RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
TCF4-254ENST00000626584 A2ML1A8K2U0 1454 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 ATP7BP35670 1465 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 FYB1O15117 783 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 PANK1Q8TE04 598 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 STK26Q9P289 416 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 COG6Q9Y2V7 657 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 RIMBP3CA6NJZ7 1639 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 RIMBP3BA6NNM3 1639 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 RIMBP3Q9UFD9 1639 aa12.9□□□□□ -0.34
TCF4-254ENST00000626584 POGKQ9P215 609 aa12.89□□□□□ -0.35
TCF4-254ENST00000626584 FBXO31Q5XUX0 539 aaPredicted RBP12.88□□□□□ -0.35
TCF4-254ENST00000626584 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
TCF4-254ENST00000626584 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
TCF4-254ENST00000626584 TMPOP42166 694 aaKnown RBP12.88□□□□□ -0.35
TCF4-254ENST00000626584 RGS3P49796 1198 aa12.88□□□□□ -0.35
TCF4-254ENST00000626584 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
TCF4-254ENST00000626584 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
TCF4-254ENST00000626584 GGNBP2Q9H3C7 697 aa12.88□□□□□ -0.35
TCF4-254ENST00000626584 RIMS2Q9UQ26 1411 aa12.87□□□□□ -0.35
TCF4-254ENST00000626584 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
TCF4-254ENST00000626584 KNDC1Q76NI1 1749 aa12.87□□□□□ -0.35
TCF4-254ENST00000626584 NRXN3Q9Y4C0 1643 aa12.86□□□□□ -0.35
TCF4-254ENST00000626584 RLBP1P12271 317 aa12.86□□□□□ -0.35
TCF4-254ENST00000626584 FRAT1Q92837 279 aaPredicted RBP12.86□□□□□ -0.35
TCF4-254ENST00000626584 TRIM35Q9UPQ4 493 aa12.86□□□□□ -0.35
TCF4-254ENST00000626584 FAM69CQ0P6D2 419 aa12.85□□□□□ -0.35
TCF4-254ENST00000626584 MVPQ14764 893 aaKnown RBP12.85□□□□□ -0.35
TCF4-254ENST00000626584 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
TCF4-254ENST00000626584 TSPOAP1O95153 1857 aa12.84□□□□□ -0.35
TCF4-254ENST00000626584 DIAPH1O60610 1272 aaKnown RBP12.84□□□□□ -0.35
TCF4-254ENST00000626584 PCDHB15Q9Y5E8 787 aa12.84□□□□□ -0.35
TCF4-254ENST00000626584 RWDD1Q9H446 243 aaPredicted RBP12.83□□□□□ -0.36
TCF4-254ENST00000626584 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
TCF4-254ENST00000626584 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.36
TCF4-254ENST00000626584 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
TCF4-254ENST00000626584 TPRNQ4KMQ1 711 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 CYB5RLQ6IPT4 315 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
TCF4-254ENST00000626584 USP19O94966 1318 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 CPSF1Q10570 1443 aaKnown RBP12.82□□□□□ -0.36
TCF4-254ENST00000626584 FAM135BQ49AJ0 1406 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 FCHSD2O94868 740 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 NEFMP07197 916 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 PPIP5K1Q6PFW1 1433 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
TCF4-254ENST00000626584 SIRT1Q96EB6 747 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 CABP1Q9NZU7 370 aa12.82□□□□□ -0.36
TCF4-254ENST00000626584 MON2Q7Z3U7 1717 aa12.81□□□□□ -0.36
TCF4-254ENST00000626584 TECPR2O15040 1411 aa12.81□□□□□ -0.36
TCF4-254ENST00000626584 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
TCF4-254ENST00000626584 EXOSC9Q06265 439 aaKnown RBP12.81□□□□□ -0.36
TCF4-254ENST00000626584 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.81□□□□□ -0.36
TCF4-254ENST00000626584 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
TCF4-254ENST00000626584 CPS1P31327 1500 aa12.8□□□□□ -0.36
TCF4-254ENST00000626584 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
TCF4-254ENST00000626584 AKAP12Q02952 1782 aa12.8□□□□□ -0.36
TCF4-254ENST00000626584 AATKQ6ZMQ8 1374 aa12.8□□□□□ -0.36
TCF4-254ENST00000626584 RIPK4P57078 832 aa12.79□□□□□ -0.36
TCF4-254ENST00000626584 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
TCF4-254ENST00000626584 BCL2L13Q9BXK5 485 aa12.79□□□□□ -0.36
TCF4-254ENST00000626584 CDK12Q9NYV4 1490 aaPredicted RBP12.79□□□□□ -0.36
TCF4-254ENST00000626584 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
TCF4-254ENST00000626584 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
TCF4-254ENST00000626584 ALDH1L2Q3SY69 923 aa12.79□□□□□ -0.36
TCF4-254ENST00000626584 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
TCF4-254ENST00000626584 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
TCF4-254ENST00000626584 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
TCF4-254ENST00000626584 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
TCF4-254ENST00000626584 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
TCF4-254ENST00000626584 FTSJ3Q8IY81 847 aaKnown RBP12.78□□□□□ -0.36
TCF4-254ENST00000626584 SSH1Q8WYL5 1049 aa12.78□□□□□ -0.36
TCF4-254ENST00000626584 DDX19BQ9UMR2 479 aa12.78□□□□□ -0.36
TCF4-254ENST00000626584 KIF16BQ96L93 1317 aa12.77□□□□□ -0.36
TCF4-254ENST00000626584 WASLO00401 505 aaPredicted RBP12.77□□□□□ -0.36
TCF4-254ENST00000626584 C3P01024 1663 aa12.77□□□□□ -0.36
TCF4-254ENST00000626584 ITSN1Q15811 1721 aa12.77□□□□□ -0.37
TCF4-254ENST00000626584 TRIM27P14373 513 aa12.76□□□□□ -0.37
TCF4-254ENST00000626584 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
TCF4-254ENST00000626584 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
TCF4-254ENST00000626584 KIF13AQ9H1H9 1805 aa12.75□□□□□ -0.37
TCF4-254ENST00000626584 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
TCF4-254ENST00000626584 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
TCF4-254ENST00000626584 NFE2L2Q16236 605 aa12.75□□□□□ -0.37
TCF4-254ENST00000626584 METP08581 1390 aa12.75□□□□□ -0.37
TCF4-254ENST00000626584 SEC24BO95487 1268 aa12.74□□□□□ -0.37
TCF4-254ENST00000626584 HDGFP51858 240 aaKnown RBP12.74□□□□□ -0.37
TCF4-254ENST00000626584 CALD1Q05682 793 aaKnown RBP12.74□□□□□ -0.37
TCF4-254ENST00000626584 NOB1Q9ULX3 412 aaKnown RBP12.74□□□□□ -0.37
TCF4-254ENST00000626584 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
TCF4-254ENST00000626584 NRKQ7Z2Y5 1582 aa12.74□□□□□ -0.37
TCF4-254ENST00000626584 PRKAR2BP31323 418 aa12.74□□□□□ -0.37
TCF4-254ENST00000626584 IL13P35225 146 aa12.74□□□□□ -0.37
TCF4-254ENST00000626584 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
TCF4-254ENST00000626584 SENP3Q9H4L4 574 aaPredicted RBP12.74□□□□□ -0.37
TCF4-254ENST00000626584 BECN1Q14457 450 aa12.73□□□□□ -0.37
TCF4-254ENST00000626584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.73□□□□□ -0.37
TCF4-254ENST00000626584 TBC1D32Q96NH3 1257 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms