RNA–Protein interactions for RNA: ENST00000624930.1

SMG6-IT1-201, SMG6 intronic transcript 1, humanhuman

BASIC

Gene SMG6-IT1, Length 374 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-IT1-201ENST00000624930 NPHP4O75161 1426 aaPredicted RBP12.97□□□□□ -0.33
SMG6-IT1-201ENST00000624930 APAF1O14727 1248 aa12.97□□□□□ -0.33
SMG6-IT1-201ENST00000624930 KCNA6P17658 529 aa12.97□□□□□ -0.33
SMG6-IT1-201ENST00000624930 WDR63Q8IWG1 891 aa12.97□□□□□ -0.33
SMG6-IT1-201ENST00000624930 RCAN3Q9UKA8 241 aa12.97□□□□□ -0.33
SMG6-IT1-201ENST00000624930 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
SMG6-IT1-201ENST00000624930 AKAP12Q02952 1782 aa12.97□□□□□ -0.33
SMG6-IT1-201ENST00000624930 ACEP12821 1306 aa12.96□□□□□ -0.33
SMG6-IT1-201ENST00000624930 TTC21BQ7Z4L5 1316 aa12.96□□□□□ -0.33
SMG6-IT1-201ENST00000624930 E9PSI1 815 aa12.96□□□□□ -0.33
SMG6-IT1-201ENST00000624930 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.33
SMG6-IT1-201ENST00000624930 DUSP27Q5VZP5 1158 aa12.96□□□□□ -0.33
SMG6-IT1-201ENST00000624930 COG3Q96JB2 828 aa12.96□□□□□ -0.33
SMG6-IT1-201ENST00000624930 POLKQ9UBT6 870 aa12.96□□□□□ -0.33
SMG6-IT1-201ENST00000624930 USP6P35125 1406 aa12.96□□□□□ -0.34
SMG6-IT1-201ENST00000624930 USP31Q70CQ4 1352 aa12.95□□□□□ -0.34
SMG6-IT1-201ENST00000624930 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
SMG6-IT1-201ENST00000624930 FCHSD2O94868 740 aa12.95□□□□□ -0.34
SMG6-IT1-201ENST00000624930 CDCA7LQ96GN5 454 aa12.95□□□□□ -0.34
SMG6-IT1-201ENST00000624930 IQSEC2Q5JU85 1478 aa12.95□□□□□ -0.34
SMG6-IT1-201ENST00000624930 PLPPR3Q6T4P5 718 aa12.94□□□□□ -0.34
SMG6-IT1-201ENST00000624930 WWC1Q8IX03 1113 aa12.94□□□□□ -0.34
SMG6-IT1-201ENST00000624930 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
SMG6-IT1-201ENST00000624930 CHD2O14647 1828 aaKnown RBP12.94□□□□□ -0.34
SMG6-IT1-201ENST00000624930 CDK12Q9NYV4 1490 aaPredicted RBP12.93□□□□□ -0.34
SMG6-IT1-201ENST00000624930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMG6-IT1-201ENST00000624930 TCP11L2Q8N4U5 519 aa12.93□□□□□ -0.34
SMG6-IT1-201ENST00000624930 NRKQ7Z2Y5 1582 aa12.93□□□□□ -0.34
SMG6-IT1-201ENST00000624930 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
SMG6-IT1-201ENST00000624930 U2AF1L5P0DN76 240 aaPredicted RBP12.92□□□□□ -0.34
SMG6-IT1-201ENST00000624930 RRP1P56182 461 aaKnown RBP12.92□□□□□ -0.34
SMG6-IT1-201ENST00000624930 U2AF1Q01081 240 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMG6-IT1-201ENST00000624930 ITSN1Q15811 1721 aa12.92□□□□□ -0.34
SMG6-IT1-201ENST00000624930 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
SMG6-IT1-201ENST00000624930 NME9Q86XW9 330 aa12.92□□□□□ -0.34
SMG6-IT1-201ENST00000624930 CCDC146Q8IYE0 955 aa12.92□□□□□ -0.34
SMG6-IT1-201ENST00000624930 NCOA3Q9Y6Q9 1424 aa12.92□□□□□ -0.34
SMG6-IT1-201ENST00000624930 NCKAP5LQ9HCH0 1330 aa12.91□□□□□ -0.34
SMG6-IT1-201ENST00000624930 NWD1Q149M9 1564 aa12.91□□□□□ -0.34
SMG6-IT1-201ENST00000624930 SALL2Q9Y467 1007 aaPredicted RBP12.91□□□□□ -0.34
SMG6-IT1-201ENST00000624930 NKTRP30414 1462 aaKnown RBP12.91□□□□□ -0.34
SMG6-IT1-201ENST00000624930 IL16Q14005 1332 aa12.9□□□□□ -0.34
SMG6-IT1-201ENST00000624930 ADGRL3Q9HAR2 1447 aa12.9□□□□□ -0.34
SMG6-IT1-201ENST00000624930 LRRC7Q96NW7 1537 aa12.9□□□□□ -0.34
SMG6-IT1-201ENST00000624930 KIF24Q5T7B8 1368 aa12.9□□□□□ -0.34
SMG6-IT1-201ENST00000624930 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
SMG6-IT1-201ENST00000624930 IL13P35225 146 aa12.89□□□□□ -0.35
SMG6-IT1-201ENST00000624930 CT47B1P0C2W7 299 aaPredicted RBP12.88□□□□□ -0.35
SMG6-IT1-201ENST00000624930 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.87□□□□□ -0.35
SMG6-IT1-201ENST00000624930 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
SMG6-IT1-201ENST00000624930 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
SMG6-IT1-201ENST00000624930 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
SMG6-IT1-201ENST00000624930 MYH16Q9H6N6 1097 aa12.86□□□□□ -0.35
SMG6-IT1-201ENST00000624930 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
SMG6-IT1-201ENST00000624930 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
SMG6-IT1-201ENST00000624930 NALCNQ8IZF0 1738 aa12.85□□□□□ -0.35
SMG6-IT1-201ENST00000624930 U2SURPO15042 1029 aaKnown RBP12.85□□□□□ -0.35
SMG6-IT1-201ENST00000624930 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
SMG6-IT1-201ENST00000624930 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
SMG6-IT1-201ENST00000624930 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
SMG6-IT1-201ENST00000624930 NEFMP07197 916 aa12.84□□□□□ -0.35
SMG6-IT1-201ENST00000624930 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
SMG6-IT1-201ENST00000624930 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
SMG6-IT1-201ENST00000624930 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
SMG6-IT1-201ENST00000624930 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
SMG6-IT1-201ENST00000624930 DCCP43146 1447 aa12.82□□□□□ -0.36
SMG6-IT1-201ENST00000624930 MST1RQ04912 1400 aa12.82□□□□□ -0.36
SMG6-IT1-201ENST00000624930 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
SMG6-IT1-201ENST00000624930 PMFBP1Q8TBY8 1022 aa12.82□□□□□ -0.36
SMG6-IT1-201ENST00000624930 C19orf44Q9H6X5 657 aa12.82□□□□□ -0.36
SMG6-IT1-201ENST00000624930 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
SMG6-IT1-201ENST00000624930 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
SMG6-IT1-201ENST00000624930 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
SMG6-IT1-201ENST00000624930 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
SMG6-IT1-201ENST00000624930 FLT4P35916 1363 aa12.81□□□□□ -0.36
SMG6-IT1-201ENST00000624930 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
SMG6-IT1-201ENST00000624930 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
SMG6-IT1-201ENST00000624930 RIPK4P57078 832 aa12.8□□□□□ -0.36
SMG6-IT1-201ENST00000624930 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
SMG6-IT1-201ENST00000624930 AAMPQ13685 434 aa12.8□□□□□ -0.36
SMG6-IT1-201ENST00000624930 PDE3AQ14432 1141 aa12.8□□□□□ -0.36
SMG6-IT1-201ENST00000624930 PROSER2Q86WR7 435 aaPredicted RBP12.8□□□□□ -0.36
SMG6-IT1-201ENST00000624930 ZNF428Q96B54 188 aa12.8□□□□□ -0.36
SMG6-IT1-201ENST00000624930 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
SMG6-IT1-201ENST00000624930 FBLN1P23142 703 aa12.79□□□□□ -0.36
SMG6-IT1-201ENST00000624930 EIF4A2Q14240 407 aaKnown RBP12.79□□□□□ -0.36
SMG6-IT1-201ENST00000624930 RRS1Q15050 365 aaKnown RBP12.79□□□□□ -0.36
SMG6-IT1-201ENST00000624930 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
SMG6-IT1-201ENST00000624930 NLRP6P59044 892 aa12.78□□□□□ -0.36
SMG6-IT1-201ENST00000624930 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
SMG6-IT1-201ENST00000624930 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
SMG6-IT1-201ENST00000624930 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
SMG6-IT1-201ENST00000624930 ARHGEF10O15013 1369 aa12.78□□□□□ -0.36
SMG6-IT1-201ENST00000624930 KCNH5Q8NCM2 988 aa12.77□□□□□ -0.37
SMG6-IT1-201ENST00000624930 CCDC136Q96JN2 1154 aa12.77□□□□□ -0.37
SMG6-IT1-201ENST00000624930 PIK3C2AO00443 1686 aa12.77□□□□□ -0.37
SMG6-IT1-201ENST00000624930 KDM4FA0A1W2PPD8 638 aa12.76□□□□□ -0.37
SMG6-IT1-201ENST00000624930 RARSP54136 660 aaKnown RBP12.76□□□□□ -0.37
SMG6-IT1-201ENST00000624930 ABTB2Q8N961 1025 aa12.76□□□□□ -0.37
SMG6-IT1-201ENST00000624930 EXOC6Q8TAG9 804 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms