RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 USP32Q8NFA0 1604 aa16.99■□□□□ 0.31
AGAP3-226ENST00000622464 NSD2O96028 1365 aa16.99■□□□□ 0.31
AGAP3-226ENST00000622464 DIAPH1O60610 1272 aaKnown RBP16.99■□□□□ 0.31
AGAP3-226ENST00000622464 THUMPD2Q9BTF0 503 aaKnown RBP16.99■□□□□ 0.31
AGAP3-226ENST00000622464 POLKQ9UBT6 870 aa16.99■□□□□ 0.31
AGAP3-226ENST00000622464 IQSEC2Q5JU85 1478 aa16.98■□□□□ 0.31
AGAP3-226ENST00000622464 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
AGAP3-226ENST00000622464 RGS3P49796 1198 aa16.98■□□□□ 0.31
AGAP3-226ENST00000622464 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
AGAP3-226ENST00000622464 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
AGAP3-226ENST00000622464 PMFBP1Q8TBY8 1022 aa16.97■□□□□ 0.31
AGAP3-226ENST00000622464 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
AGAP3-226ENST00000622464 PLEKHF1Q96S99 279 aa16.96■□□□□ 0.31
AGAP3-226ENST00000622464 NINLQ9Y2I6 1382 aa16.96■□□□□ 0.31
AGAP3-226ENST00000622464 RLBP1P12271 317 aa16.96■□□□□ 0.31
AGAP3-226ENST00000622464 PRKAR2BP31323 418 aa16.96■□□□□ 0.31
AGAP3-226ENST00000622464 RIPK4P57078 832 aa16.96■□□□□ 0.31
AGAP3-226ENST00000622464 ANO8Q9HCE9 1232 aaPredicted RBP16.95■□□□□ 0.3
AGAP3-226ENST00000622464 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
AGAP3-226ENST00000622464 TRIM35Q9UPQ4 493 aa16.95■□□□□ 0.3
AGAP3-226ENST00000622464 RARSP54136 660 aaKnown RBP16.94■□□□□ 0.3
AGAP3-226ENST00000622464 PHACTR3Q96KR7 559 aa16.94■□□□□ 0.3
AGAP3-226ENST00000622464 CCDC61Q9Y6R9 512 aa16.94■□□□□ 0.3
AGAP3-226ENST00000622464 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
AGAP3-226ENST00000622464 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
AGAP3-226ENST00000622464 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
AGAP3-226ENST00000622464 CPS1P31327 1500 aa16.93■□□□□ 0.3
AGAP3-226ENST00000622464 UBR1Q8IWV7 1749 aa16.93■□□□□ 0.3
AGAP3-226ENST00000622464 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
AGAP3-226ENST00000622464 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
AGAP3-226ENST00000622464 PDE4AP27815 886 aa16.93■□□□□ 0.3
AGAP3-226ENST00000622464 DEKP35659 375 aaKnown RBP16.93■□□□□ 0.3
AGAP3-226ENST00000622464 HDGFP51858 240 aaKnown RBP16.93■□□□□ 0.3
AGAP3-226ENST00000622464 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
AGAP3-226ENST00000622464 TCERG1O14776 1098 aaKnown RBP16.92■□□□□ 0.3
AGAP3-226ENST00000622464 IGHDP01880 384 aa16.92■□□□□ 0.3
AGAP3-226ENST00000622464 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
AGAP3-226ENST00000622464 PTPRUQ92729 1446 aa16.91■□□□□ 0.3
AGAP3-226ENST00000622464 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
AGAP3-226ENST00000622464 EID1Q9Y6B2 187 aa16.9■□□□□ 0.3
AGAP3-226ENST00000622464 DLC1Q96QB1 1528 aa16.9■□□□□ 0.3
AGAP3-226ENST00000622464 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
AGAP3-226ENST00000622464 NUTM2GQ5VZR2 741 aa16.9■□□□□ 0.3
AGAP3-226ENST00000622464 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
AGAP3-226ENST00000622464 COG3Q96JB2 828 aa16.9■□□□□ 0.3
AGAP3-226ENST00000622464 ACEP12821 1306 aa16.89■□□□□ 0.29
AGAP3-226ENST00000622464 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
AGAP3-226ENST00000622464 DCTN1Q14203 1278 aa16.88■□□□□ 0.29
AGAP3-226ENST00000622464 FAM83GA6ND36 823 aa16.87■□□□□ 0.29
AGAP3-226ENST00000622464 AEBP1Q8IUX7 1158 aa16.87■□□□□ 0.29
AGAP3-226ENST00000622464 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
AGAP3-226ENST00000622464 MAP2P11137 1827 aaKnown RBP16.87■□□□□ 0.29
AGAP3-226ENST00000622464 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
AGAP3-226ENST00000622464 ATP7BP35670 1465 aa16.87■□□□□ 0.29
AGAP3-226ENST00000622464 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
AGAP3-226ENST00000622464 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
AGAP3-226ENST00000622464 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
AGAP3-226ENST00000622464 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.86■□□□□ 0.29
AGAP3-226ENST00000622464 EDC4Q6P2E9 1401 aaKnown RBP16.85■□□□□ 0.29
AGAP3-226ENST00000622464 ANKRD26Q9UPS8 1709 aa16.85■□□□□ 0.29
AGAP3-226ENST00000622464 ANP32AP39687 249 aaKnown RBP16.85■□□□□ 0.29
AGAP3-226ENST00000622464 CCDC27Q2M243 656 aa16.85■□□□□ 0.29
AGAP3-226ENST00000622464 CENPQQ7L2Z9 268 aaPredicted RBP16.85■□□□□ 0.29
AGAP3-226ENST00000622464 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
AGAP3-226ENST00000622464 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
AGAP3-226ENST00000622464 C3P01024 1663 aa16.85■□□□□ 0.29
AGAP3-226ENST00000622464 BACH2Q9BYV9 841 aa16.85■□□□□ 0.29
AGAP3-226ENST00000622464 PNPLA6Q8IY17 1366 aa16.84■□□□□ 0.29
AGAP3-226ENST00000622464 PLEKHG1Q9ULL1 1385 aa16.84■□□□□ 0.29
AGAP3-226ENST00000622464 KCNA6P17658 529 aa16.83■□□□□ 0.29
AGAP3-226ENST00000622464 IL13P35225 146 aa16.83■□□□□ 0.29
AGAP3-226ENST00000622464 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.29
AGAP3-226ENST00000622464 ADGRB2O60241 1585 aa16.83■□□□□ 0.28
AGAP3-226ENST00000622464 TTC21BQ7Z4L5 1316 aa16.83■□□□□ 0.28
AGAP3-226ENST00000622464 MED14O60244 1454 aa16.83■□□□□ 0.28
AGAP3-226ENST00000622464 HSP90AB2PQ58FF8 381 aa16.83■□□□□ 0.28
AGAP3-226ENST00000622464 FAM135BQ49AJ0 1406 aa16.82■□□□□ 0.28
AGAP3-226ENST00000622464 FTSJ3Q8IY81 847 aaKnown RBP16.82■□□□□ 0.28
AGAP3-226ENST00000622464 TECPR2O15040 1411 aa16.81■□□□□ 0.28
AGAP3-226ENST00000622464 NGDNQ8NEJ9 315 aaKnown RBP16.81■□□□□ 0.28
AGAP3-226ENST00000622464 FCHSD2O94868 740 aa16.81■□□□□ 0.28
AGAP3-226ENST00000622464 NEFMP07197 916 aa16.81■□□□□ 0.28
AGAP3-226ENST00000622464 CDC42BPGQ6DT37 1551 aa16.81■□□□□ 0.28
AGAP3-226ENST00000622464 FER1L4A9Z1Z3 1794 aa16.81■□□□□ 0.28
AGAP3-226ENST00000622464 PDE3AQ14432 1141 aa16.81■□□□□ 0.28
AGAP3-226ENST00000622464 TSPYL6Q8N831 410 aa16.81■□□□□ 0.28
AGAP3-226ENST00000622464 C14orf37Q86TY3 774 aa16.8■□□□□ 0.28
AGAP3-226ENST00000622464 NOB1Q9ULX3 412 aaKnown RBP16.8■□□□□ 0.28
AGAP3-226ENST00000622464 NBR1Q14596 966 aa16.8■□□□□ 0.28
AGAP3-226ENST00000622464 SULT6B1Q6IMI4 303 aa16.8■□□□□ 0.28
AGAP3-226ENST00000622464 THEMISQ8N1K5 641 aaPredicted RBP16.8■□□□□ 0.28
AGAP3-226ENST00000622464 NOP58Q9Y2X3 529 aaKnown RBP16.8■□□□□ 0.28
AGAP3-226ENST00000622464 TRIM27P14373 513 aa16.79■□□□□ 0.28
AGAP3-226ENST00000622464 ITPRIPQ8IWB1 547 aa16.79■□□□□ 0.28
AGAP3-226ENST00000622464 EIF4A2Q14240 407 aaKnown RBP16.79■□□□□ 0.28
AGAP3-226ENST00000622464 NFE2L2Q16236 605 aa16.78■□□□□ 0.28
AGAP3-226ENST00000622464 SLC4A3P48751 1232 aa16.77■□□□□ 0.28
AGAP3-226ENST00000622464 KRT24Q2M2I5 525 aa16.77■□□□□ 0.28
AGAP3-226ENST00000622464 ZKSCAN2Q63HK3 967 aa16.77■□□□□ 0.28
AGAP3-226ENST00000622464 IPO9Q96P70 1041 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms