RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ADGRL3Q9HAR2 1447 aa23.21■■□□□ 1.31
PCF11-207ENST00000624931 KIF20BQ96Q89 1820 aa23.21■■□□□ 1.31
PCF11-207ENST00000624931 TCERG1O14776 1098 aaKnown RBP23.2■■□□□ 1.3
PCF11-207ENST00000624931 DEKP35659 375 aaKnown RBP23.19■■□□□ 1.3
PCF11-207ENST00000624931 ZBTB47Q9UFB7 747 aaPredicted RBP23.18■■□□□ 1.3
PCF11-207ENST00000624931 ANKRD26Q9UPS8 1709 aa23.17■■□□□ 1.3
PCF11-207ENST00000624931 TNNT2P45379 298 aaPredicted RBP23.17■■□□□ 1.3
PCF11-207ENST00000624931 RRP1P56182 461 aaKnown RBP23.17■■□□□ 1.3
PCF11-207ENST00000624931 MORC1Q86VD1 984 aa23.17■■□□□ 1.3
PCF11-207ENST00000624931 PROSER2Q86WR7 435 aaPredicted RBP23.17■■□□□ 1.3
PCF11-207ENST00000624931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.17■■□□□ 1.3
PCF11-207ENST00000624931 GGNBP2Q9H3C7 697 aa23.17■■□□□ 1.3
PCF11-207ENST00000624931 C14orf37Q86TY3 774 aa23.16■■□□□ 1.3
PCF11-207ENST00000624931 NRKQ7Z2Y5 1582 aa23.16■■□□□ 1.3
PCF11-207ENST00000624931 MS4A1P11836 297 aa23.15■■□□□ 1.3
PCF11-207ENST00000624931 PMFBP1Q8TBY8 1022 aa23.15■■□□□ 1.3
PCF11-207ENST00000624931 ANKARQ7Z5J8 1434 aa23.15■■□□□ 1.3
PCF11-207ENST00000624931 NSD2O96028 1365 aa23.15■■□□□ 1.3
PCF11-207ENST00000624931 ACEP12821 1306 aa23.14■■□□□ 1.3
PCF11-207ENST00000624931 EDC4Q6P2E9 1401 aaKnown RBP23.14■■□□□ 1.29
PCF11-207ENST00000624931 FYB1O15117 783 aa23.13■■□□□ 1.29
PCF11-207ENST00000624931 PLEKHG3A1L390 1219 aa23.13■■□□□ 1.29
PCF11-207ENST00000624931 RCAN3Q9UKA8 241 aa23.13■■□□□ 1.29
PCF11-207ENST00000624931 TMEM94Q12767 1356 aa23.11■■□□□ 1.29
PCF11-207ENST00000624931 NME9Q86XW9 330 aa23.11■■□□□ 1.29
PCF11-207ENST00000624931 ZRANB1Q9UGI0 708 aa23.1■■□□□ 1.29
PCF11-207ENST00000624931 ZNF335Q9H4Z2 1342 aaPredicted RBP23.09■■□□□ 1.29
PCF11-207ENST00000624931 USP6P35125 1406 aa23.09■■□□□ 1.29
PCF11-207ENST00000624931 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
PCF11-207ENST00000624931 XIRP1Q702N8 1843 aaKnown RBP23.08■■□□□ 1.29
PCF11-207ENST00000624931 PAK3O75914 559 aaPredicted RBP23.08■■□□□ 1.28
PCF11-207ENST00000624931 POLR3AO14802 1390 aaPredicted RBP23.07■■□□□ 1.28
PCF11-207ENST00000624931 SENP3-EIF4A1A0A087X0R7 540 aa23.07■■□□□ 1.28
PCF11-207ENST00000624931 NGDNQ8NEJ9 315 aaKnown RBP23.05■■□□□ 1.28
PCF11-207ENST00000624931 ZNF692Q9BU19 519 aaPredicted RBP23.05■■□□□ 1.28
PCF11-207ENST00000624931 TTC21BQ7Z4L5 1316 aa23.04■■□□□ 1.28
PCF11-207ENST00000624931 SSH2Q76I76 1423 aa23.03■■□□□ 1.28
PCF11-207ENST00000624931 FBLN1P23142 703 aa23.02■■□□□ 1.28
PCF11-207ENST00000624931 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
PCF11-207ENST00000624931 PHF8Q9UPP1 1060 aa23.02■■□□□ 1.28
PCF11-207ENST00000624931 LRRC7Q96NW7 1537 aa23.01■■□□□ 1.27
PCF11-207ENST00000624931 ESCO1Q5FWF5 840 aa23.01■■□□□ 1.27
PCF11-207ENST00000624931 BLMP54132 1417 aaPredicted RBP23.01■■□□□ 1.27
PCF11-207ENST00000624931 SHPRHQ149N8 1683 aa23.01■■□□□ 1.27
PCF11-207ENST00000624931 MTHFSP49914 203 aa23■■□□□ 1.27
PCF11-207ENST00000624931 ORAI2Q96SN7 254 aa23■■□□□ 1.27
PCF11-207ENST00000624931 C19orf44Q9H6X5 657 aa23■■□□□ 1.27
PCF11-207ENST00000624931 EXOC6Q8TAG9 804 aa22.99■■□□□ 1.27
PCF11-207ENST00000624931 PIK3C2AO00443 1686 aa22.99■■□□□ 1.27
PCF11-207ENST00000624931 C1orf167Q5SNV9 1468 aa22.99■■□□□ 1.27
PCF11-207ENST00000624931 NBR1Q14596 966 aa22.98■■□□□ 1.27
PCF11-207ENST00000624931 MST1RQ04912 1400 aa22.97■■□□□ 1.27
PCF11-207ENST00000624931 OVOS2A0A0J9YW53 1432 aa22.97■■□□□ 1.27
PCF11-207ENST00000624931 OVOS2Q6IE36 1432 aa22.97■■□□□ 1.27
PCF11-207ENST00000624931 NCOA3Q9Y6Q9 1424 aa22.97■■□□□ 1.27
PCF11-207ENST00000624931 PDE4AP27815 886 aa22.96■■□□□ 1.27
PCF11-207ENST00000624931 BACH2Q9BYV9 841 aa22.96■■□□□ 1.27
PCF11-207ENST00000624931 COG3Q96JB2 828 aa22.96■■□□□ 1.27
PCF11-207ENST00000624931 ADAMTS8Q9UP79 889 aa22.96■■□□□ 1.27
PCF11-207ENST00000624931 DCCP43146 1447 aa22.95■■□□□ 1.26
PCF11-207ENST00000624931 ATF3P18847 181 aa22.94■■□□□ 1.26
PCF11-207ENST00000624931 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.262e-6■□□□□ 10.4
PCF11-207ENST00000624931 DDRGK1Q96HY6 314 aa22.94■■□□□ 1.26
PCF11-207ENST00000624931 MSH6P52701 1360 aa22.94■■□□□ 1.26
PCF11-207ENST00000624931 COL3A1P02461 1466 aaPredicted RBP22.94■■□□□ 1.26
PCF11-207ENST00000624931 MARF1Q9Y4F3 1742 aaKnown RBP22.93■■□□□ 1.26
PCF11-207ENST00000624931 MAP2P11137 1827 aaKnown RBP22.93■■□□□ 1.26
PCF11-207ENST00000624931 PPM1GO15355 546 aaPredicted RBP22.93■■□□□ 1.26
PCF11-207ENST00000624931 TTC21AQ8NDW8 1320 aa22.92■■□□□ 1.26
PCF11-207ENST00000624931 KIF1AQ12756 1690 aa22.92■■□□□ 1.26
PCF11-207ENST00000624931 XPCQ01831 940 aaPredicted RBP22.92■■□□□ 1.26
PCF11-207ENST00000624931 NUTM2GQ5VZR2 741 aa22.91■■□□□ 1.26
PCF11-207ENST00000624931 POLKQ9UBT6 870 aa22.91■■□□□ 1.26
PCF11-207ENST00000624931 DMRT2Q9Y5R5 561 aa22.91■■□□□ 1.26
PCF11-207ENST00000624931 EMILIN1Q9Y6C2 1016 aa22.91■■□□□ 1.26
PCF11-207ENST00000624931 FOXO3O43524 673 aa22.9■■□□□ 1.26
PCF11-207ENST00000624931 SOX12O15370 315 aa22.89■■□□□ 1.26
PCF11-207ENST00000624931 RRS1Q15050 365 aaKnown RBP22.89■■□□□ 1.26
PCF11-207ENST00000624931 CFAP53Q96M91 514 aa22.89■■□□□ 1.26
PCF11-207ENST00000624931 CADPS2Q86UW7 1296 aa22.88■■□□□ 1.25
PCF11-207ENST00000624931 CCDC146Q8IYE0 955 aa22.88■■□□□ 1.25
PCF11-207ENST00000624931 PSME1Q06323 249 aa22.87■■□□□ 1.25
PCF11-207ENST00000624931 TRPM3Q9HCF6 1732 aaPredicted RBP22.87■■□□□ 1.25
PCF11-207ENST00000624931 USP54Q70EL1 1684 aa22.86■■□□□ 1.25
PCF11-207ENST00000624931 AATKQ6ZMQ8 1374 aa22.86■■□□□ 1.25
PCF11-207ENST00000624931 USP31Q70CQ4 1352 aa22.86■■□□□ 1.25
PCF11-207ENST00000624931 DDX17Q92841 729 aaKnown RBP22.86■■□□□ 1.25
PCF11-207ENST00000624931 SALL2Q9Y467 1007 aaPredicted RBP22.85■■□□□ 1.25
PCF11-207ENST00000624931 PEAK1Q9H792 1746 aa22.85■■□□□ 1.25
PCF11-207ENST00000624931 NLRP6P59044 892 aa22.84■■□□□ 1.25
PCF11-207ENST00000624931 ABTB2Q8N961 1025 aa22.84■■□□□ 1.25
PCF11-207ENST00000624931 PNPLA6Q8IY17 1366 aa22.84■■□□□ 1.25
PCF11-207ENST00000624931 CDK12Q9NYV4 1490 aaPredicted RBP22.83■■□□□ 1.25
PCF11-207ENST00000624931 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.81■■□□□ 1.24
PCF11-207ENST00000624931 KRT28Q7Z3Y7 464 aa22.8■■□□□ 1.24
PCF11-207ENST00000624931 CDCA7LQ96GN5 454 aa22.8■■□□□ 1.24
PCF11-207ENST00000624931 LTBP4Q8N2S1 1624 aa22.8■■□□□ 1.24
PCF11-207ENST00000624931 U2SURPO15042 1029 aaKnown RBP22.79■■□□□ 1.24
PCF11-207ENST00000624931 PLEKHG5O94827 1062 aa22.79■■□□□ 1.24
PCF11-207ENST00000624931 DIAPH1O60610 1272 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms