RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 KTN1Q86UP2 1357 aaKnown RBP25.82■■□□□ 1.72
CIRBP-245ENST00000621399 CPSF1Q10570 1443 aaKnown RBP25.81■■□□□ 1.72
CIRBP-245ENST00000621399 SHPRHQ149N8 1683 aa25.81■■□□□ 1.72
CIRBP-245ENST00000621399 C11orf95C9JLR9 678 aaPredicted RBP25.81■■□□□ 1.72
CIRBP-245ENST00000621399 BRD4O60885 1362 aaPredicted RBP25.81■■□□□ 1.72
CIRBP-245ENST00000621399 PLEKHG5O94827 1062 aa25.8■■□□□ 1.72
CIRBP-245ENST00000621399 CD163L1Q9NR16 1453 aa25.79■■□□□ 1.72
CIRBP-245ENST00000621399 TRPM3Q9HCF6 1732 aaPredicted RBP25.78■■□□□ 1.72
CIRBP-245ENST00000621399 ABTB2Q8N961 1025 aa25.78■■□□□ 1.72
CIRBP-245ENST00000621399 A0A1W2PP64 1363 aa25.77■■□□□ 1.72
CIRBP-245ENST00000621399 SSH2Q76I76 1423 aa25.75■■□□□ 1.71
CIRBP-245ENST00000621399 TTC21BQ7Z4L5 1316 aa25.75■■□□□ 1.71
CIRBP-245ENST00000621399 MEX3CQ5U5Q3 659 aaKnown RBP25.75■■□□□ 1.71
CIRBP-245ENST00000621399 NUTM2GQ5VZR2 741 aa25.75■■□□□ 1.71
CIRBP-245ENST00000621399 CABLES1Q8TDN4 633 aa25.75■■□□□ 1.71
CIRBP-245ENST00000621399 ANKRD36BQ8N2N9 1353 aa25.74■■□□□ 1.71
CIRBP-245ENST00000621399 HAP1P54257 671 aaPredicted RBP25.74■■□□□ 1.71
CIRBP-245ENST00000621399 COL22A1Q8NFW1 1626 aaPredicted RBP25.74■■□□□ 1.71
CIRBP-245ENST00000621399 KIF7Q2M1P5 1343 aa25.73■■□□□ 1.71
CIRBP-245ENST00000621399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.73■■□□□ 1.71
CIRBP-245ENST00000621399 TTC21AQ8NDW8 1320 aa25.72■■□□□ 1.71
CIRBP-245ENST00000621399 ADAMTS2O95450 1211 aa25.72■■□□□ 1.71
CIRBP-245ENST00000621399 LRP6O75581 1613 aa25.72■■□□□ 1.71
CIRBP-245ENST00000621399 AKAP12Q02952 1782 aa25.72■■□□□ 1.71
CIRBP-245ENST00000621399 ALS2Q96Q42 1657 aa25.71■■□□□ 1.71
CIRBP-245ENST00000621399 NLRP6P59044 892 aa25.7■■□□□ 1.7
CIRBP-245ENST00000621399 NLRP13Q86W25 1043 aa25.7■■□□□ 1.7
CIRBP-245ENST00000621399 PHF23Q9BUL5 403 aaPredicted RBP25.7■■□□□ 1.7
CIRBP-245ENST00000621399 EDC4Q6P2E9 1401 aaKnown RBP25.7■■□□□ 1.7
CIRBP-245ENST00000621399 MON2Q7Z3U7 1717 aa25.67■■□□□ 1.7
CIRBP-245ENST00000621399 CCDC7Q96M83 1385 aa25.66■■□□□ 1.7
CIRBP-245ENST00000621399 WASHC2AQ641Q2 1341 aa25.65■■□□□ 1.7
CIRBP-245ENST00000621399 MYOM1P52179 1685 aa25.65■■□□□ 1.7
CIRBP-245ENST00000621399 NME9Q86XW9 330 aa25.65■■□□□ 1.7
CIRBP-245ENST00000621399 C8orf37Q96NL8 207 aa25.65■■□□□ 1.7
CIRBP-245ENST00000621399 CARD14Q9BXL6 1004 aa25.65■■□□□ 1.7
CIRBP-245ENST00000621399 NRKQ7Z2Y5 1582 aa25.65■■□□□ 1.7
CIRBP-245ENST00000621399 PANK3Q9H999 370 aa25.64■■□□□ 1.7
CIRBP-245ENST00000621399 USP19O94966 1318 aa25.63■■□□□ 1.69
CIRBP-245ENST00000621399 NGLY1Q96IV0 654 aa25.62■■□□□ 1.69
CIRBP-245ENST00000621399 ZRANB1Q9UGI0 708 aa25.62■■□□□ 1.69
CIRBP-245ENST00000621399 PIK3C2AO00443 1686 aa25.61■■□□□ 1.69
CIRBP-245ENST00000621399 GCP02774 474 aa25.6■■□□□ 1.69
CIRBP-245ENST00000621399 NSD3Q9BZ95 1437 aa25.6■■□□□ 1.69
CIRBP-245ENST00000621399 USP31Q70CQ4 1352 aa25.59■■□□□ 1.69
CIRBP-245ENST00000621399 ZC3H6P61129 1189 aaKnown RBP25.58■■□□□ 1.69
CIRBP-245ENST00000621399 FYB1O15117 783 aa25.57■■□□□ 1.68
CIRBP-245ENST00000621399 SOX12O15370 315 aa25.56■■□□□ 1.68
CIRBP-245ENST00000621399 KCNH5Q8NCM2 988 aa25.56■■□□□ 1.68
CIRBP-245ENST00000621399 COG3Q96JB2 828 aa25.56■■□□□ 1.68
CIRBP-245ENST00000621399 AFF2P51816 1311 aa25.56■■□□□ 1.68
CIRBP-245ENST00000621399 ABCA3Q99758 1704 aa25.55■■□□□ 1.68
CIRBP-245ENST00000621399 FAM83GA6ND36 823 aa25.55■■□□□ 1.68
CIRBP-245ENST00000621399 GGNBP2Q9H3C7 697 aa25.55■■□□□ 1.68
CIRBP-245ENST00000621399 PRDM11Q9NQV5 511 aa25.55■■□□□ 1.68
CIRBP-245ENST00000621399 CGNL1Q0VF96 1302 aa25.54■■□□□ 1.68
CIRBP-245ENST00000621399 KIAA0232Q92628 1395 aa25.54■■□□□ 1.68
CIRBP-245ENST00000621399 CRYBG1Q9Y4K1 1723 aa25.54■■□□□ 1.68
CIRBP-245ENST00000621399 PHRF1Q9P1Y6 1649 aaKnown RBP25.53■■□□□ 1.68
CIRBP-245ENST00000621399 FNBP4Q8N3X1 1017 aaPredicted RBP25.53■■□□□ 1.68
CIRBP-245ENST00000621399 RGS17Q9UGC6 210 aaPredicted RBP25.53■■□□□ 1.68
CIRBP-245ENST00000621399 SLIT3O75094 1523 aa25.53■■□□□ 1.68
CIRBP-245ENST00000621399 ZNF772Q68DY9 489 aaPredicted RBP25.52■■□□□ 1.68
CIRBP-245ENST00000621399 KNSTRNQ9Y448 316 aa25.52■■□□□ 1.68
CIRBP-245ENST00000621399 ZBTB7CA1YPR0 619 aa25.51■■□□□ 1.67
CIRBP-245ENST00000621399 USP21Q9UK80 565 aa25.51■■□□□ 1.67
CIRBP-245ENST00000621399 OVOS2A0A0J9YW53 1432 aa25.51■■□□□ 1.67
CIRBP-245ENST00000621399 OVOS2Q6IE36 1432 aa25.51■■□□□ 1.67
CIRBP-245ENST00000621399 CPDO75976 1380 aa25.5■■□□□ 1.67
CIRBP-245ENST00000621399 CHRNA2Q15822 529 aa25.5■■□□□ 1.67
CIRBP-245ENST00000621399 MARF1Q9Y4F3 1742 aaKnown RBP25.49■■□□□ 1.67
CIRBP-245ENST00000621399 BTG4Q9NY30 223 aa25.47■■□□□ 1.67
CIRBP-245ENST00000621399 ARHGEF25Q86VW2 580 aa25.46■■□□□ 1.67
CIRBP-245ENST00000621399 SLIT2O94813 1529 aa25.46■■□□□ 1.67
CIRBP-245ENST00000621399 USP54Q70EL1 1684 aa25.45■■□□□ 1.67
CIRBP-245ENST00000621399 UNC5CLQ8IV45 518 aa25.45■■□□□ 1.66
CIRBP-245ENST00000621399 PER1O15534 1290 aaPredicted RBP25.44■■□□□ 1.66
CIRBP-245ENST00000621399 QTRT2Q9H974 415 aaKnown RBP25.44■■□□□ 1.66
CIRBP-245ENST00000621399 BCL9LQ86UU0 1499 aa25.44■■□□□ 1.66
CIRBP-245ENST00000621399 POTEAQ6S8J7 498 aa25.43■■□□□ 1.66
CIRBP-245ENST00000621399 COL14A1Q05707 1796 aaKnown RBP25.43■■□□□ 1.66
CIRBP-245ENST00000621399 NFAT5O94916 1531 aa25.42■■□□□ 1.66
CIRBP-245ENST00000621399 TRPC5Q9UL62 973 aaPredicted RBP25.42■■□□□ 1.66
CIRBP-245ENST00000621399 AATKQ6ZMQ8 1374 aa25.42■■□□□ 1.66
CIRBP-245ENST00000621399 KIF20BQ96Q89 1820 aa25.42■■□□□ 1.66
CIRBP-245ENST00000621399 FBLN1P23142 703 aa25.41■■□□□ 1.66
CIRBP-245ENST00000621399 NSD2O96028 1365 aa25.41■■□□□ 1.66
CIRBP-245ENST00000621399 AMER1Q5JTC6 1135 aaPredicted RBP25.4■■□□□ 1.66
CIRBP-245ENST00000621399 EVA1CP58658 441 aa25.39■■□□□ 1.66
CIRBP-245ENST00000621399 STRN4Q9NRL3 753 aa25.39■■□□□ 1.66
CIRBP-245ENST00000621399 PLCH1Q4KWH8 1693 aa25.39■■□□□ 1.65
CIRBP-245ENST00000621399 MORC1Q86VD1 984 aa25.38■■□□□ 1.65
CIRBP-245ENST00000621399 ZNF316A6NFI3 1004 aaPredicted RBP25.37■■□□□ 1.65
CIRBP-245ENST00000621399 AXIN2Q9Y2T1 843 aa25.37■■□□□ 1.65
CIRBP-245ENST00000621399 RXRBP28702 533 aa25.36■■□□□ 1.65
CIRBP-245ENST00000621399 TNNT2P45379 298 aaPredicted RBP25.36■■□□□ 1.65
CIRBP-245ENST00000621399 RRS1Q15050 365 aaKnown RBP25.36■■□□□ 1.65
CIRBP-245ENST00000621399 VPS72Q15906 364 aa25.36■■□□□ 1.65
CIRBP-245ENST00000621399 CCDC9Q9Y3X0 531 aaKnown RBP25.36■■□□□ 1.65
CIRBP-245ENST00000621399 ATRNO75882 1429 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms