RNA–Protein interactions for RNA: ENST00000621323.4

PDE4D-227, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-227ENST00000621323 PCDH10Q9P2E7 1040 aa10.12□□□□□ -0.79
PDE4D-227ENST00000621323 DISP2A7MBM2 1401 aa10.12□□□□□ -0.79
PDE4D-227ENST00000621323 ZNF784Q8NCA9 323 aaPredicted RBP10.11□□□□□ -0.79
PDE4D-227ENST00000621323 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
PDE4D-227ENST00000621323 KRT27Q7Z3Y8 459 aa10.1□□□□□ -0.79
PDE4D-227ENST00000621323 DAPK1P53355 1430 aa10.09□□□□□ -0.79
PDE4D-227ENST00000621323 PTPN23Q9H3S7 1636 aa10.09□□□□□ -0.79
PDE4D-227ENST00000621323 TNS1Q9HBL0 1735 aaKnown RBP10.09□□□□□ -0.79
PDE4D-227ENST00000621323 CAMTA1Q9Y6Y1 1673 aa10.09□□□□□ -0.79
PDE4D-227ENST00000621323 USP32Q8NFA0 1604 aa10.08□□□□□ -0.8
PDE4D-227ENST00000621323 ADGRL2O95490 1459 aa10.08□□□□□ -0.8
PDE4D-227ENST00000621323 CLCN6P51797 869 aa10.07□□□□□ -0.8
PDE4D-227ENST00000621323 C1QTNF8P60827 252 aa10.07□□□□□ -0.8
PDE4D-227ENST00000621323 VPS72Q15906 364 aa10.07□□□□□ -0.8
PDE4D-227ENST00000621323 RGPD1P0DJD0 1748 aa10.07□□□□□ -0.8
PDE4D-227ENST00000621323 ROBO2Q9HCK4 1378 aa10.06□□□□□ -0.8
PDE4D-227ENST00000621323 NINLQ9Y2I6 1382 aa10.06□□□□□ -0.8
PDE4D-227ENST00000621323 XPCQ01831 940 aaPredicted RBP10.06□□□□□ -0.8
PDE4D-227ENST00000621323 EZH2Q15910 746 aaKnown RBP10.06□□□□□ -0.8
PDE4D-227ENST00000621323 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
PDE4D-227ENST00000621323 RIOK3O14730 519 aaKnown RBP10.05□□□□□ -0.8
PDE4D-227ENST00000621323 NUBP1P53384 320 aa10.05□□□□□ -0.8
PDE4D-227ENST00000621323 HS6ST3Q8IZP7 471 aa10.05□□□□□ -0.8
PDE4D-227ENST00000621323 NPHP3Q7Z494 1330 aa10.05□□□□□ -0.8
PDE4D-227ENST00000621323 IQGAP3Q86VI3 1631 aa10.04□□□□□ -0.8
PDE4D-227ENST00000621323 ANKRD30AQ9BXX3 1397 aa10.04□□□□□ -0.8
PDE4D-227ENST00000621323 E9PCH4 1651 aa10.04□□□□□ -0.8
PDE4D-227ENST00000621323 PLCH1Q4KWH8 1693 aa10.04□□□□□ -0.8
PDE4D-227ENST00000621323 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
PDE4D-227ENST00000621323 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
PDE4D-227ENST00000621323 PRAG1Q86YV5 1406 aa10.04□□□□□ -0.8
PDE4D-227ENST00000621323 STK25O00506 426 aa10.03□□□□□ -0.8
PDE4D-227ENST00000621323 KANK4Q5T7N3 995 aaPredicted RBP10.03□□□□□ -0.8
PDE4D-227ENST00000621323 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
PDE4D-227ENST00000621323 CHIC2Q9UKJ5 165 aa10.03□□□□□ -0.8
PDE4D-227ENST00000621323 KDM2AQ9Y2K7 1162 aa10.03□□□□□ -0.8
PDE4D-227ENST00000621323 NWD2Q9ULI1 1742 aa10.02□□□□□ -0.8
PDE4D-227ENST00000621323 FARP1Q9Y4F1 1045 aaPredicted RBP10.02□□□□□ -0.81
PDE4D-227ENST00000621323 RREB1Q92766 1687 aa10.02□□□□□ -0.81
PDE4D-227ENST00000621323 ADGRB2O60241 1585 aa10.01□□□□□ -0.81
PDE4D-227ENST00000621323 CDC42BPGQ6DT37 1551 aa10.01□□□□□ -0.81
PDE4D-227ENST00000621323 FOXO3O43524 673 aa10.01□□□□□ -0.81
PDE4D-227ENST00000621323 GOLGB1Q14789 3259 aaKnown RBP10.01□□□□□ -0.81
PDE4D-227ENST00000621323 NUP188Q5SRE5 1749 aa10.01□□□□□ -0.81
PDE4D-227ENST00000621323 ANKRD50Q9ULJ7 1429 aa10□□□□□ -0.81
PDE4D-227ENST00000621323 THSD7AQ9UPZ6 1657 aa10□□□□□ -0.81
PDE4D-227ENST00000621323 NRAPQ86VF7 1730 aa10□□□□□ -0.81
PDE4D-227ENST00000621323 FAM98CQ17RN3 349 aaKnown RBP10□□□□□ -0.81
PDE4D-227ENST00000621323 SPATA31A3Q5VYP0 1347 aa10□□□□□ -0.81
PDE4D-227ENST00000621323 NEXMIFQ5QGS0 1516 aa9.99□□□□□ -0.81
PDE4D-227ENST00000621323 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
PDE4D-227ENST00000621323 ESCO1Q5FWF5 840 aa9.99□□□□□ -0.81
PDE4D-227ENST00000621323 RNF25Q96BH1 459 aaPredicted RBP9.99□□□□□ -0.81
PDE4D-227ENST00000621323 CCDC9Q9Y3X0 531 aaKnown RBP9.99□□□□□ -0.81
PDE4D-227ENST00000621323 ABCA3Q99758 1704 aa9.99□□□□□ -0.81
PDE4D-227ENST00000621323 A0A0G2JS52 829 aa9.98□□□□□ -0.81
PDE4D-227ENST00000621323 VGFO15240 615 aaPredicted RBP9.98□□□□□ -0.81
PDE4D-227ENST00000621323 MYT1Q01538 1121 aa9.98□□□□□ -0.81
PDE4D-227ENST00000621323 SPON1Q9HCB6 807 aa9.98□□□□□ -0.81
PDE4D-227ENST00000621323 PPP1R1BQ9UD71 204 aaPredicted RBP9.98□□□□□ -0.81
PDE4D-227ENST00000621323 PARD3Q8TEW0 1356 aa9.98□□□□□ -0.81
PDE4D-227ENST00000621323 NBR1Q14596 966 aa9.97□□□□□ -0.81
PDE4D-227ENST00000621323 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
PDE4D-227ENST00000621323 CABLES1Q8TDN4 633 aa9.97□□□□□ -0.81
PDE4D-227ENST00000621323 HFM1A2PYH4 1435 aa9.97□□□□□ -0.81
PDE4D-227ENST00000621323 NRKQ7Z2Y5 1582 aa9.97□□□□□ -0.81
PDE4D-227ENST00000621323 KCNQ2O43526 872 aa9.96□□□□□ -0.82
PDE4D-227ENST00000621323 PYGBP11216 843 aa9.96□□□□□ -0.82
PDE4D-227ENST00000621323 ZNF579Q8NAF0 562 aaKnown RBP9.96□□□□□ -0.82
PDE4D-227ENST00000621323 STK24Q9Y6E0 443 aa9.96□□□□□ -0.82
PDE4D-227ENST00000621323 TNS3Q68CZ2 1445 aa9.96□□□□□ -0.82
PDE4D-227ENST00000621323 FAM83GA6ND36 823 aa9.95□□□□□ -0.82
PDE4D-227ENST00000621323 TRIM37O94972 964 aa9.95□□□□□ -0.82
PDE4D-227ENST00000621323 PRKCSHP14314 528 aaPredicted RBP9.95□□□□□ -0.82
PDE4D-227ENST00000621323 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
PDE4D-227ENST00000621323 CCDC144AA2RUR9 1427 aa9.95□□□□□ -0.82
PDE4D-227ENST00000621323 NAIPQ13075 1403 aa9.94□□□□□ -0.82
PDE4D-227ENST00000621323 LRPPRCP42704 1394 aaKnown RBP9.94□□□□□ -0.82
PDE4D-227ENST00000621323 CASZ1Q86V15 1759 aa9.93□□□□□ -0.82
PDE4D-227ENST00000621323 MYOM1P52179 1685 aa9.93□□□□□ -0.82
PDE4D-227ENST00000621323 VPS8Q8N3P4 1428 aa9.93□□□□□ -0.82
PDE4D-227ENST00000621323 SPATA31A5Q5VU36 1347 aa9.93□□□□□ -0.82
PDE4D-227ENST00000621323 SPATA31A7Q8IWB4 1347 aa9.93□□□□□ -0.82
PDE4D-227ENST00000621323 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
PDE4D-227ENST00000621323 APBA3O96018 575 aa9.92□□□□□ -0.82
PDE4D-227ENST00000621323 KIF1AQ12756 1690 aa9.91□□□□□ -0.82
PDE4D-227ENST00000621323 NUTM2FA1L443 756 aa9.91□□□□□ -0.82
PDE4D-227ENST00000621323 ZNF326Q5BKZ1 582 aaKnown RBP9.91□□□□□ -0.82
PDE4D-227ENST00000621323 FAM163AQ96GL9 167 aaPredicted RBP9.91□□□□□ -0.82
PDE4D-227ENST00000621323 BCL11BQ9C0K0 894 aaPredicted RBP9.91□□□□□ -0.82
PDE4D-227ENST00000621323 GIGYF1O75420 1035 aaPredicted RBP9.9□□□□□ -0.82
PDE4D-227ENST00000621323 PTGER2P43116 358 aa9.9□□□□□ -0.82
PDE4D-227ENST00000621323 KRT28Q7Z3Y7 464 aa9.9□□□□□ -0.82
PDE4D-227ENST00000621323 PDGFDQ9GZP0 370 aaPredicted RBP9.9□□□□□ -0.82
PDE4D-227ENST00000621323 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
PDE4D-227ENST00000621323 ANO8Q9HCE9 1232 aaPredicted RBP9.9□□□□□ -0.82
PDE4D-227ENST00000621323 BTG4Q9NY30 223 aa9.9□□□□□ -0.82
PDE4D-227ENST00000621323 CLTCL1P53675 1640 aa9.89□□□□□ -0.83
PDE4D-227ENST00000621323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
PDE4D-227ENST00000621323 MNX1P50219 401 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms