RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 ONECUT3O60422 494 aaPredicted RBP27.74■■■□□ 2.03
ATG4B-226ENST00000625810 TOPAZ1Q8N9V7 1692 aa27.73■■■□□ 2.03
ATG4B-226ENST00000625810 PAK3O75914 559 aaPredicted RBP27.73■■■□□ 2.03
ATG4B-226ENST00000625810 BLMP54132 1417 aaPredicted RBP27.73■■■□□ 2.03
ATG4B-226ENST00000625810 NBPF1Q3BBV0 1214 aa27.72■■■□□ 2.03
ATG4B-226ENST00000625810 CDK19Q9BWU1 502 aa27.72■■■□□ 2.03
ATG4B-226ENST00000625810 BTG4Q9NY30 223 aa27.72■■■□□ 2.03
ATG4B-226ENST00000625810 SRCAPQ6ZRS2 3230 aa27.7■■■□□ 2.03
ATG4B-226ENST00000625810 POLR3AO14802 1390 aaPredicted RBP27.68■■■□□ 2.02
ATG4B-226ENST00000625810 KRT27Q7Z3Y8 459 aa27.66■■■□□ 2.02
ATG4B-226ENST00000625810 ZRANB1Q9UGI0 708 aa27.66■■■□□ 2.02
ATG4B-226ENST00000625810 PHRF1Q9P1Y6 1649 aaKnown RBP27.66■■■□□ 2.02
ATG4B-226ENST00000625810 FAM98CQ17RN3 349 aaKnown RBP27.64■■■□□ 2.02
ATG4B-226ENST00000625810 L3MBTL2Q969R5 705 aa27.64■■■□□ 2.02
ATG4B-226ENST00000625810 CCDC61Q9Y6R9 512 aa27.64■■■□□ 2.02
ATG4B-226ENST00000625810 ACEP12821 1306 aa27.64■■■□□ 2.01
ATG4B-226ENST00000625810 SIN3AQ96ST3 1273 aa27.63■■■□□ 2.01
ATG4B-226ENST00000625810 PRDM11Q9NQV5 511 aa27.63■■■□□ 2.01
ATG4B-226ENST00000625810 PLEKHG3A1L390 1219 aa27.62■■■□□ 2.01
ATG4B-226ENST00000625810 SPATA31A5Q5VU36 1347 aa27.62■■■□□ 2.01
ATG4B-226ENST00000625810 SPATA31A7Q8IWB4 1347 aa27.62■■■□□ 2.01
ATG4B-226ENST00000625810 CENPJQ9HC77 1338 aaPredicted RBP27.62■■■□□ 2.01
ATG4B-226ENST00000625810 KIAA0232Q92628 1395 aa27.61■■■□□ 2.01
ATG4B-226ENST00000625810 A0A0G2JS52 829 aa27.61■■■□□ 2.01
ATG4B-226ENST00000625810 MYT1Q01538 1121 aa27.61■■■□□ 2.01
ATG4B-226ENST00000625810 NEUROD1Q13562 356 aa27.61■■■□□ 2.01
ATG4B-226ENST00000625810 NBPF8Q3BBV2 869 aa27.61■■■□□ 2.01
ATG4B-226ENST00000625810 DEFB132Q7Z7B7 95 aa27.61■■■□□ 2.01
ATG4B-226ENST00000625810 SRPK2P78362 688 aaKnown RBP27.59■■■□□ 2.01
ATG4B-226ENST00000625810 NUTM2GQ5VZR2 741 aa27.59■■■□□ 2.01
ATG4B-226ENST00000625810 THSD7AQ9UPZ6 1657 aa27.58■■■□□ 2.01
ATG4B-226ENST00000625810 SF3B2Q13435 895 aaKnown RBP27.57■■■□□ 2
ATG4B-226ENST00000625810 QRICH2Q9H0J4 1663 aa27.56■■■□□ 2
ATG4B-226ENST00000625810 CHRNA2Q15822 529 aa27.56■■■□□ 2
ATG4B-226ENST00000625810 PPIP5K1Q6PFW1 1433 aa27.56■■■□□ 2
ATG4B-226ENST00000625810 NRKQ7Z2Y5 1582 aa27.56■■■□□ 2
ATG4B-226ENST00000625810 ZC3H6P61129 1189 aaKnown RBP27.54■■■□□ 2
ATG4B-226ENST00000625810 CABP2Q9NPB3 220 aa27.54■■■□□ 2
ATG4B-226ENST00000625810 SPATA31A1Q5TZJ5 1347 aa27.52■■■□□ 2
ATG4B-226ENST00000625810 USP19O94966 1318 aa27.51■■□□□ 1.99
ATG4B-226ENST00000625810 ABTB2Q8N961 1025 aa27.51■■□□□ 1.99
ATG4B-226ENST00000625810 TRPM1Q7Z4N2 1603 aa27.5■■□□□ 1.99
ATG4B-226ENST00000625810 STRN4Q9NRL3 753 aa27.49■■□□□ 1.99
ATG4B-226ENST00000625810 FAM182BQ5T319 152 aa27.48■■□□□ 1.99
ATG4B-226ENST00000625810 CPDO75976 1380 aa27.48■■□□□ 1.99
ATG4B-226ENST00000625810 LMO7Q8WWI1 1683 aa27.47■■□□□ 1.99
ATG4B-226ENST00000625810 SSH2Q76I76 1423 aa27.47■■□□□ 1.99
ATG4B-226ENST00000625810 RGPD1P0DJD0 1748 aa27.47■■□□□ 1.99
ATG4B-226ENST00000625810 ROCK2O75116 1388 aaKnown RBP27.47■■□□□ 1.99
ATG4B-226ENST00000625810 CAMTA1Q9Y6Y1 1673 aa27.46■■□□□ 1.99
ATG4B-226ENST00000625810 BAG6P46379 1132 aa27.45■■□□□ 1.98
ATG4B-226ENST00000625810 BRD4O60885 1362 aaPredicted RBP27.45■■□□□ 1.98
ATG4B-226ENST00000625810 EVC2Q86UK5 1308 aa27.44■■□□□ 1.98
ATG4B-226ENST00000625810 USP6P35125 1406 aa27.44■■□□□ 1.98
ATG4B-226ENST00000625810 CABP1Q9NZU7 370 aa27.44■■□□□ 1.98
ATG4B-226ENST00000625810 NLRP13Q86W25 1043 aa27.43■■□□□ 1.98
ATG4B-226ENST00000625810 TNS1Q9HBL0 1735 aaKnown RBP27.41■■□□□ 1.98
ATG4B-226ENST00000625810 GCP02774 474 aa27.41■■□□□ 1.98
ATG4B-226ENST00000625810 EVA1CP58658 441 aa27.41■■□□□ 1.98
ATG4B-226ENST00000625810 LARP1Q6PKG0 1096 aaKnown RBP27.4■■□□□ 1.98
ATG4B-226ENST00000625810 USP35Q9P2H5 1018 aa27.4■■□□□ 1.98
ATG4B-226ENST00000625810 DISP2A7MBM2 1401 aa27.4■■□□□ 1.98
ATG4B-226ENST00000625810 BARGINQ6ZT62 677 aa27.39■■□□□ 1.98
ATG4B-226ENST00000625810 SLIT3O75094 1523 aa27.38■■□□□ 1.97
ATG4B-226ENST00000625810 EN1Q05925 392 aaPredicted RBP27.37■■□□□ 1.97
ATG4B-226ENST00000625810 COL5A2P05997 1499 aaPredicted RBP27.37■■□□□ 1.97
ATG4B-226ENST00000625810 PIK3C2AO00443 1686 aa27.36■■□□□ 1.97
ATG4B-226ENST00000625810 NLRP6P59044 892 aa27.35■■□□□ 1.97
ATG4B-226ENST00000625810 FAM196AQ6ZSG2 479 aa27.34■■□□□ 1.97
ATG4B-226ENST00000625810 TCP11L2Q8N4U5 519 aa27.34■■□□□ 1.97
ATG4B-226ENST00000625810 LRP5O75197 1615 aa27.33■■□□□ 1.97
ATG4B-226ENST00000625810 ZBTB7CA1YPR0 619 aa27.32■■□□□ 1.96
ATG4B-226ENST00000625810 PSDA5PKW4 1024 aaPredicted RBP27.32■■□□□ 1.96
ATG4B-226ENST00000625810 TONSLQ96HA7 1378 aa27.32■■□□□ 1.96
ATG4B-226ENST00000625810 TRIM37O94972 964 aa27.31■■□□□ 1.96
ATG4B-226ENST00000625810 ZNF692Q9BU19 519 aaPredicted RBP27.31■■□□□ 1.96
ATG4B-226ENST00000625810 CARD11Q9BXL7 1154 aa27.31■■□□□ 1.96
ATG4B-226ENST00000625810 THRAP3Q9Y2W1 955 aaKnown RBP27.3■■□□□ 1.96
ATG4B-226ENST00000625810 AATKQ6ZMQ8 1374 aa27.3■■□□□ 1.96
ATG4B-226ENST00000625810 AKAP12Q02952 1782 aa27.3■■□□□ 1.96
ATG4B-226ENST00000625810 PDE3BQ13370 1112 aa27.29■■□□□ 1.96
ATG4B-226ENST00000625810 PARP4Q9UKK3 1724 aaKnown RBP27.28■■□□□ 1.96
ATG4B-226ENST00000625810 CRB1P82279 1406 aa27.28■■□□□ 1.96
ATG4B-226ENST00000625810 EZH2Q15910 746 aaKnown RBP27.27■■□□□ 1.96
ATG4B-226ENST00000625810 COL18A1P39060 1754 aa27.27■■□□□ 1.96
ATG4B-226ENST00000625810 TTC21BQ7Z4L5 1316 aa27.26■■□□□ 1.95
ATG4B-226ENST00000625810 CAMKK2Q96RR4 588 aa27.26■■□□□ 1.95
ATG4B-226ENST00000625810 CPSF1Q10570 1443 aaKnown RBP27.25■■□□□ 1.95
ATG4B-226ENST00000625810 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
ATG4B-226ENST00000625810 SBNO2Q9Y2G9 1366 aa27.23■■□□□ 1.95
ATG4B-226ENST00000625810 APBA3O96018 575 aa27.23■■□□□ 1.95
ATG4B-226ENST00000625810 PARD3Q8TEW0 1356 aa27.22■■□□□ 1.95
ATG4B-226ENST00000625810 TTC21AQ8NDW8 1320 aa27.21■■□□□ 1.95
ATG4B-226ENST00000625810 R3HDM1Q15032 1099 aaKnown RBP27.21■■□□□ 1.95
ATG4B-226ENST00000625810 KTN1Q86UP2 1357 aaKnown RBP27.21■■□□□ 1.95
ATG4B-226ENST00000625810 LRRC37A3O60309 1634 aa27.2■■□□□ 1.95
ATG4B-226ENST00000625810 AXIN2Q9Y2T1 843 aa27.2■■□□□ 1.94
ATG4B-226ENST00000625810 RREB1Q92766 1687 aa27.2■■□□□ 1.94
ATG4B-226ENST00000625810 MON2Q7Z3U7 1717 aa27.19■■□□□ 1.94
ATG4B-226ENST00000625810 ARHGEF25Q86VW2 580 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms