM27Q9P2N5 1060 aaKnown RBP21.15■□□□□ 0.98
FARP1-242ENST00000627049 NPHP1O15259 732 aa21.15■□□□□ 0.98
FARP1-242ENST00000627049 USP25Q9UHP3 1055 aa21.15■□□□□ 0.98
FARP1-242ENST00000627049 CPLX1O14810 134 aa21.14■□□□□ 0.98
FARP1-242ENST00000627049 FOSBP53539 338 aa21.14■□□□□ 0.98
FARP1-242ENST00000627049 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
FARP1-242ENST00000627049 CPLX2Q6PUV4 134 aaKnown RBP21.14■□□□□ 0.97
FARP1-242ENST00000627049 TEX14Q8IWB6 1497 aa21.14■□□□□ 0.97
FARP1-242ENST00000627049 CABP1Q9NZU7 370 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms