RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 LMTK3Q96Q04 1460 aa9.45□□□□□ -0.9
CBWD3-219ENST00000622817 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
CBWD3-219ENST00000622817 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
CBWD3-219ENST00000622817 PPP2R1AP30153 589 aa9.44□□□□□ -0.9
CBWD3-219ENST00000622817 PRR36Q9H6K5 1346 aa9.44□□□□□ -0.9
CBWD3-219ENST00000622817 NWD1Q149M9 1564 aa9.44□□□□□ -0.9
CBWD3-219ENST00000622817 MORC1Q86VD1 984 aa9.43□□□□□ -0.9
CBWD3-219ENST00000622817 FAM9BQ8IZU0 186 aa9.43□□□□□ -0.9
CBWD3-219ENST00000622817 CPSF1Q10570 1443 aaKnown RBP9.43□□□□□ -0.9
CBWD3-219ENST00000622817 PLEKHG3A1L390 1219 aa9.42□□□□□ -0.9
CBWD3-219ENST00000622817 PNISRQ8TF01 805 aaKnown RBP9.42□□□□□ -0.9
CBWD3-219ENST00000622817 ANKARQ7Z5J8 1434 aa9.42□□□□□ -0.9
CBWD3-219ENST00000622817 CDC42BPGQ6DT37 1551 aa9.42□□□□□ -0.9
CBWD3-219ENST00000622817 NKTRP30414 1462 aaKnown RBP9.42□□□□□ -0.9
CBWD3-219ENST00000622817 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
CBWD3-219ENST00000622817 ADGRL3Q9HAR2 1447 aa9.41□□□□□ -0.9
CBWD3-219ENST00000622817 PROSER2Q86WR7 435 aaPredicted RBP9.41□□□□□ -0.9
CBWD3-219ENST00000622817 TOPAZ1Q8N9V7 1692 aa9.41□□□□□ -0.9
CBWD3-219ENST00000622817 NUTM2FA1L443 756 aa9.4□□□□□ -0.9
CBWD3-219ENST00000622817 FYB1O15117 783 aa9.4□□□□□ -0.9
CBWD3-219ENST00000622817 C14orf37Q86TY3 774 aa9.4□□□□□ -0.9
CBWD3-219ENST00000622817 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
CBWD3-219ENST00000622817 ITSN1Q15811 1721 aa9.39□□□□□ -0.91
CBWD3-219ENST00000622817 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
CBWD3-219ENST00000622817 HNRNPUQ00839 825 aaKnown RBP eCLIP9.39□□□□□ -0.91
CBWD3-219ENST00000622817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.39□□□□□ -0.91
CBWD3-219ENST00000622817 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
CBWD3-219ENST00000622817 ACEP12821 1306 aa9.39□□□□□ -0.91
CBWD3-219ENST00000622817 NALCNQ8IZF0 1738 aa9.39□□□□□ -0.91
CBWD3-219ENST00000622817 FKBP8Q14318 412 aa9.38□□□□□ -0.91
CBWD3-219ENST00000622817 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
CBWD3-219ENST00000622817 AKAP12Q02952 1782 aa9.38□□□□□ -0.91
CBWD3-219ENST00000622817 STRCQ7RTU9 1775 aa9.38□□□□□ -0.91
CBWD3-219ENST00000622817 NCOA3Q9Y6Q9 1424 aa9.38□□□□□ -0.91
CBWD3-219ENST00000622817 MON2Q7Z3U7 1717 aa9.38□□□□□ -0.91
CBWD3-219ENST00000622817 RBM33Q96EV2 1170 aaKnown RBP9.38□□□□□ -0.91
CBWD3-219ENST00000622817 C19orf44Q9H6X5 657 aa9.38□□□□□ -0.91
CBWD3-219ENST00000622817 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
CBWD3-219ENST00000622817 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
CBWD3-219ENST00000622817 NGDNQ8NEJ9 315 aaKnown RBP9.37□□□□□ -0.91
CBWD3-219ENST00000622817 INSRP06213 1382 aa9.37□□□□□ -0.91
CBWD3-219ENST00000622817 USP6P35125 1406 aa9.37□□□□□ -0.91
CBWD3-219ENST00000622817 ANKRD26Q9UPS8 1709 aa9.37□□□□□ -0.91
CBWD3-219ENST00000622817 KIF20BQ96Q89 1820 aa9.37□□□□□ -0.91
CBWD3-219ENST00000622817 TTC21BQ7Z4L5 1316 aa9.36□□□□□ -0.91
CBWD3-219ENST00000622817 PMFBP1Q8TBY8 1022 aa9.36□□□□□ -0.91
CBWD3-219ENST00000622817 TMEM94Q12767 1356 aa9.36□□□□□ -0.91
CBWD3-219ENST00000622817 TTC21AQ8NDW8 1320 aa9.36□□□□□ -0.91
CBWD3-219ENST00000622817 WDR43Q15061 677 aaKnown RBP eCLIP9.36□□□□□ -0.91
CBWD3-219ENST00000622817 NME9Q86XW9 330 aa9.36□□□□□ -0.91
CBWD3-219ENST00000622817 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
CBWD3-219ENST00000622817 MTHFSP49914 203 aa9.35□□□□□ -0.91
CBWD3-219ENST00000622817 COG3Q96JB2 828 aa9.35□□□□□ -0.91
CBWD3-219ENST00000622817 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
CBWD3-219ENST00000622817 DCCP43146 1447 aa9.35□□□□□ -0.91
CBWD3-219ENST00000622817 SSH2Q76I76 1423 aa9.35□□□□□ -0.91
CBWD3-219ENST00000622817 STRCP1A6NGW2 1772 aa9.34□□□□□ -0.91
CBWD3-219ENST00000622817 RGPD8O14715 1765 aaPredicted RBP9.34□□□□□ -0.91
CBWD3-219ENST00000622817 SPDYE4A6NLX3 237 aa9.34□□□□□ -0.91
CBWD3-219ENST00000622817 ATF3P18847 181 aa9.34□□□□□ -0.91
CBWD3-219ENST00000622817 ZBED9Q6R2W3 1325 aa9.34□□□□□ -0.91
CBWD3-219ENST00000622817 ESCO1Q5FWF5 840 aa9.34□□□□□ -0.91
CBWD3-219ENST00000622817 NRKQ7Z2Y5 1582 aa9.34□□□□□ -0.91
CBWD3-219ENST00000622817 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
CBWD3-219ENST00000622817 CADPS2Q86UW7 1296 aa9.32□□□□□ -0.92
CBWD3-219ENST00000622817 BLMP54132 1417 aaPredicted RBP9.32□□□□□ -0.92
CBWD3-219ENST00000622817 MSH6P52701 1360 aa9.32□□□□□ -0.92
CBWD3-219ENST00000622817 AATKQ6ZMQ8 1374 aa9.32□□□□□ -0.92
CBWD3-219ENST00000622817 ZNF335Q9H4Z2 1342 aaPredicted RBP9.32□□□□□ -0.92
CBWD3-219ENST00000622817 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
CBWD3-219ENST00000622817 C1orf167Q5SNV9 1468 aa9.31□□□□□ -0.92
CBWD3-219ENST00000622817 PSME1Q06323 249 aa9.31□□□□□ -0.92
CBWD3-219ENST00000622817 USP31Q70CQ4 1352 aa9.31□□□□□ -0.92
CBWD3-219ENST00000622817 LRRC7Q96NW7 1537 aa9.31□□□□□ -0.92
CBWD3-219ENST00000622817 OVOS2A0A0J9YW53 1432 aa9.3□□□□□ -0.92
CBWD3-219ENST00000622817 OVOS2Q6IE36 1432 aa9.3□□□□□ -0.92
CBWD3-219ENST00000622817 PRKAR2AP13861 404 aaKnown RBP9.3□□□□□ -0.92
CBWD3-219ENST00000622817 ORAI2Q96SN7 254 aa9.3□□□□□ -0.92
CBWD3-219ENST00000622817 POLKQ9UBT6 870 aa9.3□□□□□ -0.92
CBWD3-219ENST00000622817 NUDCQ9Y266 331 aa9.3□□□□□ -0.92
CBWD3-219ENST00000622817 PNPLA6Q8IY17 1366 aa9.3□□□□□ -0.92
CBWD3-219ENST00000622817 MST1RQ04912 1400 aa9.3□□□□□ -0.92
CBWD3-219ENST00000622817 SMG6Q86US8 1419 aaKnown RBP9.29□□□□□ -0.92
CBWD3-219ENST00000622817 PAK3O75914 559 aaPredicted RBP9.29□□□□□ -0.92
CBWD3-219ENST00000622817 KIF1AQ12756 1690 aa9.29□□□□□ -0.92
CBWD3-219ENST00000622817 FOXO3O43524 673 aa9.28□□□□□ -0.92
CBWD3-219ENST00000622817 DIAPH1O60610 1272 aaKnown RBP9.28□□□□□ -0.92
CBWD3-219ENST00000622817 NLRP6P59044 892 aa9.28□□□□□ -0.92
CBWD3-219ENST00000622817 ABTB2Q8N961 1025 aa9.28□□□□□ -0.92
CBWD3-219ENST00000622817 SHPRHQ149N8 1683 aa9.28□□□□□ -0.92
CBWD3-219ENST00000622817 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
CBWD3-219ENST00000622817 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
CBWD3-219ENST00000622817 PPM1GO15355 546 aaPredicted RBP9.28□□□□□ -0.92
CBWD3-219ENST00000622817 PRR29P0C7W0 189 aa9.28□□□□□ -0.92
CBWD3-219ENST00000622817 FBLN1P23142 703 aa9.28□□□□□ -0.92
CBWD3-219ENST00000622817 EMILIN1Q9Y6C2 1016 aa9.28□□□□□ -0.92
CBWD3-219ENST00000622817 XIRP1Q702N8 1843 aaKnown RBP9.27□□□□□ -0.92
CBWD3-219ENST00000622817 PIK3C2AO00443 1686 aa9.27□□□□□ -0.93
CBWD3-219ENST00000622817 MAP2P11137 1827 aaKnown RBP9.27□□□□□ -0.93
CBWD3-219ENST00000622817 U2AF1L5P0DN76 240 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms