RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 ADGRB2O60241 1585 aa18.25■□□□□ 0.51
EPB42-210ENST00000622454 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
EPB42-210ENST00000622454 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
EPB42-210ENST00000622454 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
EPB42-210ENST00000622454 WDR63Q8IWG1 891 aa18.24■□□□□ 0.51
EPB42-210ENST00000622454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.24■□□□□ 0.51
EPB42-210ENST00000622454 CDC42BPGQ6DT37 1551 aa18.24■□□□□ 0.51
EPB42-210ENST00000622454 C20orf194Q5TEA3 1177 aa18.23■□□□□ 0.51
EPB42-210ENST00000622454 NUDT16Q96DE0 195 aaKnown RBP18.23■□□□□ 0.51
EPB42-210ENST00000622454 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
EPB42-210ENST00000622454 MAP2P11137 1827 aaKnown RBP18.23■□□□□ 0.51
EPB42-210ENST00000622454 PNPLA6Q8IY17 1366 aa18.23■□□□□ 0.51
EPB42-210ENST00000622454 ITSN1Q15811 1721 aa18.23■□□□□ 0.51
EPB42-210ENST00000622454 CCDC61Q9Y6R9 512 aa18.23■□□□□ 0.51
EPB42-210ENST00000622454 AKAP12Q02952 1782 aa18.23■□□□□ 0.51
EPB42-210ENST00000622454 ROBO2Q9HCK4 1378 aa18.23■□□□□ 0.51
EPB42-210ENST00000622454 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
EPB42-210ENST00000622454 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
EPB42-210ENST00000622454 DIAPH1O60610 1272 aaKnown RBP18.2■□□□□ 0.5
EPB42-210ENST00000622454 PLEKHF1Q96S99 279 aa18.19■□□□□ 0.5
EPB42-210ENST00000622454 TBX22Q9Y458 520 aa18.18■□□□□ 0.5
EPB42-210ENST00000622454 PTPRUQ92729 1446 aa18.18■□□□□ 0.5
EPB42-210ENST00000622454 FANCIQ9NVI1 1328 aa18.18■□□□□ 0.5
EPB42-210ENST00000622454 BCAR3O75815 825 aa18.18■□□□□ 0.5
EPB42-210ENST00000622454 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
EPB42-210ENST00000622454 ZNF692Q9BU19 519 aaPredicted RBP18.17■□□□□ 0.5
EPB42-210ENST00000622454 POLKQ9UBT6 870 aa18.17■□□□□ 0.5
EPB42-210ENST00000622454 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
EPB42-210ENST00000622454 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
EPB42-210ENST00000622454 NCKAP5LQ9HCH0 1330 aa18.16■□□□□ 0.5
EPB42-210ENST00000622454 DIP2AQ14689 1571 aa18.16■□□□□ 0.5
EPB42-210ENST00000622454 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
EPB42-210ENST00000622454 TOPAZ1Q8N9V7 1692 aa18.16■□□□□ 0.5
EPB42-210ENST00000622454 PRR36Q9H6K5 1346 aa18.16■□□□□ 0.5
EPB42-210ENST00000622454 MYH16Q9H6N6 1097 aa18.15■□□□□ 0.5
EPB42-210ENST00000622454 NME9Q86XW9 330 aa18.15■□□□□ 0.5
EPB42-210ENST00000622454 TMPOP42166 694 aaKnown RBP18.14■□□□□ 0.49
EPB42-210ENST00000622454 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.49
EPB42-210ENST00000622454 AATKQ6ZMQ8 1374 aa18.14■□□□□ 0.49
EPB42-210ENST00000622454 SETD1BQ9UPS6 1966 aaKnown RBP18.13■□□□□ 0.49
EPB42-210ENST00000622454 COG3Q96JB2 828 aa18.13■□□□□ 0.49
EPB42-210ENST00000622454 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
EPB42-210ENST00000622454 FCHSD2O94868 740 aa18.13■□□□□ 0.49
EPB42-210ENST00000622454 ANKLE2Q86XL3 938 aa18.13■□□□□ 0.49
EPB42-210ENST00000622454 FBLN1P23142 703 aa18.12■□□□□ 0.49
EPB42-210ENST00000622454 PDE3AQ14432 1141 aa18.12■□□□□ 0.49
EPB42-210ENST00000622454 CDK12Q9NYV4 1490 aaPredicted RBP18.12■□□□□ 0.49
EPB42-210ENST00000622454 NRKQ7Z2Y5 1582 aa18.11■□□□□ 0.49
EPB42-210ENST00000622454 LRRC7Q96NW7 1537 aa18.11■□□□□ 0.49
EPB42-210ENST00000622454 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
EPB42-210ENST00000622454 RARSP54136 660 aaKnown RBP18.11■□□□□ 0.49
EPB42-210ENST00000622454 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
EPB42-210ENST00000622454 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
EPB42-210ENST00000622454 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
EPB42-210ENST00000622454 PLEKHG3A1L390 1219 aa18.09■□□□□ 0.49
EPB42-210ENST00000622454 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
EPB42-210ENST00000622454 EMILIN1Q9Y6C2 1016 aa18.09■□□□□ 0.49
EPB42-210ENST00000622454 NUTM2FA1L443 756 aa18.08■□□□□ 0.49
EPB42-210ENST00000622454 CENPQQ7L2Z9 268 aaPredicted RBP18.08■□□□□ 0.49
EPB42-210ENST00000622454 ACEP12821 1306 aa18.08■□□□□ 0.48
EPB42-210ENST00000622454 IL16Q14005 1332 aa18.08■□□□□ 0.48
EPB42-210ENST00000622454 NEFMP07197 916 aa18.08■□□□□ 0.48
EPB42-210ENST00000622454 RIPK4P57078 832 aa18.08■□□□□ 0.48
EPB42-210ENST00000622454 RSPH6AQ9H0K4 717 aa18.08■□□□□ 0.48
EPB42-210ENST00000622454 XRN1Q8IZH2 1706 aaKnown RBP18.08■□□□□ 0.48
EPB42-210ENST00000622454 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
EPB42-210ENST00000622454 MS4A1P11836 297 aa18.07■□□□□ 0.48
EPB42-210ENST00000622454 KCNA6P17658 529 aa18.06■□□□□ 0.48
EPB42-210ENST00000622454 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
EPB42-210ENST00000622454 PRKAR2BP31323 418 aa18.06■□□□□ 0.48
EPB42-210ENST00000622454 IL13P35225 146 aa18.06■□□□□ 0.48
EPB42-210ENST00000622454 PIK3R4Q99570 1358 aa18.06■□□□□ 0.48
EPB42-210ENST00000622454 USP6P35125 1406 aa18.05■□□□□ 0.48
EPB42-210ENST00000622454 FRAT1Q92837 279 aaPredicted RBP18.05■□□□□ 0.48
EPB42-210ENST00000622454 RGPD8O14715 1765 aaPredicted RBP18.04■□□□□ 0.48
EPB42-210ENST00000622454 TSR2Q969E8 191 aaKnown RBP18.04■□□□□ 0.48
EPB42-210ENST00000622454 NALCNQ8IZF0 1738 aa18.03■□□□□ 0.48
EPB42-210ENST00000622454 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
EPB42-210ENST00000622454 OVOS2A0A0J9YW53 1432 aa18.02■□□□□ 0.48
EPB42-210ENST00000622454 HMOX1P09601 288 aa18.02■□□□□ 0.48
EPB42-210ENST00000622454 OVOS2Q6IE36 1432 aa18.02■□□□□ 0.48
EPB42-210ENST00000622454 PANK1Q8TE04 598 aa18.02■□□□□ 0.48
EPB42-210ENST00000622454 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
EPB42-210ENST00000622454 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
EPB42-210ENST00000622454 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
EPB42-210ENST00000622454 AAMPQ13685 434 aa18■□□□□ 0.47
EPB42-210ENST00000622454 NFE2L2Q16236 605 aa18■□□□□ 0.47
EPB42-210ENST00000622454 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
EPB42-210ENST00000622454 SSH2Q76I76 1423 aa18■□□□□ 0.47
EPB42-210ENST00000622454 MSH5O43196 834 aa18■□□□□ 0.47
EPB42-210ENST00000622454 CLUAP1Q96AJ1 413 aa17.99■□□□□ 0.47
EPB42-210ENST00000622454 PHACTR3Q96KR7 559 aa17.99■□□□□ 0.47
EPB42-210ENST00000622454 NPHP4O75161 1426 aaPredicted RBP17.99■□□□□ 0.47
EPB42-210ENST00000622454 DLG5Q8TDM6 1919 aa17.99■□□□□ 0.47
EPB42-210ENST00000622454 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
EPB42-210ENST00000622454 PDE4AP27815 886 aa17.98■□□□□ 0.47
EPB42-210ENST00000622454 USP31Q70CQ4 1352 aa17.97■□□□□ 0.47
EPB42-210ENST00000622454 CALD1Q05682 793 aaKnown RBP17.97■□□□□ 0.47
EPB42-210ENST00000622454 BACH2Q9BYV9 841 aa17.97■□□□□ 0.47
EPB42-210ENST00000622454 ANKARQ7Z5J8 1434 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms