RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 SALL2Q9Y467 1007 aaPredicted RBP15.54■□□□□ 0.08
CCDC163-201ENST00000625766 RUNDC1Q96C34 613 aa15.53■□□□□ 0.08
CCDC163-201ENST00000625766 TTC21AQ8NDW8 1320 aa15.53■□□□□ 0.08
CCDC163-201ENST00000625766 KIF20BQ96Q89 1820 aa15.53■□□□□ 0.08
CCDC163-201ENST00000625766 APAF1O14727 1248 aa15.53■□□□□ 0.08
CCDC163-201ENST00000625766 FKBP8Q14318 412 aa15.53■□□□□ 0.08
CCDC163-201ENST00000625766 ERICH6BQ5W0A0 696 aa15.52■□□□□ 0.08
CCDC163-201ENST00000625766 NGDNQ8NEJ9 315 aaKnown RBP15.52■□□□□ 0.08
CCDC163-201ENST00000625766 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.08
CCDC163-201ENST00000625766 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.08
CCDC163-201ENST00000625766 CCDC146Q8IYE0 955 aa15.52■□□□□ 0.07
CCDC163-201ENST00000625766 PMFBP1Q8TBY8 1022 aa15.52■□□□□ 0.07
CCDC163-201ENST00000625766 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.07
CCDC163-201ENST00000625766 SHPRHQ149N8 1683 aa15.51■□□□□ 0.07
CCDC163-201ENST00000625766 COL3A1P02461 1466 aaPredicted RBP15.51■□□□□ 0.07
CCDC163-201ENST00000625766 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
CCDC163-201ENST00000625766 DIAPH1O60610 1272 aaKnown RBP15.51■□□□□ 0.07
CCDC163-201ENST00000625766 CDCA7LQ96GN5 454 aa15.5■□□□□ 0.07
CCDC163-201ENST00000625766 ITSN1Q15811 1721 aa15.5■□□□□ 0.07
CCDC163-201ENST00000625766 NWD1Q149M9 1564 aa15.5■□□□□ 0.07
CCDC163-201ENST00000625766 USP31Q70CQ4 1352 aa15.49■□□□□ 0.07
CCDC163-201ENST00000625766 U2AF1L5P0DN76 240 aaPredicted RBP15.49■□□□□ 0.07
CCDC163-201ENST00000625766 U2AF1Q01081 240 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCDC163-201ENST00000625766 GOLGA2Q08379 1002 aa15.49■□□□□ 0.07
CCDC163-201ENST00000625766 FMN2Q9NZ56 1722 aa15.49■□□□□ 0.07
CCDC163-201ENST00000625766 PROSER2Q86WR7 435 aaPredicted RBP15.48■□□□□ 0.07
CCDC163-201ENST00000625766 TRMT2AQ8IZ69 625 aaKnown RBP15.48■□□□□ 0.07
CCDC163-201ENST00000625766 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
CCDC163-201ENST00000625766 PNNQ9H307 717 aaKnown RBP15.48■□□□□ 0.07
CCDC163-201ENST00000625766 FBLN1P23142 703 aa15.48■□□□□ 0.07
CCDC163-201ENST00000625766 CCDC27Q2M243 656 aa15.48■□□□□ 0.07
CCDC163-201ENST00000625766 TCP11L2Q8N4U5 519 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 PLEKHF1Q96S99 279 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 PHF8Q9UPP1 1060 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 OVOS2A0A0J9YW53 1432 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 OVOS2Q6IE36 1432 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 NCOA3Q9Y6Q9 1424 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 NRKQ7Z2Y5 1582 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 FCHSD2O94868 740 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 SLFN5Q08AF3 891 aa15.47■□□□□ 0.07
CCDC163-201ENST00000625766 RBM33Q96EV2 1170 aaKnown RBP15.46■□□□□ 0.07
CCDC163-201ENST00000625766 EMILIN1Q9Y6C2 1016 aa15.46■□□□□ 0.07
CCDC163-201ENST00000625766 HSPA2P54652 639 aa15.45■□□□□ 0.06
CCDC163-201ENST00000625766 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
CCDC163-201ENST00000625766 IL13P35225 146 aa15.45■□□□□ 0.06
CCDC163-201ENST00000625766 WWC1Q8IX03 1113 aa15.45■□□□□ 0.06
CCDC163-201ENST00000625766 NALCNQ8IZF0 1738 aa15.45■□□□□ 0.06
CCDC163-201ENST00000625766 RGPD8O14715 1765 aaPredicted RBP15.44■□□□□ 0.06
CCDC163-201ENST00000625766 U2SURPO15042 1029 aaKnown RBP15.44■□□□□ 0.06
CCDC163-201ENST00000625766 MAP2P11137 1827 aaKnown RBP15.44■□□□□ 0.06
CCDC163-201ENST00000625766 WDR63Q8IWG1 891 aa15.44■□□□□ 0.06
CCDC163-201ENST00000625766 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
CCDC163-201ENST00000625766 CDK12Q9NYV4 1490 aaPredicted RBP15.44■□□□□ 0.06
CCDC163-201ENST00000625766 E9PSI1 815 aa15.43■□□□□ 0.06
CCDC163-201ENST00000625766 PPM1GO15355 546 aaPredicted RBP15.43■□□□□ 0.06
CCDC163-201ENST00000625766 C14orf37Q86TY3 774 aa15.43■□□□□ 0.06
CCDC163-201ENST00000625766 LMTK3Q96Q04 1460 aa15.42■□□□□ 0.06
CCDC163-201ENST00000625766 RRS1Q15050 365 aaKnown RBP15.42■□□□□ 0.06
CCDC163-201ENST00000625766 ESCO1Q5FWF5 840 aa15.42■□□□□ 0.06
CCDC163-201ENST00000625766 IQSEC2Q5JU85 1478 aa15.41■□□□□ 0.06
CCDC163-201ENST00000625766 NLRP6P59044 892 aa15.4■□□□□ 0.06
CCDC163-201ENST00000625766 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
CCDC163-201ENST00000625766 TMPOP42166 694 aaKnown RBP15.39■□□□□ 0.05
CCDC163-201ENST00000625766 PSME1Q06323 249 aa15.39■□□□□ 0.05
CCDC163-201ENST00000625766 RSPH6AQ9H0K4 717 aa15.39■□□□□ 0.05
CCDC163-201ENST00000625766 ABTB2Q8N961 1025 aa15.39■□□□□ 0.05
CCDC163-201ENST00000625766 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
CCDC163-201ENST00000625766 ORAI2Q96SN7 254 aa15.38■□□□□ 0.05
CCDC163-201ENST00000625766 DCCP43146 1447 aa15.38■□□□□ 0.05
CCDC163-201ENST00000625766 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
CCDC163-201ENST00000625766 KIF24Q5T7B8 1368 aa15.37■□□□□ 0.05
CCDC163-201ENST00000625766 NEUROD2Q15784 382 aa15.37■□□□□ 0.05
CCDC163-201ENST00000625766 DMRT2Q9Y5R5 561 aa15.37■□□□□ 0.05
CCDC163-201ENST00000625766 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
CCDC163-201ENST00000625766 ATF3P18847 181 aa15.36■□□□□ 0.05
CCDC163-201ENST00000625766 MAP3K19Q56UN5 1328 aa15.36■□□□□ 0.05
CCDC163-201ENST00000625766 C1orf167Q5SNV9 1468 aa15.36■□□□□ 0.05
CCDC163-201ENST00000625766 RRP1P56182 461 aaKnown RBP15.36■□□□□ 0.05
CCDC163-201ENST00000625766 IRX6P78412 446 aaPredicted RBP15.36■□□□□ 0.05
CCDC163-201ENST00000625766 EIF4A2Q14240 407 aaKnown RBP15.36■□□□□ 0.05
CCDC163-201ENST00000625766 LRRC7Q96NW7 1537 aa15.36■□□□□ 0.05
CCDC163-201ENST00000625766 TRIM35Q9UPQ4 493 aa15.36■□□□□ 0.05
CCDC163-201ENST00000625766 SBNO1A3KN83 1393 aa15.35■□□□□ 0.05
CCDC163-201ENST00000625766 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
CCDC163-201ENST00000625766 NEFMP07197 916 aa15.35■□□□□ 0.05
CCDC163-201ENST00000625766 PRKAR2BP31323 418 aa15.35■□□□□ 0.05
CCDC163-201ENST00000625766 CADPS2Q86UW7 1296 aa15.35■□□□□ 0.05
CCDC163-201ENST00000625766 PPP4R2Q9NY27 417 aa15.35■□□□□ 0.05
CCDC163-201ENST00000625766 FOXO3O43524 673 aa15.34■□□□□ 0.05
CCDC163-201ENST00000625766 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
CCDC163-201ENST00000625766 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
CCDC163-201ENST00000625766 USP54Q70EL1 1684 aa15.34■□□□□ 0.05
CCDC163-201ENST00000625766 STRCQ7RTU9 1775 aa15.34■□□□□ 0.05
CCDC163-201ENST00000625766 IL16Q14005 1332 aa15.34■□□□□ 0.05
CCDC163-201ENST00000625766 RIPK4P57078 832 aa15.34■□□□□ 0.05
CCDC163-201ENST00000625766 STRCP1A6NGW2 1772 aa15.33■□□□□ 0.04
CCDC163-201ENST00000625766 FLT4P35916 1363 aa15.33■□□□□ 0.04
CCDC163-201ENST00000625766 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
CCDC163-201ENST00000625766 HMOX1P09601 288 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms