RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 PLEKHG3A1L390 1219 aa18.75■□□□□ 0.59
MUC1-229ENST00000620770 PSME1Q06323 249 aa18.75■□□□□ 0.59
MUC1-229ENST00000620770 PUS7Q96PZ0 661 aaKnown RBP18.75■□□□□ 0.59
MUC1-229ENST00000620770 KIF7Q2M1P5 1343 aa18.74■□□□□ 0.59
MUC1-229ENST00000620770 KRT28Q7Z3Y7 464 aa18.73■□□□□ 0.59
MUC1-229ENST00000620770 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
MUC1-229ENST00000620770 POLR3AO14802 1390 aaPredicted RBP18.72■□□□□ 0.59
MUC1-229ENST00000620770 RBM6P78332 1123 aaKnown RBP18.72■□□□□ 0.59
MUC1-229ENST00000620770 RGS12O14924 1447 aa18.72■□□□□ 0.59
MUC1-229ENST00000620770 MYOM1P52179 1685 aa18.72■□□□□ 0.59
MUC1-229ENST00000620770 ABCA3Q99758 1704 aa18.71■□□□□ 0.59
MUC1-229ENST00000620770 CCDC7Q96M83 1385 aa18.71■□□□□ 0.59
MUC1-229ENST00000620770 NINLQ9Y2I6 1382 aa18.71■□□□□ 0.59
MUC1-229ENST00000620770 HDGFL2Q7Z4V5 671 aaPredicted RBP18.71■□□□□ 0.59
MUC1-229ENST00000620770 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
MUC1-229ENST00000620770 TNS3Q68CZ2 1445 aa18.71■□□□□ 0.59
MUC1-229ENST00000620770 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
MUC1-229ENST00000620770 TERF2IPQ9NYB0 399 aa18.7■□□□□ 0.58
MUC1-229ENST00000620770 USP21Q9UK80 565 aa18.7■□□□□ 0.58
MUC1-229ENST00000620770 SPATA31A3Q5VYP0 1347 aa18.7■□□□□ 0.58
MUC1-229ENST00000620770 WASHC2AQ641Q2 1341 aa18.7■□□□□ 0.58
MUC1-229ENST00000620770 A0A1W2PP64 1363 aa18.69■□□□□ 0.58
MUC1-229ENST00000620770 KTN1Q86UP2 1357 aaKnown RBP18.69■□□□□ 0.58
MUC1-229ENST00000620770 LMOD2Q6P5Q4 547 aa18.69■□□□□ 0.58
MUC1-229ENST00000620770 CD163L1Q9NR16 1453 aa18.69■□□□□ 0.58
MUC1-229ENST00000620770 USP6P35125 1406 aa18.68■□□□□ 0.58
MUC1-229ENST00000620770 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
MUC1-229ENST00000620770 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
MUC1-229ENST00000620770 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
MUC1-229ENST00000620770 CPSF1Q10570 1443 aaKnown RBP18.67■□□□□ 0.58
MUC1-229ENST00000620770 TRPM3Q9HCF6 1732 aaPredicted RBP18.67■□□□□ 0.58
MUC1-229ENST00000620770 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
MUC1-229ENST00000620770 ANKRD36BQ8N2N9 1353 aa18.67■□□□□ 0.58
MUC1-229ENST00000620770 ATRNO75882 1429 aa18.66■□□□□ 0.58
MUC1-229ENST00000620770 PLCH1Q4KWH8 1693 aa18.66■□□□□ 0.58
MUC1-229ENST00000620770 SBNO1A3KN83 1393 aa18.66■□□□□ 0.58
MUC1-229ENST00000620770 MON2Q7Z3U7 1717 aa18.66■□□□□ 0.58
MUC1-229ENST00000620770 UPF1Q92900 1129 aaKnown RBP eCLIP18.65■□□□□ 0.58
MUC1-229ENST00000620770 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
MUC1-229ENST00000620770 ARHGEF10O15013 1369 aa18.65■□□□□ 0.58
MUC1-229ENST00000620770 ALS2Q96Q42 1657 aa18.64■□□□□ 0.57
MUC1-229ENST00000620770 NWD2Q9ULI1 1742 aa18.64■□□□□ 0.57
MUC1-229ENST00000620770 HAP1P54257 671 aaPredicted RBP18.64■□□□□ 0.57
MUC1-229ENST00000620770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.64■□□□□ 0.57
MUC1-229ENST00000620770 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.57
MUC1-229ENST00000620770 NUTM2GQ5VZR2 741 aa18.63■□□□□ 0.57
MUC1-229ENST00000620770 BCL9LQ86UU0 1499 aa18.63■□□□□ 0.57
MUC1-229ENST00000620770 PANK3Q9H999 370 aa18.62■□□□□ 0.57
MUC1-229ENST00000620770 TTC21BQ7Z4L5 1316 aa18.62■□□□□ 0.57
MUC1-229ENST00000620770 EDC4Q6P2E9 1401 aaKnown RBP18.62■□□□□ 0.57
MUC1-229ENST00000620770 SLIT2O94813 1529 aa18.61■□□□□ 0.57
MUC1-229ENST00000620770 NSD3Q9BZ95 1437 aa18.61■□□□□ 0.57
MUC1-229ENST00000620770 SSH2Q76I76 1423 aa18.6■□□□□ 0.57
MUC1-229ENST00000620770 ABTB2Q8N961 1025 aa18.6■□□□□ 0.57
MUC1-229ENST00000620770 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
MUC1-229ENST00000620770 ZNF316A6NFI3 1004 aaPredicted RBP18.59■□□□□ 0.57
MUC1-229ENST00000620770 NME9Q86XW9 330 aa18.59■□□□□ 0.57
MUC1-229ENST00000620770 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
MUC1-229ENST00000620770 CRYBG1Q9Y4K1 1723 aa18.58■□□□□ 0.57
MUC1-229ENST00000620770 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.57
MUC1-229ENST00000620770 PIK3C2AO00443 1686 aa18.58■□□□□ 0.57
MUC1-229ENST00000620770 GLI3P10071 1580 aa18.57■□□□□ 0.56
MUC1-229ENST00000620770 CABLES1Q8TDN4 633 aa18.57■□□□□ 0.56
MUC1-229ENST00000620770 NLRP6P59044 892 aa18.56■□□□□ 0.56
MUC1-229ENST00000620770 UNC5CLQ8IV45 518 aa18.56■□□□□ 0.56
MUC1-229ENST00000620770 ZRANB1Q9UGI0 708 aa18.56■□□□□ 0.56
MUC1-229ENST00000620770 NRAPQ86VF7 1730 aa18.55■□□□□ 0.56
MUC1-229ENST00000620770 GJD4Q96KN9 370 aaPredicted RBP18.55■□□□□ 0.56
MUC1-229ENST00000620770 COL14A1Q05707 1796 aaKnown RBP18.55■□□□□ 0.56
MUC1-229ENST00000620770 SOX12O15370 315 aa18.53■□□□□ 0.56
MUC1-229ENST00000620770 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
MUC1-229ENST00000620770 NLRP13Q86W25 1043 aa18.53■□□□□ 0.56
MUC1-229ENST00000620770 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
MUC1-229ENST00000620770 BRWD3Q6RI45 1802 aa18.53■□□□□ 0.56
MUC1-229ENST00000620770 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.56
MUC1-229ENST00000620770 CGNL1Q0VF96 1302 aa18.52■□□□□ 0.56
MUC1-229ENST00000620770 KIF20BQ96Q89 1820 aa18.52■□□□□ 0.56
MUC1-229ENST00000620770 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.56
MUC1-229ENST00000620770 KNSTRNQ9Y448 316 aa18.52■□□□□ 0.56
MUC1-229ENST00000620770 COG3Q96JB2 828 aa18.5■□□□□ 0.55
MUC1-229ENST00000620770 EP400Q96L91 3159 aa18.5■□□□□ 0.55
MUC1-229ENST00000620770 USP19O94966 1318 aa18.49■□□□□ 0.55
MUC1-229ENST00000620770 FYB1O15117 783 aa18.49■□□□□ 0.55
MUC1-229ENST00000620770 USP31Q70CQ4 1352 aa18.49■□□□□ 0.55
MUC1-229ENST00000620770 OVOS2A0A0J9YW53 1432 aa18.49■□□□□ 0.55
MUC1-229ENST00000620770 OVOS2Q6IE36 1432 aa18.49■□□□□ 0.55
MUC1-229ENST00000620770 ZBTB7CA1YPR0 619 aa18.48■□□□□ 0.55
MUC1-229ENST00000620770 VPS72Q15906 364 aa18.47■□□□□ 0.55
MUC1-229ENST00000620770 CCDC9Q9Y3X0 531 aaKnown RBP18.47■□□□□ 0.55
MUC1-229ENST00000620770 SLIT3O75094 1523 aa18.46■□□□□ 0.55
MUC1-229ENST00000620770 CC2D1BQ5T0F9 858 aaKnown RBP18.46■□□□□ 0.55
MUC1-229ENST00000620770 USP54Q70EL1 1684 aa18.45■□□□□ 0.54
MUC1-229ENST00000620770 PER1O15534 1290 aaPredicted RBP18.45■□□□□ 0.54
MUC1-229ENST00000620770 GCP02774 474 aa18.45■□□□□ 0.54
MUC1-229ENST00000620770 ZC3H6P61129 1189 aaKnown RBP18.45■□□□□ 0.54
MUC1-229ENST00000620770 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
MUC1-229ENST00000620770 AMER1Q5JTC6 1135 aaPredicted RBP18.44■□□□□ 0.54
MUC1-229ENST00000620770 NSD2O96028 1365 aa18.43■□□□□ 0.54
MUC1-229ENST00000620770 KIAA0232Q92628 1395 aa18.43■□□□□ 0.54
MUC1-229ENST00000620770 TNNT2P45379 298 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms