RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 NGDNQ8NEJ9 315 aaKnown RBP19.68■□□□□ 0.74
SOX2-OT-241ENST00000626948 SIN3AQ96ST3 1273 aa19.68■□□□□ 0.74
SOX2-OT-241ENST00000626948 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
SOX2-OT-241ENST00000626948 POLR3AO14802 1390 aaPredicted RBP19.67■□□□□ 0.74
SOX2-OT-241ENST00000626948 COL14A1Q05707 1796 aaKnown RBP19.67■□□□□ 0.74
SOX2-OT-241ENST00000626948 PHRF1Q9P1Y6 1649 aaKnown RBP19.66■□□□□ 0.74
SOX2-OT-241ENST00000626948 SEPT12Q8IYM1 358 aa19.66■□□□□ 0.74
SOX2-OT-241ENST00000626948 BTG4Q9NY30 223 aa19.64■□□□□ 0.73
SOX2-OT-241ENST00000626948 ACEP12821 1306 aa19.64■□□□□ 0.73
SOX2-OT-241ENST00000626948 PLEKHG3A1L390 1219 aa19.63■□□□□ 0.73
SOX2-OT-241ENST00000626948 PAK3O75914 559 aaPredicted RBP19.63■□□□□ 0.73
SOX2-OT-241ENST00000626948 QRICH2Q9H0J4 1663 aa19.62■□□□□ 0.73
SOX2-OT-241ENST00000626948 TRPM1Q7Z4N2 1603 aa19.62■□□□□ 0.73
SOX2-OT-241ENST00000626948 NBPF8Q3BBV2 869 aa19.62■□□□□ 0.73
SOX2-OT-241ENST00000626948 CCDC61Q9Y6R9 512 aa19.62■□□□□ 0.73
SOX2-OT-241ENST00000626948 NUTM2GQ5VZR2 741 aa19.61■□□□□ 0.73
SOX2-OT-241ENST00000626948 CABP2Q9NPB3 220 aa19.6■□□□□ 0.73
SOX2-OT-241ENST00000626948 KIAA0232Q92628 1395 aa19.59■□□□□ 0.73
SOX2-OT-241ENST00000626948 CENPJQ9HC77 1338 aaPredicted RBP19.59■□□□□ 0.73
SOX2-OT-241ENST00000626948 CCDC9Q9Y3X0 531 aaKnown RBP19.59■□□□□ 0.73
SOX2-OT-241ENST00000626948 NRKQ7Z2Y5 1582 aa19.58■□□□□ 0.73
SOX2-OT-241ENST00000626948 CHRNA2Q15822 529 aa19.58■□□□□ 0.72
SOX2-OT-241ENST00000626948 FAM98CQ17RN3 349 aaKnown RBP19.58■□□□□ 0.72
SOX2-OT-241ENST00000626948 THSD7AQ9UPZ6 1657 aa19.58■□□□□ 0.72
SOX2-OT-241ENST00000626948 BLMP54132 1417 aaPredicted RBP19.58■□□□□ 0.72
SOX2-OT-241ENST00000626948 SPATA31A5Q5VU36 1347 aa19.57■□□□□ 0.72
SOX2-OT-241ENST00000626948 SPATA31A7Q8IWB4 1347 aa19.57■□□□□ 0.72
SOX2-OT-241ENST00000626948 DEFB132Q7Z7B7 95 aa19.57■□□□□ 0.72
SOX2-OT-241ENST00000626948 CCDC125Q86Z20 511 aa19.57■□□□□ 0.72
SOX2-OT-241ENST00000626948 PPIP5K1Q6PFW1 1433 aa19.57■□□□□ 0.72
SOX2-OT-241ENST00000626948 KRT27Q7Z3Y8 459 aa19.56■□□□□ 0.72
SOX2-OT-241ENST00000626948 ZC3H6P61129 1189 aaKnown RBP19.55■□□□□ 0.72
SOX2-OT-241ENST00000626948 NEUROD1Q13562 356 aa19.55■□□□□ 0.72
SOX2-OT-241ENST00000626948 PRDM11Q9NQV5 511 aa19.55■□□□□ 0.72
SOX2-OT-241ENST00000626948 LMO7Q8WWI1 1683 aa19.55■□□□□ 0.72
SOX2-OT-241ENST00000626948 USP19O94966 1318 aa19.54■□□□□ 0.72
SOX2-OT-241ENST00000626948 SRPK2P78362 688 aaKnown RBP19.54■□□□□ 0.72
SOX2-OT-241ENST00000626948 FAM182BQ5T319 152 aa19.54■□□□□ 0.72
SOX2-OT-241ENST00000626948 CAMTA1Q9Y6Y1 1673 aa19.54■□□□□ 0.72
SOX2-OT-241ENST00000626948 SSH2Q76I76 1423 aa19.52■□□□□ 0.72
SOX2-OT-241ENST00000626948 SPATA31A1Q5TZJ5 1347 aa19.51■□□□□ 0.71
SOX2-OT-241ENST00000626948 ABTB2Q8N961 1025 aa19.51■□□□□ 0.71
SOX2-OT-241ENST00000626948 CABP1Q9NZU7 370 aa19.51■□□□□ 0.71
SOX2-OT-241ENST00000626948 USP6P35125 1406 aa19.5■□□□□ 0.71
SOX2-OT-241ENST00000626948 PIK3C2AO00443 1686 aa19.49■□□□□ 0.71
SOX2-OT-241ENST00000626948 CPDO75976 1380 aa19.48■□□□□ 0.71
SOX2-OT-241ENST00000626948 STRN4Q9NRL3 753 aa19.48■□□□□ 0.71
SOX2-OT-241ENST00000626948 ROCK2O75116 1388 aaKnown RBP19.47■□□□□ 0.71
SOX2-OT-241ENST00000626948 A0A0G2JS52 829 aa19.47■□□□□ 0.71
SOX2-OT-241ENST00000626948 GCP02774 474 aa19.47■□□□□ 0.71
SOX2-OT-241ENST00000626948 MYT1Q01538 1121 aa19.47■□□□□ 0.71
SOX2-OT-241ENST00000626948 ZRANB1Q9UGI0 708 aa19.47■□□□□ 0.71
SOX2-OT-241ENST00000626948 SLIT3O75094 1523 aa19.46■□□□□ 0.71
SOX2-OT-241ENST00000626948 TNS1Q9HBL0 1735 aaKnown RBP19.46■□□□□ 0.71
SOX2-OT-241ENST00000626948 LARP1Q6PKG0 1096 aaKnown RBP19.45■□□□□ 0.7
SOX2-OT-241ENST00000626948 COL18A1P39060 1754 aa19.44■□□□□ 0.7
SOX2-OT-241ENST00000626948 AKAP12Q02952 1782 aa19.44■□□□□ 0.7
SOX2-OT-241ENST00000626948 NLRP13Q86W25 1043 aa19.43■□□□□ 0.7
SOX2-OT-241ENST00000626948 EVC2Q86UK5 1308 aa19.43■□□□□ 0.7
SOX2-OT-241ENST00000626948 BRD4O60885 1362 aaPredicted RBP19.43■□□□□ 0.7
SOX2-OT-241ENST00000626948 RGPD1P0DJD0 1748 aa19.42■□□□□ 0.7
SOX2-OT-241ENST00000626948 COL5A2P05997 1499 aaPredicted RBP19.42■□□□□ 0.7
SOX2-OT-241ENST00000626948 USP35Q9P2H5 1018 aa19.42■□□□□ 0.7
SOX2-OT-241ENST00000626948 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
SOX2-OT-241ENST00000626948 NLRP6P59044 892 aa19.4■□□□□ 0.7
SOX2-OT-241ENST00000626948 EN1Q05925 392 aaPredicted RBP19.4■□□□□ 0.7
SOX2-OT-241ENST00000626948 BARGINQ6ZT62 677 aa19.4■□□□□ 0.7
SOX2-OT-241ENST00000626948 SF3B2Q13435 895 aaKnown RBP19.39■□□□□ 0.69
SOX2-OT-241ENST00000626948 CD163L1Q9NR16 1453 aa19.39■□□□□ 0.69
SOX2-OT-241ENST00000626948 DISP2A7MBM2 1401 aa19.38■□□□□ 0.69
SOX2-OT-241ENST00000626948 TTC21BQ7Z4L5 1316 aa19.38■□□□□ 0.69
SOX2-OT-241ENST00000626948 AXIN2Q9Y2T1 843 aa19.38■□□□□ 0.69
SOX2-OT-241ENST00000626948 MON2Q7Z3U7 1717 aa19.37■□□□□ 0.69
SOX2-OT-241ENST00000626948 SBNO2Q9Y2G9 1366 aa19.37■□□□□ 0.69
SOX2-OT-241ENST00000626948 EVA1CP58658 441 aa19.37■□□□□ 0.69
SOX2-OT-241ENST00000626948 RGPD5Q99666 1765 aa19.37■□□□□ 0.69
SOX2-OT-241ENST00000626948 PARP4Q9UKK3 1724 aaKnown RBP19.37■□□□□ 0.69
SOX2-OT-241ENST00000626948 AATKQ6ZMQ8 1374 aa19.36■□□□□ 0.69
SOX2-OT-241ENST00000626948 TCP11L2Q8N4U5 519 aa19.36■□□□□ 0.69
SOX2-OT-241ENST00000626948 BAG6P46379 1132 aa19.35■□□□□ 0.69
SOX2-OT-241ENST00000626948 NFAT5O94916 1531 aa19.35■□□□□ 0.69
SOX2-OT-241ENST00000626948 TRIM37O94972 964 aa19.34■□□□□ 0.69
SOX2-OT-241ENST00000626948 EZH2Q15910 746 aaKnown RBP19.34■□□□□ 0.69
SOX2-OT-241ENST00000626948 CARD11Q9BXL7 1154 aa19.34■□□□□ 0.69
SOX2-OT-241ENST00000626948 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
SOX2-OT-241ENST00000626948 CRB1P82279 1406 aa19.34■□□□□ 0.69
SOX2-OT-241ENST00000626948 ZBTB7CA1YPR0 619 aa19.33■□□□□ 0.68
SOX2-OT-241ENST00000626948 PSDA5PKW4 1024 aaPredicted RBP19.33■□□□□ 0.68
SOX2-OT-241ENST00000626948 ARHGEF25Q86VW2 580 aa19.33■□□□□ 0.68
SOX2-OT-241ENST00000626948 CAMKK2Q96RR4 588 aa19.33■□□□□ 0.68
SOX2-OT-241ENST00000626948 ZNF692Q9BU19 519 aaPredicted RBP19.33■□□□□ 0.68
SOX2-OT-241ENST00000626948 LRRC37A3O60309 1634 aa19.33■□□□□ 0.68
SOX2-OT-241ENST00000626948 FAM196AQ6ZSG2 479 aa19.32■□□□□ 0.68
SOX2-OT-241ENST00000626948 USP54Q70EL1 1684 aa19.31■□□□□ 0.68
SOX2-OT-241ENST00000626948 WNK3Q9BYP7 1800 aa19.31■□□□□ 0.68
SOX2-OT-241ENST00000626948 THRAP3Q9Y2W1 955 aaKnown RBP19.31■□□□□ 0.68
SOX2-OT-241ENST00000626948 KTN1Q86UP2 1357 aaKnown RBP19.31■□□□□ 0.68
SOX2-OT-241ENST00000626948 TONSLQ96HA7 1378 aa19.3■□□□□ 0.68
SOX2-OT-241ENST00000626948 RREB1Q92766 1687 aa19.3■□□□□ 0.68
SOX2-OT-241ENST00000626948 LRP5O75197 1615 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms