RNA–Protein interactions for RNA: ENST00000624843.3

ARHGEF9-218, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF9, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-218ENST00000624843 CDK19Q9BWU1 502 aa16.22■□□□□ 0.19
ARHGEF9-218ENST00000624843 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
ARHGEF9-218ENST00000624843 STAG3Q9UJ98 1225 aa16.22■□□□□ 0.19
ARHGEF9-218ENST00000624843 SPATA31D1Q6ZQQ2 1576 aa16.22■□□□□ 0.19
ARHGEF9-218ENST00000624843 FAM69CQ0P6D2 419 aa16.21■□□□□ 0.19
ARHGEF9-218ENST00000624843 A2ML1A8K2U0 1454 aa16.2■□□□□ 0.18
ARHGEF9-218ENST00000624843 U2SURPO15042 1029 aaKnown RBP16.2■□□□□ 0.18
ARHGEF9-218ENST00000624843 RLBP1P12271 317 aa16.2■□□□□ 0.18
ARHGEF9-218ENST00000624843 SETD1AO15047 1707 aaKnown RBP16.2■□□□□ 0.18
ARHGEF9-218ENST00000624843 ATP7BP35670 1465 aa16.19■□□□□ 0.18
ARHGEF9-218ENST00000624843 CDC42BPGQ6DT37 1551 aa16.19■□□□□ 0.18
ARHGEF9-218ENST00000624843 DAXXQ9UER7 740 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF9-218ENST00000624843 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
ARHGEF9-218ENST00000624843 DIAPH1O60610 1272 aaKnown RBP16.19■□□□□ 0.18
ARHGEF9-218ENST00000624843 NEFMP07197 916 aa16.19■□□□□ 0.18
ARHGEF9-218ENST00000624843 ZKSCAN2Q63HK3 967 aa16.19■□□□□ 0.18
ARHGEF9-218ENST00000624843 TRIM35Q9UPQ4 493 aa16.19■□□□□ 0.18
ARHGEF9-218ENST00000624843 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
ARHGEF9-218ENST00000624843 BCL2L13Q9BXK5 485 aa16.18■□□□□ 0.18
ARHGEF9-218ENST00000624843 CABP1Q9NZU7 370 aa16.18■□□□□ 0.18
ARHGEF9-218ENST00000624843 PCDHB15Q9Y5E8 787 aa16.18■□□□□ 0.18
ARHGEF9-218ENST00000624843 RWDD1Q9H446 243 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF9-218ENST00000624843 TSPOAP1O95153 1857 aa16.17■□□□□ 0.18
ARHGEF9-218ENST00000624843 RIMS2Q9UQ26 1411 aa16.17■□□□□ 0.18
ARHGEF9-218ENST00000624843 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF9-218ENST00000624843 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
ARHGEF9-218ENST00000624843 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
ARHGEF9-218ENST00000624843 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
ARHGEF9-218ENST00000624843 FCHSD2O94868 740 aa16.16■□□□□ 0.18
ARHGEF9-218ENST00000624843 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
ARHGEF9-218ENST00000624843 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
ARHGEF9-218ENST00000624843 EXOSC9Q06265 439 aaKnown RBP16.14■□□□□ 0.17
ARHGEF9-218ENST00000624843 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
ARHGEF9-218ENST00000624843 RIPK4P57078 832 aa16.14■□□□□ 0.17
ARHGEF9-218ENST00000624843 FTSJ3Q8IY81 847 aaKnown RBP16.14■□□□□ 0.17
ARHGEF9-218ENST00000624843 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
ARHGEF9-218ENST00000624843 USP19O94966 1318 aa16.12■□□□□ 0.17
ARHGEF9-218ENST00000624843 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.12■□□□□ 0.17
ARHGEF9-218ENST00000624843 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
ARHGEF9-218ENST00000624843 SSH1Q8WYL5 1049 aa16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 CPSF1Q10570 1443 aaKnown RBP16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 FAM135BQ49AJ0 1406 aa16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 NRXN3Q9Y4C0 1643 aa16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 EDC4Q6P2E9 1401 aaKnown RBP16.11■□□□□ 0.17
ARHGEF9-218ENST00000624843 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
ARHGEF9-218ENST00000624843 TRIM27P14373 513 aa16.1■□□□□ 0.17
ARHGEF9-218ENST00000624843 KIF16BQ96L93 1317 aa16.1■□□□□ 0.17
ARHGEF9-218ENST00000624843 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
ARHGEF9-218ENST00000624843 ZNF428Q96B54 188 aa16.1■□□□□ 0.17
ARHGEF9-218ENST00000624843 KNDC1Q76NI1 1749 aa16.1■□□□□ 0.17
ARHGEF9-218ENST00000624843 HDAC1Q13547 482 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF9-218ENST00000624843 ALDH1L2Q3SY69 923 aa16.09■□□□□ 0.17
ARHGEF9-218ENST00000624843 SIRT1Q96EB6 747 aa16.09■□□□□ 0.17
ARHGEF9-218ENST00000624843 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
ARHGEF9-218ENST00000624843 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
ARHGEF9-218ENST00000624843 WASLO00401 505 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF9-218ENST00000624843 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
ARHGEF9-218ENST00000624843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.08■□□□□ 0.16
ARHGEF9-218ENST00000624843 BRPF1P55201 1214 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF9-218ENST00000624843 NFKBIBQ15653 356 aa16.07■□□□□ 0.16
ARHGEF9-218ENST00000624843 AATKQ6ZMQ8 1374 aa16.07■□□□□ 0.16
ARHGEF9-218ENST00000624843 TECPR2O15040 1411 aa16.07■□□□□ 0.16
ARHGEF9-218ENST00000624843 HDGFP51858 240 aaKnown RBP16.07■□□□□ 0.16
ARHGEF9-218ENST00000624843 NOB1Q9ULX3 412 aaKnown RBP16.07■□□□□ 0.16
ARHGEF9-218ENST00000624843 CDK12Q9NYV4 1490 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF9-218ENST00000624843 SEC24BO95487 1268 aa16.06■□□□□ 0.16
ARHGEF9-218ENST00000624843 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
ARHGEF9-218ENST00000624843 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
ARHGEF9-218ENST00000624843 UPF2Q9HAU5 1272 aaKnown RBP16.06■□□□□ 0.16
ARHGEF9-218ENST00000624843 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
ARHGEF9-218ENST00000624843 METP08581 1390 aa16.05■□□□□ 0.16
ARHGEF9-218ENST00000624843 BECN1Q14457 450 aa16.04■□□□□ 0.16
ARHGEF9-218ENST00000624843 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
ARHGEF9-218ENST00000624843 ITPRIPQ8IWB1 547 aa16.04■□□□□ 0.16
ARHGEF9-218ENST00000624843 CPS1P31327 1500 aa16.04■□□□□ 0.16
ARHGEF9-218ENST00000624843 MLECQ14165 292 aa16.03■□□□□ 0.16
ARHGEF9-218ENST00000624843 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
ARHGEF9-218ENST00000624843 IL13P35225 146 aa16.03■□□□□ 0.16
ARHGEF9-218ENST00000624843 SMC5Q8IY18 1101 aa16.03■□□□□ 0.16
ARHGEF9-218ENST00000624843 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
ARHGEF9-218ENST00000624843 AKAP12Q02952 1782 aa16.03■□□□□ 0.16
ARHGEF9-218ENST00000624843 TMEM57Q8N5G2 664 aa16.02■□□□□ 0.16
ARHGEF9-218ENST00000624843 NUDT16Q96DE0 195 aaKnown RBP16.02■□□□□ 0.16
ARHGEF9-218ENST00000624843 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.16
ARHGEF9-218ENST00000624843 ESF1Q9H501 851 aaKnown RBP16.02■□□□□ 0.16
ARHGEF9-218ENST00000624843 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
ARHGEF9-218ENST00000624843 C3P01024 1663 aa16.01■□□□□ 0.15
ARHGEF9-218ENST00000624843 ITSN1Q15811 1721 aa16.01■□□□□ 0.15
ARHGEF9-218ENST00000624843 FBLN1P23142 703 aa16■□□□□ 0.15
ARHGEF9-218ENST00000624843 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
ARHGEF9-218ENST00000624843 ARHGAP45Q92619 1136 aa16■□□□□ 0.15
ARHGEF9-218ENST00000624843 COG3Q96JB2 828 aa16■□□□□ 0.15
ARHGEF9-218ENST00000624843 IFT57Q9NWB7 429 aa16■□□□□ 0.15
ARHGEF9-218ENST00000624843 EMILIN1Q9Y6C2 1016 aa16■□□□□ 0.15
ARHGEF9-218ENST00000624843 GNAI1P63096 354 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms