RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 AK7Q96M32 723 aa11.44□□□□□ -0.58
HDAC9-229ENST00000622668 ZPR1O75312 459 aa11.44□□□□□ -0.58
HDAC9-229ENST00000622668 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
HDAC9-229ENST00000622668 STARD3NLO95772 234 aa11.43□□□□□ -0.58
HDAC9-229ENST00000622668 B4GALNT3Q6L9W6 998 aa11.43□□□□□ -0.58
HDAC9-229ENST00000622668 NPATQ14207 1427 aa11.43□□□□□ -0.58
HDAC9-229ENST00000622668 DISP3Q9P2K9 1392 aa11.43□□□□□ -0.58
HDAC9-229ENST00000622668 CFAP74Q9C0B2 1584 aa11.43□□□□□ -0.58
HDAC9-229ENST00000622668 HMMRO75330 724 aa11.43□□□□□ -0.58
HDAC9-229ENST00000622668 BTBD11A6QL63 1104 aa11.43□□□□□ -0.58
HDAC9-229ENST00000622668 HDGFL1Q5TGJ6 251 aa11.43□□□□□ -0.58
HDAC9-229ENST00000622668 QTRT2Q9H974 415 aaKnown RBP11.43□□□□□ -0.58
HDAC9-229ENST00000622668 TULP1O00294 542 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-229ENST00000622668 PLIN1O60240 522 aa11.43□□□□□ -0.58
HDAC9-229ENST00000622668 RCAN3Q9UKA8 241 aa11.42□□□□□ -0.58
HDAC9-229ENST00000622668 SHANK2Q9UPX8 1470 aa11.42□□□□□ -0.58
HDAC9-229ENST00000622668 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
HDAC9-229ENST00000622668 ADAMTS8Q9UP79 889 aa11.42□□□□□ -0.58
HDAC9-229ENST00000622668 TTC37Q6PGP7 1564 aa11.41□□□□□ -0.58
HDAC9-229ENST00000622668 HSP90AB2PQ58FF8 381 aa11.41□□□□□ -0.58
HDAC9-229ENST00000622668 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
HDAC9-229ENST00000622668 AMOTQ4VCS5 1084 aa11.41□□□□□ -0.58
HDAC9-229ENST00000622668 ZNF219Q9P2Y4 722 aaPredicted RBP11.41□□□□□ -0.58
HDAC9-229ENST00000622668 PPIP5K1Q6PFW1 1433 aa11.41□□□□□ -0.58
HDAC9-229ENST00000622668 IFNL2Q8IZJ0 200 aa11.4□□□□□ -0.58
HDAC9-229ENST00000622668 MYO5CQ9NQX4 1742 aa11.4□□□□□ -0.58
HDAC9-229ENST00000622668 SCAF11Q99590 1463 aaKnown RBP11.4□□□□□ -0.58
HDAC9-229ENST00000622668 TTC21AQ8NDW8 1320 aa11.4□□□□□ -0.58
HDAC9-229ENST00000622668 RXRBP28702 533 aa11.4□□□□□ -0.58
HDAC9-229ENST00000622668 UGGT1Q9NYU2 1555 aa11.4□□□□□ -0.58
HDAC9-229ENST00000622668 TFCP2L1Q9NZI6 479 aa11.4□□□□□ -0.59
HDAC9-229ENST00000622668 YTHDC2Q9H6S0 1430 aaKnown RBP11.39□□□□□ -0.59
HDAC9-229ENST00000622668 E9PSI1 815 aa11.39□□□□□ -0.59
HDAC9-229ENST00000622668 IL2RBP14784 551 aa11.39□□□□□ -0.59
HDAC9-229ENST00000622668 BAG6P46379 1132 aa11.39□□□□□ -0.59
HDAC9-229ENST00000622668 ADCY10Q96PN6 1610 aa11.39□□□□□ -0.59
HDAC9-229ENST00000622668 GNAT3A8MTJ3 354 aa11.39□□□□□ -0.59
HDAC9-229ENST00000622668 PNISRQ8TF01 805 aaKnown RBP11.39□□□□□ -0.59
HDAC9-229ENST00000622668 HSP90B1P14625 803 aaKnown RBP11.39□□□□□ -0.59
HDAC9-229ENST00000622668 TOMM22Q9NS69 142 aa11.39□□□□□ -0.59
HDAC9-229ENST00000622668 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
HDAC9-229ENST00000622668 MBD5Q9P267 1494 aa11.38□□□□□ -0.59
HDAC9-229ENST00000622668 ZNF772Q68DY9 489 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-229ENST00000622668 ANP32AP39687 249 aaKnown RBP11.38□□□□□ -0.59
HDAC9-229ENST00000622668 TCOF1Q13428 1488 aaKnown RBP11.38□□□□□ -0.59
HDAC9-229ENST00000622668 MCM10Q7L590 875 aa11.38□□□□□ -0.59
HDAC9-229ENST00000622668 TRPC5Q9UL62 973 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-229ENST00000622668 KDM4FA0A1W2PPD8 638 aa11.37□□□□□ -0.59
HDAC9-229ENST00000622668 DCTN1Q14203 1278 aa11.37□□□□□ -0.59
HDAC9-229ENST00000622668 CCDC30Q5VVM6 783 aa11.37□□□□□ -0.59
HDAC9-229ENST00000622668 GPATCH3Q96I76 525 aa11.37□□□□□ -0.59
HDAC9-229ENST00000622668 NOL10Q9BSC4 688 aaKnown RBP11.37□□□□□ -0.59
HDAC9-229ENST00000622668 RFC4P35249 363 aa11.37□□□□□ -0.59
HDAC9-229ENST00000622668 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
HDAC9-229ENST00000622668 APBA3O96018 575 aa11.36□□□□□ -0.59
HDAC9-229ENST00000622668 RPRD2Q5VT52 1461 aaKnown RBP11.36□□□□□ -0.59
HDAC9-229ENST00000622668 TRIM6-TRIM34B2RNG4 842 aa11.36□□□□□ -0.59
HDAC9-229ENST00000622668 TRIM34Q9BYJ4 488 aa11.36□□□□□ -0.59
HDAC9-229ENST00000622668 ZNF652Q9Y2D9 606 aa11.36□□□□□ -0.59
HDAC9-229ENST00000622668 RAD21O60216 631 aa11.35□□□□□ -0.59
HDAC9-229ENST00000622668 POLD1P28340 1107 aa11.35□□□□□ -0.59
HDAC9-229ENST00000622668 CCDC85AQ96PX6 553 aaPredicted RBP11.35□□□□□ -0.59
HDAC9-229ENST00000622668 FCHSD2O94868 740 aa11.35□□□□□ -0.59
HDAC9-229ENST00000622668 FYB1O15117 783 aa11.35□□□□□ -0.59
HDAC9-229ENST00000622668 ZKSCAN2Q63HK3 967 aa11.35□□□□□ -0.59
HDAC9-229ENST00000622668 API5Q9BZZ5 524 aaKnown RBP11.35□□□□□ -0.59
HDAC9-229ENST00000622668 SAMD9LQ8IVG5 1584 aa11.35□□□□□ -0.59
HDAC9-229ENST00000622668 KIAA1211Q6ZU35 1233 aa11.35□□□□□ -0.59
HDAC9-229ENST00000622668 HECW2Q9P2P5 1572 aa11.35□□□□□ -0.59
HDAC9-229ENST00000622668 ABCC1P33527 1531 aa11.34□□□□□ -0.59
HDAC9-229ENST00000622668 NEUROD6Q96NK8 337 aa11.34□□□□□ -0.59
HDAC9-229ENST00000622668 STK32BQ9NY57 414 aa11.34□□□□□ -0.59
HDAC9-229ENST00000622668 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
HDAC9-229ENST00000622668 ARHGEF10O15013 1369 aa11.34□□□□□ -0.59
HDAC9-229ENST00000622668 G3BP1Q13283 466 aaKnown RBP eCLIP11.33□□□□□ -0.6
HDAC9-229ENST00000622668 TWISTNBQ3B726 338 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-229ENST00000622668 TSR2Q969E8 191 aaKnown RBP11.33□□□□□ -0.6
HDAC9-229ENST00000622668 EFCAB6Q5THR3 1501 aa11.33□□□□□ -0.6
HDAC9-229ENST00000622668 NLRP1Q9C000 1473 aa11.33□□□□□ -0.6
HDAC9-229ENST00000622668 HSPA1LP34931 641 aa11.33□□□□□ -0.6
HDAC9-229ENST00000622668 DDRGK1Q96HY6 314 aa11.33□□□□□ -0.6
HDAC9-229ENST00000622668 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
HDAC9-229ENST00000622668 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
HDAC9-229ENST00000622668 FAM182BQ5T319 152 aa11.32□□□□□ -0.6
HDAC9-229ENST00000622668 SMARCC1Q92922 1105 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-229ENST00000622668 TRPM2O94759 1503 aa11.32□□□□□ -0.6
HDAC9-229ENST00000622668 ARHGEF12Q9NZN5 1544 aa11.32□□□□□ -0.6
HDAC9-229ENST00000622668 METP08581 1390 aa11.32□□□□□ -0.6
HDAC9-229ENST00000622668 MPHOSPH8Q99549 860 aa11.32□□□□□ -0.6
HDAC9-229ENST00000622668 RWDD1Q9H446 243 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-229ENST00000622668 PLEKHG1Q9ULL1 1385 aa11.32□□□□□ -0.6
HDAC9-229ENST00000622668 ZNF622Q969S3 477 aaKnown RBP eCLIP11.32□□□□□ -0.6
HDAC9-229ENST00000622668 CNNM1Q9NRU3 951 aa11.32□□□□□ -0.6
HDAC9-229ENST00000622668 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-229ENST00000622668 FMNL2Q96PY5 1086 aa11.31□□□□□ -0.6
HDAC9-229ENST00000622668 KDM5DQ9BY66 1539 aa11.31□□□□□ -0.6
HDAC9-229ENST00000622668 EXOSC9Q06265 439 aaKnown RBP11.31□□□□□ -0.6
HDAC9-229ENST00000622668 UBTFL1P0CB47 393 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-229ENST00000622668 GPTP24298 496 aa11.31□□□□□ -0.6
HDAC9-229ENST00000622668 NFE2L2Q16236 605 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms